Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-377 |
| Cow position: | chr6:49341076-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-502 |
| Cow position: | chr6:49362339-49362828 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 1-522 |
| Cow position: | chr6:49340740-49341261 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-553 |
| Cow position: | chr6:49340572-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-554 |
| Cow position: | chr6:49340824-49341377 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-593 |
| Cow position: | chr6:49340656-49341248 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 1-613 |
| Cow position: | chr6:49396377-49396989 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 1-614 |
| Cow position: | chr6:49428312-49428925 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 462, 473 |
| Conread position: | 1-631 |
| Cow position: | chr6:49340488-49341120 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 588, 0 |
| Conread position: | 1-634 |
| Cow position: | chr6:49428648-49429282 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 1-643 |
| Cow position: | chr6:49428816-49429460 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 125 |
| Conread position: | 1-645 |
| Cow position: | chr6:49428732-49429378 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 1-645 |
| Cow position: | chr6:49428900-49429544 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 1-648 |
| Cow position: | chr6:49428564-49429213 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 1-671 |
| Cow position: | chr6:49428396-49429069 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 230 |
| Conread position: | 1-671 |
| Cow position: | chr6:49428480-49429153 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 230 |
| Conread position: | 1-705 |
| Cow position: | chr6:49362099-49362785 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 1-710 |
| Cow position: | chr6:49396293-49397009 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 1-712 |
| Cow position: | chr6:49340404-49341121 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-712 |
| Cow position: | chr6:49395879-49396590 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 2-530 |
| Cow position: | chr6:49362424-49362946 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 207 |
| Conread position: | 3-631 |
| Cow position: | chr6:49428230-49428860 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 466, 471 |
| Conread position: | 5-712 |
| Cow position: | chr6:49396135-49396842 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 24-679 |
| Cow position: | chr6:49395818-49396470 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 25-365 |
| Cow position: | chr6:49362604-49362947 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 272, 17 |
| Conread position: | 64-706 |
| Cow position: | chr6:49396272-49396920 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 167 |
| Conread position: | 69-634 |
| Cow position: | chr6:49340388-49340954 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 507, 562 |
| Conread position: | 82-627 |
| Cow position: | chr6:49428224-49428772 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 226 |
| Conread position: | 82-742 |
| Cow position: | chr6:49395792-49396449 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 159-704 |
| Cow position: | chr6:49362005-49362543 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 166-705 |
| Cow position: | chr6:49428224-49428770 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 66 |
Show alignments to all cow chromosomes.