Cow genome map
| Conread name: | Ss1.1-rspl24_p14.5 |
| Conread position: | 1-348 |
| Cow position: | chrX:29045008-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 1-515 |
| Cow position: | chrX:25324747-25324233 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 1-533 |
| Cow position: | chrX:14181474-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 327 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 1-544 |
| Cow position: | chrX:25324915-25324372 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 331 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 1-554 |
| Cow position: | chrX:13826780-13826227 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 1-576 |
| Cow position: | chrX:25324831-25324256 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 1-581 |
| Cow position: | chrX:25325335-25324755 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 1-587 |
| Cow position: | chrX:29045260-29044674 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 361 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 1-593 |
| Cow position: | chrX:25325587-25324995 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 1-600 |
| Cow position: | chrX:14181558-14180957 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 353 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 139, 129 |
| Conread position: | 1-612 |
| Cow position: | chrX:25309974-25310586 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 378 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 143, 127 |
| Conread position: | 1-642 |
| Cow position: | chrX:25325083-25324440 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 592, 0 |
| Conread position: | 1-642 |
| Cow position: | chrX:25325671-25325028 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 381 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 1-677 |
| Cow position: | chrX:25325251-25324572 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 408 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 232, 228 |
| Conread position: | 1-717 |
| Cow position: | chrX:25325755-25325034 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 422 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 232, 228 |
| Conread position: | 1-734 |
| Cow position: | chrX:25309806-25310545 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 443 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 2-642 |
| Cow position: | chrX:25325502-25324860 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 382 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 3-592 |
| Cow position: | chrX:13826862-13826273 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 4-543 |
| Cow position: | chrX:14181639-14181100 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 7-449 |
| Cow position: | chrX:14181384-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 14-536 |
| Cow position: | chrX:25309735-25310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 64-637 |
| Cow position: | chrX:29045281-29044706 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 111-628 |
| Cow position: | chrX:29045318-29044799 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 160-542 |
| Cow position: | chrX:25309797-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 244-536 |
| Cow position: | chrX:25309713-25310005 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 813-992 |
| Cow position: | chrX:37190935-37191123 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 56, 169 |
Show alignments to all cow chromosomes.