Cow genome map

Conread name: Ss1.1-rspl24_p14.5

Conread position: 1-176
Cow position: chr28:33210480-33210656 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 1-392
Cow position: chr28:33210228-33210620 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 1-432
Cow position: chr28:9253187-9253619 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 271
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 141, 147

Conread position: 1-437
Cow position: chr28:7758324-7758760 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 141

Conread position: 1-499
Cow position: chr28:7757836-7758334 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 295
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 54

Conread position: 1-506
Cow position: chr28:34696080-34696585 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 1-521
Cow position: chr28:11334053-11333533 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 387

Conread position: 1-543
Cow position: chr28:11333885-11333349 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 322
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 404, 0

Conread position: 1-582
Cow position: chr28:9253019-9253600 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 217

Conread position: 1-582
Cow position: chr28:34695996-34696577 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-593
Cow position: chr28:7757584-7758176 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 346
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 33

Conread position: 1-593
Cow position: chr28:11334137-11333545 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 358
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 142, 149

Conread position: 1-631
Cow position: chr28:34695912-34696544 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 57

Conread position: 1-677
Cow position: chr28:7757416-7758095 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 401
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 33

Conread position: 2-712
Cow position: chr28:34695829-34696545 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 107

Conread position: 3-574
Cow position: chr28:7757334-7757905 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 336
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 146, 140

Conread position: 4-482
Cow position: chr28:11333966-11333486 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 293
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 313, 300

Conread position: 4-582
Cow position: chr28:7757755-7758333 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 339
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 286, 303

Conread position: 8-548
Cow position: chr28:34673362-34673902 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 324
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 55

Conread position: 47-664
Cow position: chr28:7810235-7810835 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 364
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 268, 50

Conread position: 53-549
Cow position: chr28:9290141-9290630 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 298
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 7

Conread position: 68-671
Cow position: chr28:11334154-11333548 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 363
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 146, 159

Conread position: 68-712
Cow position: chr28:34695811-34696461 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 74

Conread position: 70-631
Cow position: chr28:9253004-9253567 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 338
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 73

Conread position: 109-507
Cow position: chr28:33210252-33210653 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 189

Conread position: 165-514
Cow position: chr28:9299217-9299566 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 151

Conread position: 166-643
Cow position: chr28:7757413-7757892 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 293
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 103

Conread position: 169-583
Cow position: chr28:33210228-33210643 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 315, 303

Conread position: 170-548
Cow position: chr28:34673356-34673734 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 231
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 49

Conread position: 250-712
Cow position: chr28:7757413-7757881 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 293
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 52

Show alignments to all cow chromosomes.