Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 409-575
Cow position: chr13:3149686-3149512 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 20

Conread position: 414-575
Cow position: chr13:53847366-53847202 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 40

Conread position: 424-575
Cow position: chr13:32282886-32283047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 43

Conread position: 425-575
Cow position: chr13:1339379-1339222 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 77, 27

Conread position: 426-575
Cow position: chr13:34533164-34533013 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 28

Conread position: 428-575
Cow position: chr13:37069107-37069264 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 14

Conread position: 430-575
Cow position: chr13:9702226-9702379 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 20

Conread position: 430-575
Cow position: chr13:30148786-30148644 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 45

Conread position: 431-575
Cow position: chr13:19182900-19182751 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 432-573
Cow position: chr13:15868880-15869031 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 432-575
Cow position: chr13:21127570-21127418 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 45

Conread position: 433-575
Cow position: chr13:20854692-20854537 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 122

Conread position: 434-569
Cow position: chr13:5092622-5092481 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 435-573
Cow position: chr13:7046656-7046787 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 17

Conread position: 436-569
Cow position: chr13:17159106-17158965 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 17

Conread position: 436-572
Cow position: chr13:43577763-43577907 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 17

Conread position: 436-573
Cow position: chr13:56432046-56431908 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 67, 90

Conread position: 437-573
Cow position: chr13:10986732-10986584 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 438-569
Cow position: chr13:17813249-17813384 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 15

Conread position: 438-570
Cow position: chr13:53138217-53138348 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 82

Conread position: 439-558
Cow position: chr13:21170306-21170427 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 0

Conread position: 439-573
Cow position: chr13:3003264-3003392 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 64

Conread position: 439-573
Cow position: chr13:7097362-7097503 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 439-573
Cow position: chr13:9108893-9108758 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 14

Conread position: 439-573
Cow position: chr13:13320574-13320714 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 439-573
Cow position: chr13:14782126-14782259 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 46

Conread position: 439-573
Cow position: chr13:21275634-21275776 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 56

Conread position: 439-573
Cow position: chr13:21981192-21981057 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 125

Conread position: 439-573
Cow position: chr13:34261013-34261148 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 86

Conread position: 439-573
Cow position: chr13:52055816-52055675 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 439-575
Cow position: chr13:6113754-6113607 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr13:9551142-9551280 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 11

Conread position: 439-575
Cow position: chr13:10220735-10220880 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr13:13797039-13796892 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr13:22729627-22729483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 11

Conread position: 439-575
Cow position: chr13:25926567-25926709 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 6

Conread position: 439-575
Cow position: chr13:43576789-43576933 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 16

Conread position: 440-574
Cow position: chr13:29805233-29805099 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 13

Conread position: 440-575
Cow position: chr13:24715028-24715160 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 81

Conread position: 441-575
Cow position: chr13:37775426-37775288 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 104

Conread position: 442-560
Cow position: chr13:49795819-49795945 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 442-573
Cow position: chr13:2338974-2339098 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 442-573
Cow position: chr13:6973943-6974078 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 114

Conread position: 442-573
Cow position: chr13:8637475-8637615 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position: chr13:62007888-62008024 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 442-575
Cow position: chr13:6996935-6997072 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 442-575
Cow position: chr13:17823170-17823031 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 442-575
Cow position: chr13:45593705-45593840 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 11

Conread position: 442-576
Cow position: chr13:4037704-4037836 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 11

Conread position: 442-576
Cow position: chr13:8367499-8367638 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 443-575
Cow position: chr13:40491000-40491134 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 10

Conread position: 444-575
Cow position: chr13:22046227-22046092 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-563
Cow position: chr13:41979353-41979234 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 81

Conread position: 445-570
Cow position: chr13:14063737-14063607 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 445-572
Cow position: chr13:13533878-13533749 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 114

Conread position: 445-573
Cow position: chr13:37555087-37554956 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 0

Conread position: 445-575
Cow position: chr13:14411675-14411815 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 0

Conread position: 445-575
Cow position: chr13:17975178-17975044 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 29

Conread position: 445-575
Cow position: chr13:42200404-42200538 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 445-575
Cow position: chr13:45499015-45499148 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 445-575
Cow position: chr13:56035073-56034940 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 446-556
Cow position: chr13:53634201-53634313 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-572
Cow position: chr13:390852-390724 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 28

Conread position: 446-573
Cow position: chr13:14576000-14576130 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 446-573
Cow position: chr13:15162851-15162715 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 446-574
Cow position: chr13:21012750-21012888 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:585089-584951 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:5263494-5263362 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr13:5659980-5659848 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position: chr13:5911106-5910977 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 36

Conread position: 446-575
Cow position: chr13:10925138-10925002 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 124

Conread position: 446-575
Cow position: chr13:20880040-20879905 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:27146605-27146743 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:28536536-28536398 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:29665802-29665940 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:45352812-45352950 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr13:54128813-54128677 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 109

Conread position: 447-565
Cow position: chr13:27230512-27230394 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 63

Conread position: 447-573
Cow position: chr13:21288299-21288168 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position: chr13:55765390-55765263 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 105

Conread position: 447-575
Cow position: chr13:2529166-2529031 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position: chr13:11146839-11146976 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position: chr13:20042478-20042341 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position: chr13:24107760-24107629 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr13:55007984-55007853 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 448-573
Cow position: chr13:15289132-15289004 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 448-575
Cow position: chr13:37946599-37946470 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 84

Conread position: 450-573
Cow position: chr13:11260066-11260192 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 452-569
Cow position: chr13:11410499-11410622 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 452-572
Cow position: chr13:4965191-4965311 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 84

Conread position: 452-573
Cow position: chr13:8699952-8699820 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 452-574
Cow position: chr13:20174528-20174659 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 0

Conread position: 452-574
Cow position: chr13:49356258-49356131 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr13:9124719-9124844 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 111
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 119

Conread position: 452-575
Cow position: chr13:10989283-10989151 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr13:48126895-48127027 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position: chr13:50646838-50646712 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 453-575
Cow position: chr13:15041683-15041554 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 458-573
Cow position: chr13:10522736-10522854 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 459-575
Cow position: chr13:11439226-11439108 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 23

Conread position: 459-575
Cow position: chr13:52027338-52027218 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 460-570
Cow position: chr13:56958776-56958895 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 460-575
Cow position: chr13:8667414-8667538 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 0

Conread position: 461-575
Cow position: chr13:242431-242554 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.