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Cow genome map

           
Conread name:
           
Ss1.1-rspl24_p14.5
        

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:33063843-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
146, 136
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:51367508-51367216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:51765239-51764947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr18:42744126-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
289, 280
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr18:40075362-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr18:50282013-50282358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 124
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:43048725-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:49022901-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:50295443-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
228, 206
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:56316640-56317014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
224, 219
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr18:33092683-33092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr18:33092851-33092474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:42837513-42837122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:52011936-52011518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:14453285-14452858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:44397932-44397505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 108
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr18:42792479-42792908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr18:43168131-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr18:51400787-51401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:50058864-50058415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:55066855-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
302, 316
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:50246332-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
127, 138
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:50281845-50282305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr18:42744294-42743833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr18:42827407-42827872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
294, 301
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr18:40075194-40075663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr18:51789134-51788665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
315, 310
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr18:51812377-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
223, 233
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr18:44253804-44253334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
414, 0
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:42984969-42984493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:56316472-56316970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:53498480-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:55497535-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr18:33064095-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 149
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:41948841-41948332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 141
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:42792395-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40324797-40324286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
193, 187
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50271632-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:50059116-50058602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
224, 220
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:56316220-56316735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 128
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:49022733-49023254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
103, 109
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:43093415-43092880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:54979647-54980182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
195, 208
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr18:42675318-42674782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr18:53635537-53635002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr18:52012104-52011567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:1418089-1418629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:42837681-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:42985473-42984933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 125
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:44154451-44153908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:50059536-50058995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:51367760-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:51766079-51765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:56128292-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr18:50099230-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr18:53610380-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr18:53635705-53635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr18:56128460-56129002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr18:33064179-33063636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr18:42960296-42959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr18:44154196-44153658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr18:50848758-50849301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:42791891-42792435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:50246164-50246708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:51368347-51367804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr18:33064599-33064054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr18:51812461-51811916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 149
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr18:41197998-41198544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
135, 147
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr18:42693961-42693415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr18:41198166-41198713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr18:43093583-43093036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr18:50083705-50084253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr18:51969512-51970053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr18:40306424-40306976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr18:50030979-50030411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr18:56329680-56329107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 477
               

               
Conread position:
               
1-576
               

               
Cow position:
               
chr18:50022316-50021738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:43022564-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:44240264-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:44398100-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:51400619-51401199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 216
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:53498222-53498807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:40306760-40307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:42724501-42723920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 233
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:56316304-56316885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:56316388-56316969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:40086601-40086013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 225
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:42792311-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:49032623-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:55523563-55524147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:1418005-1418591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
216, 233
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:14453933-14453347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:49033211-49032625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:51752164-51751578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:53509325-53509911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:53610296-53609710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:55017967-55018553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 208
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:55523731-55524317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:56329428-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 471
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:33064935-33064343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:40324713-40324121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:41198082-41198674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:42791723-42792315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
221, 231
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:42791975-42792567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 232
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:44154280-44153695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
305, 294
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:49032875-49032283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:49033127-49032535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 471
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:50022148-50021550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:50059200-50058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:50083537-50084129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:50098978-50099570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:50848506-50849098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:52012188-52011596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:56316052-56316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:56316136-56316728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 283
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:56329512-56328920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:56329932-56329340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
1-595
               

               
Cow position:
               
chr18:50083453-50084047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr18:42837765-42837168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr18:42985305-42984708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:44184547-44183949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:56128544-56129141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
588, 0
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr18:42674982-42674383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr18:52428392-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr18:52433573-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:51368431-51367817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:51400535-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr18:43175101-43174481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr18:52012356-52011731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:49033295-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 301
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:52428224-52428850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:52433405-52434031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52012439-52011813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52427888-52428515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
212, 232
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52427972-52428599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52428056-52428683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52433153-52433780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr18:52433237-52433864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:33064515-33063887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:42985221-42984593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 124
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:43022816-43022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:43175521-43174893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:44184631-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 298
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:44240096-44240724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
134, 119
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:52447447-52448075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr18:43093907-43093290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
575, 188
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr18:44239760-44240390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:43120236-43119605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:51400451-51401082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:51812881-51812250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 149
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:52447111-52447742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:52447531-52448162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:52447279-52447911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:52447699-52448332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:56329764-56329132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:56329848-56329216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 303
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:42791639-42792277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:42792227-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:50848842-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
575, 585
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:56247726-56247098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 109
               

