Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 380-573
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 32

Conread position: 382-573
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 23

Conread position: 399-575
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 30

Conread position: 411-573
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 145

Conread position: 412-573
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 80

Conread position: 419-574
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 136

Conread position: 429-557
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 429-571
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 429-571
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 432-575
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 88

Conread position: 433-575
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 110

Conread position: 433-575
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 433-575
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 433-575
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 19

Conread position: 436-562
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 437-575
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 108

Conread position: 438-562
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 438-573
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 438-575
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 438-575
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 12

Conread position: 439-563
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 39

Conread position: 439-570
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 439-573
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 112

Conread position: 439-573
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 439-573
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 14

Conread position: 439-573
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 117

Conread position: 439-573
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 439-575
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 98

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 439-575
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 84

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 439-575
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 112

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 138

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 11

Conread position: 439-576
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 14

Conread position: 440-573
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 13

Conread position: 441-562
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 441-575
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 442-551
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 442-573
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 85

Conread position: 442-573
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position:
Alignm length: 135
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 74

Conread position: 442-575
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 110

Conread position: 442-575
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 132

Conread position: 442-576
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 74

Conread position: 442-576
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 36

Conread position: 443-573
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 443-573
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 10

Conread position: 445-547
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-573
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 69

Conread position: 445-573
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 445-575
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 106

Conread position: 445-575
Cow position:
Alignm length: 135
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 82

Conread position: 445-575
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 80

Conread position: 445-575
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 445-576
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 127

Conread position: 446-555
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 446-562
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 446-571
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-573
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 57

Conread position: 446-573
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 34

Conread position: 446-574
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 91

Conread position: 446-574
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 107

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 117
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 25

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 135

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 25

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 110

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 99

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 21

Conread position: 447-568
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 32

Conread position: 447-574
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 80

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 46

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 448-575
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 452-574
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 45

Conread position: 452-575
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 110

Conread position: 452-575
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 71

Conread position: 453-575
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 29

Conread position: 456-573
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 60

Conread position: 458-573
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 458-575
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 72

Conread position: 459-573
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 459-575
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 459-575
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 460-572
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 460-573
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 460-575
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 54

Conread position: 460-575
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 470-576
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.