Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-470 |
| Cow position: | chr13:56333799-56334277 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 1-507 |
| Cow position: | chr13:39930647-39931153 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 1-532 |
| Cow position: | chr13:24162906-24163435 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 1-533 |
| Cow position: | chr13:22124760-22125292 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 299 |
| Conread position: | 1-574 |
| Cow position: | chr13:22125264-22125837 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 1-574 |
| Cow position: | chr13:24162990-24163563 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 1-575 |
| Cow position: | chr13:22124844-22125418 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 213, 224 |
| Conread position: | 1-575 |
| Cow position: | chr13:24162570-24163144 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 353 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 1-585 |
| Cow position: | chr13:39984319-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 220 |
| Conread position: | 1-593 |
| Cow position: | chr13:22125012-22125604 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 1-593 |
| Cow position: | chr13:24162738-24163330 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 1-593 |
| Cow position: | chr13:39984235-39984827 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 356 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 1-598 |
| Cow position: | chr13:24162486-24163083 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 1-642 |
| Cow position: | chr13:22124928-22125571 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 383 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 1-643 |
| Cow position: | chr13:24162654-24163298 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 3-593 |
| Cow position: | chr13:39984069-39984659 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 481, 469 |
| Conread position: | 12-574 |
| Cow position: | chr13:22124687-22125249 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 346 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 217, 221 |
| Conread position: | 12-574 |
| Cow position: | chr13:24162413-24162975 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 342 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 217, 221 |
| Conread position: | 63-532 |
| Cow position: | chr13:56333525-56333994 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 63-562 |
| Cow position: | chr13:24162884-24163383 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-565 |
| Cow position: | chr13:22125158-22125658 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 492, 0 |
| Conread position: | 64-466 |
| Cow position: | chr13:22125495-22125897 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 172, 178 |
| Conread position: | 64-466 |
| Cow position: | chr13:24163221-24163623 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 303, 314 |
| Conread position: | 67-574 |
| Cow position: | chr13:39930629-39931136 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 153 |
| Conread position: | 76-593 |
| Cow position: | chr13:39983974-39984491 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 109-587 |
| Cow position: | chr13:56292332-56291865 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 109-684 |
| Cow position: | chr13:39930587-39931162 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 351 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 116, 111 |
| Conread position: | 192-645 |
| Cow position: | chr13:39930586-39931040 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 264-637 |
| Cow position: | chr13:22124687-22125062 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 264-637 |
| Cow position: | chr13:24162413-24162788 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 300, 304 |
| Conread position: | 264-723 |
| Cow position: | chr13:39930574-39931039 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 203, 211 |
| Conread position: | 813-989 |
| Cow position: | chr13:31665212-31665398 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 169 |
Show alignments to all cow chromosomes.