Cow genome map
Conread name: | Ss1.1-rspl24_p14.5 |
Conread position: | 1-268 |
Cow position: | chr23:24654118-24654385 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 179 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 147, 141 |
Conread position: | 1-291 |
Cow position: | chr23:24535708-24535417 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 184 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 148, 142 |
Conread position: | 1-330 |
Cow position: | chr23:25724042-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 223 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 44, 52 |
Conread position: | 1-392 |
Cow position: | chr23:24639721-24640112 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 251 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-393 |
Cow position: | chr23:24522567-24522175 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 251 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 316, 303 |
Conread position: | 1-429 |
Cow position: | chr23:25660320-25660748 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 273 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 37, 33 |
Conread position: | 1-431 |
Cow position: | chr23:24626309-24626739 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 275 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 1-464 |
Cow position: | chr23:25660236-25660699 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-477 |
Cow position: | chr23:25698571-25698095 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 291 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 248, 263 |
Conread position: | 1-497 |
Cow position: | chr23:24535960-24535464 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 296 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-510 |
Cow position: | chr23:24560637-24560128 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 1-510 |
Cow position: | chr23:25626535-25627041 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-512 |
Cow position: | chr23:24639553-24640064 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 33 |
Conread position: | 1-585 |
Cow position: | chr23:24547245-24546661 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 52 |
Conread position: | 1-593 |
Cow position: | chr23:24547329-24546737 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 108 |
Conread position: | 1-593 |
Cow position: | chr23:24639469-24640061 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 1-630 |
Cow position: | chr23:24522814-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 373 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 192, 30 |
Conread position: | 1-643 |
Cow position: | chr23:25626283-25626924 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 238 |
Conread position: | 1-712 |
Cow position: | chr23:24560889-24560172 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 210 |
Conread position: | 1-712 |
Cow position: | chr23:24639301-24640018 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 55 |
Conread position: | 2-341 |
Cow position: | chr23:24535791-24535452 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 211 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 223, 218 |
Conread position: | 4-465 |
Cow position: | chr23:24535873-24535411 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 419, 411 |
Conread position: | 4-596 |
Cow position: | chr23:24560718-24560125 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 139 |
Conread position: | 4-632 |
Cow position: | chr23:24536041-24535410 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 364 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 578, 0 |
Conread position: | 4-693 |
Cow position: | chr23:24639388-24640081 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 52 |
Conread position: | 7-625 |
Cow position: | chr23:25626121-25626737 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 373 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 477, 462 |
Conread position: | 9-283 |
Cow position: | chr23:24654042-24654316 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 179 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-630 |
Cow position: | chr23:24639226-24639848 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 43 |
Conread position: | 11-414 |
Cow position: | chr23:25724116-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 98 |
Conread position: | 11-548 |
Cow position: | chr23:25660162-25660699 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-631 |
Cow position: | chr23:25625961-25626579 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 362 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 40, 46 |
Conread position: | 51-464 |
Cow position: | chr23:24522601-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 263 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 26, 19 |
Conread position: | 64-548 |
Cow position: | chr23:24522669-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 297 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 232, 64 |
Conread position: | 64-548 |
Cow position: | chr23:25626514-25626995 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 310 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 11, 7 |
Conread position: | 64-582 |
Cow position: | chr23:25698592-25698074 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 311 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 160, 170 |
Conread position: | 75-704 |
Cow position: | chr23:24560897-24560265 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 34 |
Conread position: | 78-520 |
Cow position: | chr23:24626302-24626744 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 401 |
Conread position: | 78-630 |
Cow position: | chr23:25660145-25660699 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 65 |
Conread position: | 85-710 |
Cow position: | chr23:24639217-24639848 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 374 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 164, 175 |
Conread position: | 95-593 |
Cow position: | chr23:24536034-24535536 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 139 |
Conread position: | 108-393 |
Cow position: | chr23:24654057-24654342 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 53, 35 |
Conread position: | 109-512 |
Cow position: | chr23:25724102-25723700 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 255 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 391, 0 |
Conread position: | 155-696 |
Cow position: | chr23:24522828-24522286 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 325 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 73, 41 |
Conread position: | 162-582 |
Cow position: | chr23:24626302-24626722 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 166-587 |
Cow position: | chr23:25626028-25626449 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 261 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 318, 307 |
Conread position: | 170-523 |
Cow position: | chr23:24654034-24654388 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 222 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 188-542 |
Cow position: | chr23:25724107-25723753 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 230 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 25, 16 |
Conread position: | 243-631 |
Cow position: | chr23:24536054-24535664 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 232 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 188, 177 |
Conread position: | 246-643 |
Cow position: | chr23:24626302-24626701 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 245 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 347, 0 |
Conread position: | 253-705 |
Cow position: | chr23:24547329-24546871 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 286 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 340, 406 |
Conread position: | 263-644 |
Cow position: | chr23:25724116-25723733 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 35, 20 |
Show alignments to all cow chromosomes.