Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-302 |
| Cow position: | chr2:48689373-48689072 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 1-365 |
| Cow position: | chr2:48689456-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-458 |
| Cow position: | chr2:86465435-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 108 |
| Conread position: | 1-500 |
| Cow position: | chr2:82799947-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 1-515 |
| Cow position: | chr2:78755336-78755847 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 1-533 |
| Cow position: | chr2:5874929-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 1-533 |
| Cow position: | chr2:5875013-5874481 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-586 |
| Cow position: | chr2:82799863-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 1-598 |
| Cow position: | chr2:82799779-82800376 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-642 |
| Cow position: | chr2:78754917-78755558 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 1-642 |
| Cow position: | chr2:82799527-82800170 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 1-712 |
| Cow position: | chr2:82799611-82800328 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 3-517 |
| Cow position: | chr2:78754835-78755350 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 302 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 4-509 |
| Cow position: | chr2:48689538-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 7-542 |
| Cow position: | chr2:86465357-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 22-715 |
| Cow position: | chr2:5875160-5874461 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 405 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 119 |
| Conread position: | 25-548 |
| Cow position: | chr2:82799467-82799990 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 117 |
| Conread position: | 43-671 |
| Cow position: | chr2:82799401-82800032 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 69-536 |
| Cow position: | chr2:86465167-86465634 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 69-544 |
| Cow position: | chr2:86465335-86465810 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 397, 405 |
| Conread position: | 75-549 |
| Cow position: | chr2:86465761-86466233 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 182, 173 |
| Conread position: | 76-574 |
| Cow position: | chr2:78754824-78755322 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 153, 161 |
| Conread position: | 84-544 |
| Cow position: | chr2:48689541-48689082 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 65, 44 |
| Conread position: | 168-552 |
| Cow position: | chr2:48689541-48689158 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 253-595 |
| Cow position: | chr2:48689540-48689199 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 813-989 |
| Cow position: | chr2:56301375-56301561 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 169 |
| Conread position: | 813-989 |
| Cow position: | chr2:59657772-59657586 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 169 |
Show alignments to all cow chromosomes.