               
Conread position:
               
1-640
               

               
Cow position:
               
chr18:42791219-42791860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
588, 0
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:41949009-41948366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:43167879-43168522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 109
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:49032707-49032064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 149
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:49032791-49032148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:50059620-50058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
198, 215
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:51789386-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:52428308-52428951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:52433489-52434132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:41949261-41948617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 142
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:42744546-42743902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:42985389-42984745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:43120152-43119508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:44184883-44184239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 128
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:44239928-44240572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
592, 0
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:44240180-44240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:44398184-44397540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 232
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:44398352-44397708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:51874066-51874703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:52433321-52433965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chr18:56247988-56247342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
105, 93
               

               
Conread position:
               
1-644
               

               
Cow position:
               
chr18:41197830-41198474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
1-647
               

               
Cow position:
               
chr18:42960044-42959405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
1-679
               

               
Cow position:
               
chr18:42791807-42792488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
1-679
               

               
Cow position:
               
chr18:50246080-50246761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
1-685
               

               
Cow position:
               
chr18:40324629-40323942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
147, 142
               

               
Conread position:
               
1-692
               

               
Cow position:
               
chr18:51839474-51838781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
1-694
               

               
Cow position:
               
chr18:51789722-51789025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 149
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr18:49033043-49032341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 285
               

               
Conread position:
               
1-700
               

               
Cow position:
               
chr18:42837933-42837228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:42744630-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 126
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:42960212-42959512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:43023068-43022359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:51368095-51367387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:33064851-33064141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:41949345-41948635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:42792059-42792769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 377
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:43167795-43168505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:51789554-51788844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 200
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:53635957-53635247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 402
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:56128376-56129086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:56330184-56329469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 306
               

               
Conread position:
               
1-711
               

               
Cow position:
               
chr18:42675234-42674518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:42744714-42743997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 126
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:42791051-42791768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:51812797-51812080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:52447615-52448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr18:41197578-41198297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:14454016-14453502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
2-535
               

               
Cow position:
               
chr18:42693792-42693259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
231, 226
               

               
Conread position:
               
2-592
               

               
Cow position:
               
chr18:50049135-50048545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 124
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr18:49033378-49032787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:51368514-51367890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
2-626
               

               
Cow position:
               
chr18:52427637-52428263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 103
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr18:52447028-52447659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr18:52447364-52447995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
2-639
               

               
Cow position:
               
chr18:43093498-43092859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 302
               

               
Conread position:
               
2-642
               

               
Cow position:
               
chr18:50848253-50848897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
2-643
               

               
Cow position:
               
chr18:43175268-43174625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
2-643
               

               
Cow position:
               
chr18:52432986-52433629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 103
               

               
Conread position:
               
2-646
               

               
Cow position:
               
chr18:42724584-42723938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 230
               

               
Conread position:
               
2-686
               

               
Cow position:
               
chr18:50848423-50849109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:44398435-44397728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 295
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr18:53586322-53585949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:42724331-42723910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:42790969-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:43167965-43168506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr18:40306258-40306803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
3-585
               

               
Cow position:
               
chr18:40075110-40075694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr18:53610462-53609872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr18:53636039-53635449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 390
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr18:56128126-56128721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 320
               

               
Conread position:
               
3-626
               

               
Cow position:
               
chr18:52427722-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
145, 139
               

               
Conread position:
               
3-626
               

               
Cow position:
               
chr18:52433071-52433696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 139
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr18:33093101-33092474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 140
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr18:51765573-51764946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
3-630
               

               
Cow position:
               
chr18:52446945-52447574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 127
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr18:51765320-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
4-515
               

               
Cow position:
               
chr18:42693538-42693028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 69
               

               
Conread position:
               
4-543
               

               
Cow position:
               
chr18:43093664-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
4-582
               

               
Cow position:
               
chr18:40075029-40075607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
4-586
               

               
Cow position:
               
chr18:49021492-49022071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
4-625
               

               
Cow position:
               
chr18:51368597-51367974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
4-643
               

               
Cow position:
               
chr18:41949090-41948449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
4-684
               

               
Cow position:
               
chr18:51969113-51969777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
6-593
               

               
Cow position:
               
chr18:41948920-41948333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
7-470
               

               
Cow position:
               
chr18:56494021-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
7-544
               

               
Cow position:
               
chr18:42724663-42724126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
7-544
               

