Cow genome map


           Conread name:
           Ss1.1-rspl36_h19.5
        

               Conread position:
               400-573
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               418-575
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               428-575
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               429-574
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               432-573
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               433-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               434-575
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               435-563
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               436-573
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               437-573
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 95
               

               Conread position:
               438-575
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               439-570
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-571
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               439-572
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               440-571
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               440-576
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               441-573
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               441-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               441-573
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               441-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               441-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               442-570
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 81
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               444-563
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               444-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-576
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               446-570
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               446-572
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               446-574
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 55
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               447-561
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-569
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-574
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               453-574
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               453-575
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               454-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               457-573
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               460-572
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               462-570
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 70
               
Show alignments to all cow chromosomes.