Cow genome map
Conread name: | Ss1.1-rspl36_h19.5 |
Conread position: | 405-575 |
Cow position: | chr11:6319906-6320084 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 409-545 |
Cow position: | chr11:68870440-68870581 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 418-576 |
Cow position: | chr11:52690314-52690473 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 85, 18 |
Conread position: | 419-575 |
Cow position: | chr11:19578808-19578967 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 76 |
Conread position: | 429-576 |
Cow position: | chr11:30165714-30165557 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 430-575 |
Cow position: | chr11:37565071-37564922 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 432-563 |
Cow position: | chr11:66685713-66685843 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 70, 7 |
Conread position: | 432-573 |
Cow position: | chr11:80586464-80586325 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 117 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 17, 7 |
Conread position: | 432-575 |
Cow position: | chr11:6581033-6580881 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 432-575 |
Cow position: | chr11:40538748-40538601 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 432-575 |
Cow position: | chr11:68592219-68592066 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 435-575 |
Cow position: | chr11:49149245-49149098 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 436-573 |
Cow position: | chr11:30638756-30638899 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 117 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 436-575 |
Cow position: | chr11:12742298-12742442 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 43 |
Conread position: | 436-575 |
Cow position: | chr11:51683411-51683264 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 437-573 |
Cow position: | chr11:2937478-2937613 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 66, 88 |
Conread position: | 437-574 |
Cow position: | chr11:65495150-65495290 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 437-575 |
Cow position: | chr11:25620197-25620342 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 437-575 |
Cow position: | chr11:62102252-62102399 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 437-575 |
Cow position: | chr11:62811491-62811346 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 10, 139 |
Conread position: | 438-575 |
Cow position: | chr11:55744661-55744516 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 12 |
Conread position: | 438-576 |
Cow position: | chr11:75388184-75388325 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 439-551 |
Cow position: | chr11:77017422-77017308 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-572 |
Cow position: | chr11:2084337-2084195 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-573 |
Cow position: | chr11:49396334-49396475 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-573 |
Cow position: | chr11:82732957-82733099 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 439-574 |
Cow position: | chr11:19147951-19148087 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 64, 11 |
Conread position: | 439-575 |
Cow position: | chr11:1485042-1485178 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 63, 77 |
Conread position: | 439-575 |
Cow position: | chr11:43914484-43914340 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 63, 11 |
Conread position: | 439-575 |
Cow position: | chr11:44176788-44176644 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 14, 54 |
Conread position: | 442-544 |
Cow position: | chr11:7615991-7616095 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 86 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-573 |
Cow position: | chr11:36092730-36092865 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 442-573 |
Cow position: | chr11:49153129-49152999 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 60, 74 |
Conread position: | 442-573 |
Cow position: | chr11:75915174-75915044 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 17 |
Conread position: | 442-576 |
Cow position: | chr11:31525467-31525603 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 444-573 |
Cow position: | chr11:5218978-5219110 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 59, 99 |
Conread position: | 445-555 |
Cow position: | chr11:31508089-31507978 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 57, 84 |
Conread position: | 445-565 |
Cow position: | chr11:36286890-36286771 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 83, 17 |
Conread position: | 445-573 |
Cow position: | chr11:38223608-38223737 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 58, 10 |
Conread position: | 445-573 |
Cow position: | chr11:43641574-43641437 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-573 |
Cow position: | chr11:51729460-51729337 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 119, 58 |
Conread position: | 445-573 |
Cow position: | chr11:81175784-81175648 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-575 |
Cow position: | chr11:15366792-15366924 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 113 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 57, 76 |
Conread position: | 445-576 |
Cow position: | chr11:86925778-86925913 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 57, 21 |
Conread position: | 446-573 |
Cow position: | chr11:28078674-28078544 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-573 |
Cow position: | chr11:41213237-41213100 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-573 |
Cow position: | chr11:63849765-63849901 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 446-574 |
Cow position: | chr11:13397327-13397458 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 56, 93 |
Conread position: | 446-575 |
Cow position: | chr11:3715007-3714869 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 446-575 |
Cow position: | chr11:5176196-5176328 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 446-575 |
Cow position: | chr11:7571805-7571673 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr11:16315059-16314921 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr11:23220545-23220411 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 446-575 |
Cow position: | chr11:25968668-25968806 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-575 |
Cow position: | chr11:27907955-27907825 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 56, 118 |
Conread position: | 446-575 |
Cow position: | chr11:39462804-39462672 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 110 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-575 |
Cow position: | chr11:66041457-66041327 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 111 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 57, 78 |
Conread position: | 446-575 |
Cow position: | chr11:69417588-69417450 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 447-573 |
Cow position: | chr11:41278371-41278236 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 447-575 |
Cow position: | chr11:25791509-25791646 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-575 |
Cow position: | chr11:50629454-50629325 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 21 |
Conread position: | 447-575 |
Cow position: | chr11:65939678-65939814 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 42 |
Conread position: | 447-576 |
Cow position: | chr11:77241886-77241752 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 448-574 |
Cow position: | chr11:80370297-80370162 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 450-569 |
Cow position: | chr11:66104212-66104334 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 450-573 |
Cow position: | chr11:63435703-63435571 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 450-576 |
Cow position: | chr11:63485113-63484985 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 110 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 52, 68 |
Conread position: | 452-557 |
Cow position: | chr11:36180622-36180514 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-572 |
Cow position: | chr11:62742469-62742594 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr11:17369705-17369579 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr11:19247026-19247151 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 51, 34 |
Conread position: | 452-575 |
Cow position: | chr11:26823291-26823158 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr11:33369331-33369199 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr11:37099993-37100124 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr11:48660109-48659983 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 452-575 |
Cow position: | chr11:78380890-78381016 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 452-575 |
Cow position: | chr11:84228544-84228669 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 50, 84 |
Conread position: | 453-575 |
Cow position: | chr11:25751046-25750925 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 111, 50 |
Conread position: | 453-575 |
Cow position: | chr11:57608288-57608411 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 43, 89 |
Conread position: | 459-572 |
Cow position: | chr11:13042976-13043094 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 104 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 459-575 |
Cow position: | chr11:60720282-60720407 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 460-573 |
Cow position: | chr11:64022939-64023054 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 92 |
Conread position: | 461-570 |
Cow position: | chr11:26535954-26535839 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 462-569 |
Cow position: | chr11:57873977-57873863 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 462-575 |
Cow position: | chr11:39854853-39854969 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 463-575 |
Cow position: | chr11:64409134-64409019 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 468-575 |
Cow position: | chr11:18508866-18508982 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.