Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 310-561 |
| Cow position: | chr9:16252991-16253243 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 342-564 |
| Cow position: | chr9:31968895-31969126 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 366-540 |
| Cow position: | chr9:20602969-20603151 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 154 |
| Conread position: | 369-548 |
| Cow position: | chr9:40859737-40859547 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 371-518 |
| Cow position: | chr9:53532130-53532284 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 372-491 |
| Cow position: | chr9:23740749-23740624 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-533 |
| Cow position: | chr9:47447710-47447539 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 372-552 |
| Cow position: | chr9:18577255-18577067 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 372-552 |
| Cow position: | chr9:32688835-32689021 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 372-561 |
| Cow position: | chr9:55262593-55262789 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 42, 145 |
| Conread position: | 372-564 |
| Cow position: | chr9:35224606-35224405 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 372-564 |
| Cow position: | chr9:38350245-38350047 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 372-570 |
| Cow position: | chr9:41904093-41903898 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 372-571 |
| Cow position: | chr9:12890156-12889951 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 372-577 |
| Cow position: | chr9:32728583-32728794 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 150 |
| Conread position: | 372-588 |
| Cow position: | chr9:39236514-39236730 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 373-566 |
| Cow position: | chr9:31341043-31340850 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 375-561 |
| Cow position: | chr9:51159698-51159505 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 177 |
| Conread position: | 375-564 |
| Cow position: | chr9:37256187-37255983 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 376-532 |
| Cow position: | chr9:59588474-59588312 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 376-541 |
| Cow position: | chr9:26353254-26353433 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 376-559 |
| Cow position: | chr9:47022491-47022688 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 376-570 |
| Cow position: | chr9:54319334-54319533 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 377-547 |
| Cow position: | chr9:10150069-10150245 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 379-564 |
| Cow position: | chr9:3204110-3203915 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-530 |
| Cow position: | chr9:49001910-49001753 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 382-551 |
| Cow position: | chr9:39646961-39646781 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 382-564 |
| Cow position: | chr9:47073709-47073895 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 382-564 |
| Cow position: | chr9:56740538-56740719 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 393-537 |
| Cow position: | chr9:34937523-34937377 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 551-670 |
| Cow position: | chr9:35598302-35598420 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 556-670 |
| Cow position: | chr9:35598303-35598416 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.