Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 339-552 |
| Cow position: | chr8:18791367-18791156 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 342-549 |
| Cow position: | chr8:53887016-53887230 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 348-549 |
| Cow position: | chr8:26397787-26397580 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 367-539 |
| Cow position: | chr8:18984525-18984344 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 369-495 |
| Cow position: | chr8:21130220-21130354 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 369-532 |
| Cow position: | chr8:51919840-51919669 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 371-564 |
| Cow position: | chr8:19362731-19362928 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 371-567 |
| Cow position: | chr8:1506913-1506709 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 372-500 |
| Cow position: | chr8:12533152-12533023 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 372-530 |
| Cow position: | chr8:19498076-19497903 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 372-532 |
| Cow position: | chr8:23849912-23850077 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 372-533 |
| Cow position: | chr8:5185900-5186067 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 372-544 |
| Cow position: | chr8:4999402-4999578 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 372-552 |
| Cow position: | chr8:17128798-17128619 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 372-552 |
| Cow position: | chr8:39097740-39097554 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 372-560 |
| Cow position: | chr8:34396070-34396261 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 372-561 |
| Cow position: | chr8:26195066-26194877 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 372-561 |
| Cow position: | chr8:43399010-43398817 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 130 |
| Conread position: | 372-561 |
| Cow position: | chr8:49392955-49392765 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 372-564 |
| Cow position: | chr8:16497308-16497111 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 372-564 |
| Cow position: | chr8:21945805-21946004 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-564 |
| Cow position: | chr8:26158505-26158701 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 372-564 |
| Cow position: | chr8:59472801-59472605 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 168 |
| Conread position: | 372-565 |
| Cow position: | chr8:43974646-43974452 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 373-510 |
| Cow position: | chr8:26867694-26867839 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 373-564 |
| Cow position: | chr8:30473822-30473631 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 373-597 |
| Cow position: | chr8:31288882-31288654 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 374-561 |
| Cow position: | chr8:51588231-51588044 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 375-546 |
| Cow position: | chr8:5503732-5503910 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 376-536 |
| Cow position: | chr8:22227206-22227036 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 376-551 |
| Cow position: | chr8:31495191-31495377 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 376-552 |
| Cow position: | chr8:59727967-59728149 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 379-527 |
| Cow position: | chr8:32513662-32513809 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 130 |
| Conread position: | 382-578 |
| Cow position: | chr8:24106377-24106578 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 382-598 |
| Cow position: | chr8:41411619-41411831 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 383-565 |
| Cow position: | chr8:26928853-26928663 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 400-577 |
| Cow position: | chr8:29559637-29559824 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 403-551 |
| Cow position: | chr8:28383050-28383199 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 413-564 |
| Cow position: | chr8:42399282-42399122 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 95 |
Show alignments to all cow chromosomes.