Cow genome map


           Conread name:
           Ss1.1-rspl24_p14.5
        

               Conread position:
               1-334
               

               Cow position:
               chr1:1999750-1999417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 79
               

               Conread position:
               1-573
               

               Cow position:
               chr1:2000170-1999598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               344
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-573
               

               Cow position:
               chr1:2000001-1999430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               219, 225
               

               Conread position:
               8-239
               

               Cow position:
               chr1:1999659-1999428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               25-542
               

               Cow position:
               chr1:2000230-1999713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               90-554
               

               Cow position:
               chr1:2000249-1999785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               306, 310
               

               Conread position:
               193-592
               

               Cow position:
               chr1:2000230-1999831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               375, 369
               

               Conread position:
               250-555
               

               Cow position:
               chr1:2000257-1999952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.