Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-368 |
| Cow position: | chr8:45201606-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-426 |
| Cow position: | chr8:48406706-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 1-436 |
| Cow position: | chr8:45201522-45201957 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1-460 |
| Cow position: | chr8:55581242-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 1-509 |
| Cow position: | chr8:48407294-48406786 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 1-518 |
| Cow position: | chr8:45201438-45201955 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 1-542 |
| Cow position: | chr8:46816465-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 1-542 |
| Cow position: | chr8:46816801-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 1-584 |
| Cow position: | chr8:48406874-48406291 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 1-590 |
| Cow position: | chr8:45201354-45201943 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 481, 472 |
| Conread position: | 1-592 |
| Cow position: | chr8:55581074-55581665 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 1-593 |
| Cow position: | chr8:45201102-45201694 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 361 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1-603 |
| Cow position: | chr8:46816717-46817319 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 1-625 |
| Cow position: | chr8:46816213-46816838 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 560, 568 |
| Conread position: | 1-627 |
| Cow position: | chr8:48407042-48406414 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 377 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 148, 142 |
| Conread position: | 1-631 |
| Cow position: | chr8:55580906-55581538 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 1-634 |
| Cow position: | chr8:48406958-48406323 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 387 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 1-643 |
| Cow position: | chr8:45201270-45201914 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 481, 472 |
| Conread position: | 1-645 |
| Cow position: | chr8:46816297-46816943 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-677 |
| Cow position: | chr8:45201018-45201697 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 398 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1-677 |
| Cow position: | chr8:45201186-45201865 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 402 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 1-710 |
| Cow position: | chr8:48407630-48406915 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 1-726 |
| Cow position: | chr8:46816549-46817282 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 2-548 |
| Cow position: | chr8:46816046-46816592 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 3-696 |
| Cow position: | chr8:45200936-45201635 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 414 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 7-628 |
| Cow position: | chr8:48407456-48406833 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 579, 0 |
| Conread position: | 63-542 |
| Cow position: | chr8:55580884-55581362 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 472, 0 |
| Conread position: | 160-587 |
| Cow position: | chr8:55580897-55581324 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-593 |
| Cow position: | chr8:46816036-46816469 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 193-679 |
| Cow position: | chr8:55580846-55581335 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 117, 124 |
Show alignments to all cow chromosomes.