Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-266 |
| Cow position: | chr24:17013248-17013513 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1-432 |
| Cow position: | chr24:17070627-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-505 |
| Cow position: | chr24:17070543-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 313 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 219, 226 |
| Conread position: | 1-582 |
| Cow position: | chr24:17035622-17035041 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 1-593 |
| Cow position: | chr24:17036462-17035870 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-598 |
| Cow position: | chr24:17036378-17035781 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 1-601 |
| Cow position: | chr24:17035538-17034937 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 142 |
| Conread position: | 1-615 |
| Cow position: | chr24:17035706-17035092 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 128 |
| Conread position: | 1-629 |
| Cow position: | chr24:17035790-17035160 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 1-630 |
| Cow position: | chr24:17036126-17035495 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 201 |
| Conread position: | 1-631 |
| Cow position: | chr24:17035874-17035242 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 381 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 1-631 |
| Cow position: | chr24:17036546-17035914 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 1-632 |
| Cow position: | chr24:17078093-17077461 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 598, 622 |
| Conread position: | 1-642 |
| Cow position: | chr24:17078345-17077702 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 1-677 |
| Cow position: | chr24:17036294-17035615 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 210 |
| Conread position: | 1-679 |
| Cow position: | chr24:17036042-17035361 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 142 |
| Conread position: | 2-343 |
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-643 |
| Cow position: | chr24:17036617-17035986 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 64-574 |
| Cow position: | chr24:17070522-17071032 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 64-630 |
| Cow position: | chr24:17078114-17077546 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 519, 0 |
| Conread position: | 95-301 |
| Cow position: | chr24:16986440-16986646 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 109-393 |
| Cow position: | chr24:17013188-17013472 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 146-712 |
| Cow position: | chr24:17078368-17077796 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 335, 327 |
| Conread position: | 164-598 |
| Cow position: | chr24:17070454-17070888 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-511 |
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 254-471 |
| Cow position: | chr24:16986431-16986648 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-536 |
| Cow position: | chr24:17013178-17013447 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 126 |
| Conread position: | 335-630 |
| Cow position: | chr24:17013162-17013459 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 149, 137 |
Show alignments to all cow chromosomes.