               
Cow position:
               
chr18:53610542-53610005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
7-582
               

               
Cow position:
               
chr18:56391422-56390847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
387, 392
               

               
Conread position:
               
7-598
               

               
Cow position:
               
chr18:53586654-53586063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
142, 113
               

               
Conread position:
               
7-615
               

               
Cow position:
               
chr18:51813043-51812435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 155
               

               
Conread position:
               
7-693
               

               
Cow position:
               
chr18:51752326-51751638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
9-543
               

               
Cow position:
               
chr18:55497695-55497161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
9-593
               

               
Cow position:
               
chr18:56128048-56128632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
10-598
               

               
Cow position:
               
chr18:55523320-55523908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 298
               

               
Conread position:
               
11-677
               

               
Cow position:
               
chr18:51400293-51400962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 205
               

               
Conread position:
               
11-710
               

               
Cow position:
               
chr18:51400377-51401082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
13-533
               

               
Cow position:
               
chr18:43093736-43093219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
13-587
               

               
Cow position:
               
chr18:53497987-53498561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
13-630
               

               
Cow position:
               
chr18:51789626-51789007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
13-704
               

               
Cow position:
               
chr18:43175593-43174896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 129
               

               
Conread position:
               
14-581
               

               
Cow position:
               
chr18:50295204-50295771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
15-480
               

               
Cow position:
               
chr18:51969608-51970064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
302, 196
               

               
Conread position:
               
15-587
               

               
Cow position:
               
chr18:42675388-42674816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
20-672
               

               
Cow position:
               
chr18:42693858-42693204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
292, 297
               

               
Conread position:
               
22-426
               

               
Cow position:
               
chr18:56267520-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-544
               

               
Cow position:
               
chr18:50848611-50849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
22-630
               

               
Cow position:
               
chr18:56493868-56494478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
23-592
               

               
Cow position:
               
chr18:53559699-53560268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
51-597
               

               
Cow position:
               
chr18:54967926-54968470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr18:54967257-54967724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
163, 158
               

               
Conread position:
               
53-545
               

               
Cow position:
               
chr18:50022434-50021937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
54-642
               

               
Cow position:
               
chr18:50245965-50246555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
56-508
               

               
Cow position:
               
chr18:55018358-55018811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
59-506
               

               
Cow position:
               
chr18:53509216-53509662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
60-460
               

               
Cow position:
               
chr18:50099625-50100025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
60-471
               

               
Cow position:
               
chr18:50848733-50849144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
167, 173
               

               
Conread position:
               
60-545
               

               
Cow position:
               
chr18:50048909-50048424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
404, 385
               

               
Conread position:
               
60-582
               

               
Cow position:
               
chr18:53525922-53526444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 141
               

               
Conread position:
               
60-596
               

               
Cow position:
               
chr18:50281820-50282356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 253
               

               
Conread position:
               
60-601
               

               
Cow position:
               
chr18:50271439-50271982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
153, 163
               

               
Conread position:
               
60-618
               

               
Cow position:
               
chr18:55008789-55009347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
60-626
               

               
Cow position:
               
chr18:44154476-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 420
               

               
Conread position:
               
60-671
               

               
Cow position:
               
chr18:40074917-40075531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
61-500
               

               
Cow position:
               
chr18:56316616-56317053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
402, 0
               

               
Conread position:
               
62-382
               

               
Cow position:
               
chr18:55442330-55442650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
153, 166
               

               
Conread position:
               
62-477
               

               
Cow position:
               
chr18:44239737-44240152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
230, 242
               

               
Conread position:
               
62-593
               

               
Cow position:
               
chr18:43167772-43168303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
189, 147
               

               
Conread position:
               
62-677
               

               
Cow position:
               
chr18:42791364-42791982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
63-512
               

               
Cow position:
               
chr18:53586430-53585981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
404, 400
               

               
Conread position:
               
63-571
               

               
Cow position:
               
chr18:56391450-56390942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
422, 409
               

               
Conread position:
               
63-582
               

               
Cow position:
               
chr18:22844304-22843782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
193, 242
               

               
Conread position:
               
63-582
               

               
Cow position:
               
chr18:49022711-49023230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 211
               

               
Conread position:
               
63-586
               

               
Cow position:
               
chr18:53559823-53560346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
63-587
               

