Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 406-573
Cow position: chr10:45658354-45658189 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 26

Conread position: 412-575
Cow position: chr10:15601966-15602139 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 416-575
Cow position: chr10:22341780-22341620 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 6

Conread position: 425-573
Cow position: chr10:51289445-51289294 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 107

Conread position: 425-575
Cow position: chr10:9656327-9656480 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 425-575
Cow position: chr10:37534788-37534632 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 131

Conread position: 430-574
Cow position: chr10:54548694-54548554 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 15

Conread position: 430-575
Cow position: chr10:38800033-38799880 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 38

Conread position: 431-575
Cow position: chr10:19394376-19394531 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 21

Conread position: 432-570
Cow position: chr10:54947953-54948088 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 86

Conread position: 432-575
Cow position: chr10:24862908-24863064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 433-575
Cow position: chr10:50050088-50049947 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 52

Conread position: 434-573
Cow position: chr10:48353752-48353890 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 114

Conread position: 434-575
Cow position: chr10:34705468-34705319 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 437-571
Cow position: chr10:46934592-46934735 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 437-573
Cow position: chr10:38195789-38195932 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 16

Conread position: 437-575
Cow position: chr10:5889572-5889720 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 73

Conread position: 438-574
Cow position: chr10:35820154-35820294 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 15

Conread position: 439-543
Cow position: chr10:60962618-60962510 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 439-560
Cow position: chr10:30923116-30923236 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 14

Conread position: 439-563
Cow position: chr10:3986074-3985945 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 439-569
Cow position: chr10:14093067-14093199 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 14

Conread position: 439-570
Cow position: chr10:55270832-55270972 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 439-572
Cow position: chr10:17984068-17983926 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 439-573
Cow position: chr10:39387632-39387498 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 87

Conread position: 439-573
Cow position: chr10:48377211-48377354 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 439-574
Cow position: chr10:16598875-16598732 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr10:16986519-16986374 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 439-575
Cow position: chr10:22980796-22980936 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 439-575
Cow position: chr10:28721962-28721818 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 120

Conread position: 439-575
Cow position: chr10:36490202-36490062 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 439-575
Cow position: chr10:69934599-69934738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 43

Conread position: 440-560
Cow position: chr10:23284591-23284471 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 86

Conread position: 440-573
Cow position: chr10:23576723-23576590 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 77

Conread position: 440-575
Cow position: chr10:17567922-17568059 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 26

Conread position: 441-569
Cow position: chr10:6436239-6436108 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 441-574
Cow position: chr10:24312710-24312845 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 112

Conread position: 441-575
Cow position: chr10:46151050-46150913 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 441-575
Cow position: chr10:48316762-48316905 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 442-546
Cow position: chr10:24072110-24072216 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 442-560
Cow position: chr10:13979601-13979724 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 442-569
Cow position: chr10:10138041-10137913 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 84

Conread position: 442-573
Cow position: chr10:19372153-19372292 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 442-575
Cow position: chr10:15868436-15868294 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position: chr10:45378820-45378962 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position: chr10:52152978-52152837 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position: chr10:58557346-58557215 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 17

Conread position: 442-575
Cow position: chr10:63484818-63484682 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 443-575
Cow position: chr10:1424013-1423873 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 443-575
Cow position: chr10:15383510-15383369 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 444-575
Cow position: chr10:24421993-24422133 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 445-564
Cow position: chr10:49571379-49571261 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 73

Conread position: 445-570
Cow position: chr10:61509769-61509896 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 92

Conread position: 445-572
Cow position: chr10:14816983-14817119 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position: chr10:32080445-32080316 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 74

Conread position: 445-573
Cow position: chr10:58148991-58149125 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 446-552
Cow position: chr10:58183634-58183742 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 446-568
Cow position: chr10:35717095-35717226 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-571
Cow position: chr10:16645010-16645143 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 43

Conread position: 446-572
Cow position: chr10:25150063-25149934 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 105

Conread position: 446-572
Cow position: chr10:49686919-49686790 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 446-573
Cow position: chr10:35715410-35715545 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 446-573
Cow position: chr10:64285623-64285750 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 72

Conread position: 446-575
Cow position: chr10:9959395-9959258 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 110

Conread position: 446-575
Cow position: chr10:10751810-10751948 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr10:19403090-19402951 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr10:37014813-37014676 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 45

Conread position: 446-575
Cow position: chr10:41132439-41132307 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 105

Conread position: 446-575
Cow position: chr10:56996534-56996666 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 447-572
Cow position: chr10:52125516-52125644 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 447-574
Cow position: chr10:36945623-36945759 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr10:1976143-1976275 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 11

Conread position: 447-575
Cow position: chr10:10153181-10153052 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 109

Conread position: 447-575
Cow position: chr10:11060356-11060485 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 82

Conread position: 447-575
Cow position: chr10:17518669-17518806 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr10:18849699-18849565 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr10:19503104-19503241 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr10:23493513-23493644 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position: chr10:35248964-35249102 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 447-575
Cow position: chr10:42115531-42115402 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 89

Conread position: 447-576
Cow position: chr10:40738166-40738034 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 448-559
Cow position: chr10:40164204-40164317 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 448-575
Cow position: chr10:17073192-17073322 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 449-575
Cow position: chr10:55122983-55122849 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 450-573
Cow position: chr10:5543076-5543206 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 450-575
Cow position: chr10:50533705-50533826 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 44

Conread position: 452-571
Cow position: chr10:27544623-27544499 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position: chr10:25342753-25342629 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position: chr10:31528138-31528014 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position: chr10:16830213-16830344 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr10:17844936-17844809 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr10:33914897-33915023 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position: chr10:34674185-34674060 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 87

Conread position: 452-575
Cow position: chr10:35605215-35605092 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 27

Conread position: 452-575
Cow position: chr10:45294969-45295100 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 21

Conread position: 453-575
Cow position: chr10:44771817-44771692 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 454-575
Cow position: chr10:48619844-48619969 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 458-575
Cow position: chr10:50182889-50183010 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 459-571
Cow position: chr10:4278167-4278279 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 52

Conread position: 459-575
Cow position: chr10:24753300-24753188 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 52

Conread position: 460-575
Cow position: chr10:55319656-55319538 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 461-575
Cow position: chr10:51727264-51727381 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.