Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-176 |
| Cow position: | chr28:33210480-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-392 |
| Cow position: | chr28:33210228-33210620 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 1-432 |
| Cow position: | chr28:9253187-9253619 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 141, 147 |
| Conread position: | 1-437 |
| Cow position: | chr28:7758324-7758760 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 1-499 |
| Cow position: | chr28:7757836-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 1-506 |
| Cow position: | chr28:34696080-34696585 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 1-521 |
| Cow position: | chr28:11334053-11333533 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 387 |
| Conread position: | 1-543 |
| Cow position: | chr28:11333885-11333349 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 404, 0 |
| Conread position: | 1-582 |
| Cow position: | chr28:9253019-9253600 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 217 |
| Conread position: | 1-582 |
| Cow position: | chr28:34695996-34696577 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 1-593 |
| Cow position: | chr28:7757584-7758176 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 346 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1-593 |
| Cow position: | chr28:11334137-11333545 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 358 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 142, 149 |
| Conread position: | 1-631 |
| Cow position: | chr28:34695912-34696544 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 1-677 |
| Cow position: | chr28:7757416-7758095 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 401 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 2-712 |
| Cow position: | chr28:34695829-34696545 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 3-574 |
| Cow position: | chr28:7757334-7757905 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 336 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 146, 140 |
| Conread position: | 4-482 |
| Cow position: | chr28:11333966-11333486 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 313, 300 |
| Conread position: | 4-582 |
| Cow position: | chr28:7757755-7758333 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 339 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 286, 303 |
| Conread position: | 8-548 |
| Cow position: | chr28:34673362-34673902 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 324 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 47-664 |
| Cow position: | chr28:7810235-7810835 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 364 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 268, 50 |
| Conread position: | 53-549 |
| Cow position: | chr28:9290141-9290630 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 7 |
| Conread position: | 68-671 |
| Cow position: | chr28:11334154-11333548 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 146, 159 |
| Conread position: | 68-712 |
| Cow position: | chr28:34695811-34696461 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 70-631 |
| Cow position: | chr28:9253004-9253567 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 338 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 109-507 |
| Cow position: | chr28:33210252-33210653 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 189 |
| Conread position: | 165-514 |
| Cow position: | chr28:9299217-9299566 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 151 |
| Conread position: | 166-643 |
| Cow position: | chr28:7757413-7757892 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 169-583 |
| Cow position: | chr28:33210228-33210643 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 315, 303 |
| Conread position: | 170-548 |
| Cow position: | chr28:34673356-34673734 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 250-712 |
| Cow position: | chr28:7757413-7757881 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 52 |
Show alignments to all cow chromosomes.