               
Cow position:
               
chr18:53525757-53526281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
312, 326
               

               
Conread position:
               
63-587
               

               
Cow position:
               
chr18:53586514-53585990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
422, 415
               

               
Conread position:
               
63-587
               

               
Cow position:
               
chr18:54992717-54993241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 141
               

               
Conread position:
               
63-587
               

               
Cow position:
               
chr18:55067045-55066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
63-591
               

               
Cow position:
               
chr18:56391534-56391006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
63-592
               

               
Cow position:
               
chr18:55066961-55066432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
63-593
               

               
Cow position:
               
chr18:55066877-55066348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
63-630
               

               
Cow position:
               
chr18:53509303-53509872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
315, 326
               

               
Conread position:
               
63-630
               

               
Cow position:
               
chr18:53586850-53586281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
329, 309
               

               
Conread position:
               
63-642
               

               
Cow position:
               
chr18:54979457-54980038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
491, 485
               

               
Conread position:
               
63-643
               

               
Cow position:
               
chr18:44398458-44397876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
64-506
               

               
Cow position:
               
chr18:53560328-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
64-521
               

               
Cow position:
               
chr18:54992970-54993427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
64-521
               

               
Cow position:
               
chr18:55018198-55018655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
64-536
               

               
Cow position:
               
chr18:54980214-54980685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 167
               

               
Conread position:
               
64-536
               

               
Cow position:
               
chr18:54993474-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
64-536
               

               
Cow position:
               
chr18:55018282-55018755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
64-537
               

               
Cow position:
               
chr18:54992886-54993359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
64-582
               

               
Cow position:
               
chr18:54979962-54980480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
64-587
               

               
Cow position:
               
chr18:54967854-54968375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
230, 157
               

               
Conread position:
               
64-587
               

               
Cow position:
               
chr18:54993306-54993829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 79
               

               
Conread position:
               
64-587
               

               
Cow position:
               
chr18:55018114-55018637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
151, 147
               

               
Conread position:
               
64-592
               

               
Cow position:
               
chr18:50083684-50084212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
161, 152
               

               
Conread position:
               
64-614
               

               
Cow position:
               
chr18:50281740-50282292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
64-626
               

               
Cow position:
               
chr18:52432964-52433528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
64-633
               

               
Cow position:
               
chr18:1417984-1418554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 185
               

               
Conread position:
               
64-637
               

               
Cow position:
               
chr18:55008709-55009283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
64-645
               

               
Cow position:
               
chr18:42693982-42693400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
244, 230
               

               
Conread position:
               
64-648
               

               
Cow position:
               
chr18:51874045-51874625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
252, 114
               

               
Conread position:
               
64-666
               

               
Cow position:
               
chr18:42790946-42791549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
160, 140
               

               
Conread position:
               
64-667
               

               
Cow position:
               
chr18:54979878-54980484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
332, 337
               

               
Conread position:
               
64-704
               

               
Cow position:
               
chr18:44184904-44184259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
64-705
               

               
Cow position:
               
chr18:53636062-53635415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 347
               

               
Conread position:
               
64-712
               

               
Cow position:
               
chr18:50083348-50084002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 168
               

               
Conread position:
               
65-533
               

               
Cow position:
               
chr18:14454037-14453569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
353, 323
               

               
Conread position:
               
65-625
               

               
Cow position:
               
chr18:42985577-42985016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
66-593
               

               
Cow position:
               
chr18:42960315-42959788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
67-446
               

               
Cow position:
               
chr18:50058882-50058503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-631
               

               
Cow position:
               
chr18:51400181-51400747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
68-594
               

               
Cow position:
               
chr18:42827390-42827916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
69-458
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
69-505
               

               
Cow position:
               
chr18:40306912-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
329, 318
               

               
Conread position:
               
70-536
               

               
Cow position:
               
chr18:33093118-33092652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
70-582
               

               
Cow position:
               
chr18:53498465-53498977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
74-585
               

               
Cow position:
               
chr18:55497546-55497035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
74-705
               

               
Cow position:
               
chr18:53635716-53635079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 314
               

               
Conread position:
               
76-542
               

               
Cow position:
               
chr18:51766087-51765622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
76-587
               

               
Cow position:
               
chr18:55523302-55523813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr18:55067116-55066561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
77-587
               

               
Cow position:
               
chr18:56493839-56494349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
80-471
               

