Cow genome map


           Conread name:
           Ss1.1-rspl36_h19.5
        

               Conread position:
               407-573
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 124
               

               Conread position:
               409-575
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               413-575
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               418-574
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               423-575
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               425-575
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               427-572
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               430-576
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               433-575
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               434-575
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               436-562
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               437-572
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               437-573
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 82
               

               Conread position:
               438-570
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               438-573
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               438-573
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               439-563
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               439-570
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               439-572
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               439-574
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 6
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               441-573
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               441-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-570
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               442-576
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               443-573
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               444-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-570
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-570
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-576
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 85
               

               Conread position:
               446-560
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-568
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               446-572
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               446-574
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               446-574
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               447-560
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-573
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               447-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               447-573
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               450-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               452-569
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               50, 73
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               452-576
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 118
               

               Conread position:
               453-571
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               454-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               458-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               458-576
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               459-570
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               459-570
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               459-573
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               459-575
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               460-575
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               460-575
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               460-575
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               461-574
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               
Show alignments to all cow chromosomes.