Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 367-532 |
| Cow position: | chr7:49893274-49893103 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 367-564 |
| Cow position: | chr7:15859576-15859355 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 371-564 |
| Cow position: | chr7:35752731-35752541 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 174, 58 |
| Conread position: | 371-607 |
| Cow position: | chr7:29620916-29620678 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 145 |
| Conread position: | 372-486 |
| Cow position: | chr7:34218151-34218033 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-521 |
| Cow position: | chr7:53406106-53406264 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-532 |
| Cow position: | chr7:42494477-42494311 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-535 |
| Cow position: | chr7:1666884-1667054 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 372-541 |
| Cow position: | chr7:37395722-37395908 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 372-551 |
| Cow position: | chr7:40942326-40942510 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 44, 143 |
| Conread position: | 372-552 |
| Cow position: | chr7:48047734-48047544 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 372-553 |
| Cow position: | chr7:69108087-69107897 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 151 |
| Conread position: | 372-562 |
| Cow position: | chr7:26698155-26697958 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 372-564 |
| Cow position: | chr7:10762656-10762857 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 372-564 |
| Cow position: | chr7:22188858-22188663 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 372-564 |
| Cow position: | chr7:23462408-23462215 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 372-564 |
| Cow position: | chr7:42555429-42555630 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 372-564 |
| Cow position: | chr7:57273010-57272818 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 372-564 |
| Cow position: | chr7:66150220-66150418 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 372-566 |
| Cow position: | chr7:32017225-32017429 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 373-560 |
| Cow position: | chr7:49754821-49754618 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 147 |
| Conread position: | 374-541 |
| Cow position: | chr7:5674344-5674512 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 374-552 |
| Cow position: | chr7:18428496-18428310 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 374-564 |
| Cow position: | chr7:37406116-37406307 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 374-575 |
| Cow position: | chr7:22647857-22647652 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 40, 203 |
| Conread position: | 374-637 |
| Cow position: | chr7:54787866-54787607 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 375-561 |
| Cow position: | chr7:2577003-2577194 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 375-564 |
| Cow position: | chr7:20832692-20832882 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 376-533 |
| Cow position: | chr7:67114027-67113862 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 376-534 |
| Cow position: | chr7:22341708-22341545 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 376-564 |
| Cow position: | chr7:44666725-44666910 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 376-567 |
| Cow position: | chr7:53415272-53415079 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 377-552 |
| Cow position: | chr7:239100-238908 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 379-552 |
| Cow position: | chr7:31611166-31611343 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 381-495 |
| Cow position: | chr7:31594490-31594370 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 381-561 |
| Cow position: | chr7:29128695-29128518 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 382-564 |
| Cow position: | chr7:26828060-26827873 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 383-557 |
| Cow position: | chr7:20247547-20247729 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 390-578 |
| Cow position: | chr7:52446984-52446788 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 398-561 |
| Cow position: | chr7:46797196-46797363 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.