               
Cow position:
               
chr18:14453290-14452899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
232, 221
               

               
Conread position:
               
80-593
               

               
Cow position:
               
chr18:56316047-56316560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
213, 220
               

               
Conread position:
               
82-593
               

               
Cow position:
               
chr18:51400280-51400791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
85-627
               

               
Cow position:
               
chr18:40324881-40324337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
136, 149
               

               
Conread position:
               
86-716
               

               
Cow position:
               
chr18:50281678-50282310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
91-591
               

               
Cow position:
               
chr18:56391590-56391090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
304, 311
               

               
Conread position:
               
94-627
               

               
Cow position:
               
chr18:53559686-53560221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
94-643
               

               
Cow position:
               
chr18:51839549-51838998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr18:49021678-49022144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
109-587
               

               
Cow position:
               
chr18:56247786-56247316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
317, 286
               

               
Conread position:
               
109-598
               

               
Cow position:
               
chr18:49033355-49032866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
109-641
               

               
Cow position:
               
chr18:44253864-44253331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
148-541
               

               
Cow position:
               
chr18:50295254-50295647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
148-555
               

               
Cow position:
               
chr18:40306235-40306642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
257, 240
               

               
Conread position:
               
148-593
               

               
Cow position:
               
chr18:53610485-53610040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
169, 162
               

               
Conread position:
               
148-630
               

               
Cow position:
               
chr18:51969089-51969555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
250, 133
               

               
Conread position:
               
149-515
               

               
Cow position:
               
chr18:42694065-42693699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-470
               

               
Cow position:
               
chr18:56248165-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
160-477
               

               
Cow position:
               
chr18:43048734-43048417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
235, 242
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr18:50022496-50022138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
160-587
               

               
Cow position:
               
chr18:53509232-53509659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
160-593
               

               
Cow position:
               
chr18:56128115-56128548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
324, 309
               

               
Conread position:
               
160-627
               

               
Cow position:
               
chr18:53525686-53526155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
161-627
               

               
Cow position:
               
chr18:33064943-33064475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
432, 0
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr18:42744722-42744250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
434, 0
               

               
Conread position:
               
163-710
               

               
Cow position:
               
chr18:41949351-41948798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 493
               

               
Conread position:
               
164-547
               

               
Cow position:
               
chr18:14453290-14452907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
164-705
               

               
Cow position:
               
chr18:42675491-42674944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
166-540
               

               
Cow position:
               
chr18:50030982-50030610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
187, 46
               

               
Conread position:
               
168-593
               

               
Cow position:
               
chr18:1417920-1418345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
396, 401
               

               
Conread position:
               
175-598
               

               
Cow position:
               
chr18:41197500-41197923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-710
               

               
Cow position:
               
chr18:51839549-51839011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
192-587
               

               
Cow position:
               
chr18:53587057-53586662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
273, 283
               

               
Conread position:
               
192-593
               

               
Cow position:
               
chr18:55497680-55497279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
292, 280
               

               
Conread position:
               
193-715
               

               
Cow position:
               
chr18:50083309-50083837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
272, 267
               

               
Conread position:
               
205-677
               

               
Cow position:
               
chr18:50059668-50059193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
234-597
               

               
Cow position:
               
chr18:54967772-54968134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
326, 255
               

               
Conread position:
               
239-715
               

               
Cow position:
               
chr18:51789903-51789422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
243-576
               

               
Cow position:
               
chr18:56267467-56267134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
242, 235
               

               
Conread position:
               
243-643
               

               
Cow position:
               
chr18:51752341-51751940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
244-642
               

               
Cow position:
               
chr18:43048734-43048334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
244-671
               

               
Cow position:
               
chr18:56128115-56128545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
323, 309
               

               
Conread position:
               
248-712
               

               
Cow position:
               
chr18:53636046-53635576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
349, 397
               

               
Conread position:
               
255-555
               

               
Cow position:
               
chr18:53636124-53635823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
255-555
               

               
Cow position:
               
chr18:56128041-56128342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 218
               

               
Conread position:
               
265-704
               

               
Cow position:
               
chr18:51789794-51789350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
274-593
               

               
Cow position:
               
chr18:50083306-50083625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
321-643
               

               
Cow position:
               
chr18:43048741-43048417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
813-989
               

               
Cow position:
               
chr18:21685516-21685330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 169
               
Show alignments to all cow chromosomes.