Cow genome map
Conread name: | Ss1.1-rspl24_p14.5 |
Conread position: | 1-259 |
Cow position: | chr19:20635294-20635036 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 168 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 57 |
Conread position: | 1-338 |
Cow position: | chr19:14948380-14948043 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 213 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 126, 148 |
Conread position: | 1-428 |
Cow position: | chr19:14960138-14959713 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 267 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 255, 264 |
Conread position: | 1-460 |
Cow position: | chr19:23613771-23614230 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 291 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 42, 54 |
Conread position: | 1-461 |
Cow position: | chr19:20635546-20635086 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 282 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 213, 238 |
Conread position: | 1-498 |
Cow position: | chr19:14940579-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 307 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-510 |
Cow position: | chr19:23649977-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 311 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 25, 19 |
Conread position: | 1-515 |
Cow position: | chr19:20678290-20678801 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 320 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 53, 41 |
Conread position: | 1-536 |
Cow position: | chr19:14940075-14940610 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 58 |
Conread position: | 1-536 |
Cow position: | chr19:23613351-23613886 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 333 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 25, 19 |
Conread position: | 1-542 |
Cow position: | chr19:14940159-14940700 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 328 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-542 |
Cow position: | chr19:23614527-23615068 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 1-543 |
Cow position: | chr19:20677534-20678076 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 327 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 142, 146 |
Conread position: | 1-544 |
Cow position: | chr19:20635630-20635087 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 328 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 69, 33 |
Conread position: | 1-544 |
Cow position: | chr19:23649725-23650268 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 141 |
Conread position: | 1-587 |
Cow position: | chr19:23649893-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 58 |
Conread position: | 1-593 |
Cow position: | chr19:14940243-14940835 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 141 |
Conread position: | 1-593 |
Cow position: | chr19:23614023-23614615 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 362 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 148, 142 |
Conread position: | 1-593 |
Cow position: | chr19:23649473-23650065 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 146 |
Conread position: | 1-603 |
Cow position: | chr19:23597116-23597718 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 58 |
Conread position: | 1-610 |
Cow position: | chr19:14940495-14941105 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 373 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 137, 158 |
Conread position: | 1-615 |
Cow position: | chr19:23649641-23650255 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 355 |
Conread position: | 1-624 |
Cow position: | chr19:23649305-23649930 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 300 |
Conread position: | 1-627 |
Cow position: | chr19:23614359-23614987 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 61 |
Conread position: | 1-643 |
Cow position: | chr19:14940327-14940971 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 55 |
Conread position: | 1-643 |
Cow position: | chr19:43570379-43569745 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 388 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 37, 33 |
Conread position: | 1-677 |
Cow position: | chr19:23614191-23614870 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 44 |
Conread position: | 1-704 |
Cow position: | chr19:20677954-20678663 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 421 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 51, 33 |
Conread position: | 1-704 |
Cow position: | chr19:23613855-23614563 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 127 |
Conread position: | 1-705 |
Cow position: | chr19:14959566-14958871 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 424 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 1-705 |
Cow position: | chr19:23613519-23614229 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 61 |
Conread position: | 1-717 |
Cow position: | chr19:14960472-14959759 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 232 |
Conread position: | 2-548 |
Cow position: | chr19:23596868-23597411 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 102 |
Conread position: | 2-592 |
Cow position: | chr19:14960387-14959801 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 0 |
Conread position: | 2-597 |
Cow position: | chr19:14960303-14959712 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 364 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 28, 35 |
Conread position: | 4-670 |
Cow position: | chr19:23649812-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 34 |
Conread position: | 14-598 |
Cow position: | chr19:14940424-14941008 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 550, 555 |
Conread position: | 14-629 |
Cow position: | chr19:20677631-20678248 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 376 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 29 |
Conread position: | 63-343 |
Cow position: | chr19:14959588-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 179 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-587 |
Cow position: | chr19:14940053-14940577 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-601 |
Cow position: | chr19:20677512-20678052 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 325 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 41, 47 |
Conread position: | 63-612 |
Cow position: | chr19:43570243-43569694 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 326 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 86, 76 |
Conread position: | 64-469 |
Cow position: | chr19:14948401-14947996 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 247 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 85, 79 |
Conread position: | 64-593 |
Cow position: | chr19:23597095-23597624 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 146 |
Conread position: | 69-542 |
Cow position: | chr19:20635646-20635173 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 285 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 65, 56 |
Conread position: | 77-643 |
Cow position: | chr19:23649297-23649865 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 224 |
Conread position: | 148-643 |
Cow position: | chr19:23597095-23597592 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 459, 0 |
Conread position: | 160-477 |
Cow position: | chr19:14959164-14958855 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 198 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 160-627 |
Cow position: | chr19:20635639-20635170 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 286 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 54, 74 |
Conread position: | 162-631 |
Cow position: | chr19:14948470-14948000 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 284 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 322, 71 |
Conread position: | 166-624 |
Cow position: | chr19:14939988-14940448 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 285 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 422, 0 |
Conread position: | 169-643 |
Cow position: | chr19:23613351-23613827 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 292 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 438, 0 |
Conread position: | 170-712 |
Cow position: | chr19:23596868-23597413 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 326 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 437, 165 |
Conread position: | 243-598 |
Cow position: | chr19:14948471-14948119 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 213 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 244-511 |
Cow position: | chr19:14959575-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 178 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 68, 73 |
Conread position: | 813-989 |
Cow position: | chr19:2881119-2881305 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 143 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 169 |
Conread position: | 813-989 |
Cow position: | chr19:28794306-28794119 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 147 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 56, 170 |
Conread position: | 813-989 |
Cow position: | chr19:30777422-30777236 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 61, 169 |
Show alignments to all cow chromosomes.