Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 407-573
Cow position: chr16:18206196-18206028 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 124

Conread position: 409-575
Cow position: chr16:30054860-30055035 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 135

Conread position: 413-575
Cow position: chr16:44138256-44138426 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 41

Conread position: 418-574
Cow position: chr16:14210555-14210713 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 15

Conread position: 423-575
Cow position: chr16:23089064-23088911 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 27

Conread position: 425-575
Cow position: chr16:8809874-8810027 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 427-572
Cow position: chr16:4102622-4102761 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 26

Conread position: 430-576
Cow position: chr16:13995978-13996130 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 41

Conread position: 433-573
Cow position: chr16:49860451-49860306 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 123

Conread position: 433-575
Cow position: chr16:9097241-9097090 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 434-575
Cow position: chr16:56595173-56595323 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 436-562
Cow position: chr16:15957267-15957400 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 437-572
Cow position: chr16:35297615-35297473 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 133

Conread position: 437-573
Cow position: chr16:9836570-9836705 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 82

Conread position: 438-570
Cow position: chr16:29655524-29655397 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 65

Conread position: 438-573
Cow position: chr16:4062576-4062712 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 88

Conread position: 438-573
Cow position: chr16:51216835-51216977 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 439-563
Cow position: chr16:50933685-50933807 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 43

Conread position: 439-570
Cow position: chr16:41115784-41115919 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 116

Conread position: 439-572
Cow position: chr16:33073674-33073816 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 100

Conread position: 439-573
Cow position: chr16:820458-820319 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 13

Conread position: 439-573
Cow position: chr16:9513501-9513363 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 439-574
Cow position: chr16:38663499-38663643 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr16:7496457-7496323 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 6

Conread position: 439-575
Cow position: chr16:18572846-18572987 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr16:29311738-29311590 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 441-573
Cow position: chr16:15714319-15714178 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 441-575
Cow position: chr16:23681568-23681429 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 442-570
Cow position: chr16:17746239-17746109 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 442-573
Cow position: chr16:30646714-30646581 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 11

Conread position: 442-575
Cow position: chr16:19756573-19756710 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 442-576
Cow position: chr16:50569465-50569329 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 11

Conread position: 443-573
Cow position: chr16:38355227-38355360 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 444-575
Cow position: chr16:45193604-45193742 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 445-570
Cow position: chr16:11083199-11083069 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 445-570
Cow position: chr16:14242571-14242440 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 445-573
Cow position: chr16:39165436-39165308 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 69

Conread position: 445-575
Cow position: chr16:1548678-1548811 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-575
Cow position: chr16:28444284-28444423 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 445-575
Cow position: chr16:36286484-36286617 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 72

Conread position: 445-575
Cow position: chr16:49336423-49336290 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 445-576
Cow position: chr16:47852395-47852527 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 85

Conread position: 446-560
Cow position: chr16:39646812-39646696 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 446-568
Cow position: chr16:258081-258212 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 446-572
Cow position: chr16:30368623-30368756 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 110

Conread position: 446-573
Cow position: chr16:11359349-11359220 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 86

Conread position: 446-574
Cow position: chr16:9596571-9596438 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 11

Conread position: 446-574
Cow position: chr16:15370885-15370754 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr16:8065683-8065821 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr16:11775795-11775927 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr16:19282209-19282072 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position: chr16:20743114-20743247 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 36

Conread position: 446-575
Cow position: chr16:25419049-25419187 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr16:28233103-28233238 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 33

Conread position: 446-575
Cow position: chr16:31559106-31558968 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr16:42253204-42253334 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 18

Conread position: 446-575
Cow position: chr16:52325394-52325532 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 447-560
Cow position: chr16:27004074-27003950 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position: chr16:6609308-6609435 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 96

Conread position: 447-573
Cow position: chr16:22984951-22984822 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 447-573
Cow position: chr16:29712617-29712488 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 447-573
Cow position: chr16:46552993-46552863 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 12

Conread position: 447-575
Cow position: chr16:4911250-4911379 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 67

Conread position: 447-575
Cow position: chr16:7928181-7928318 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position: chr16:12220887-12220748 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr16:12457883-12458018 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 24

Conread position: 447-575
Cow position: chr16:21442408-21442544 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 19

Conread position: 447-575
Cow position: chr16:44144592-44144455 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 450-573
Cow position: chr16:51143997-51143868 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 452-569
Cow position: chr16:19670162-19670280 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 73

Conread position: 452-573
Cow position: chr16:9959025-9958898 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position: chr16:30211645-30211523 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 74

Conread position: 452-575
Cow position: chr16:3048956-3049087 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 452-575
Cow position: chr16:4277356-4277487 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 452-575
Cow position: chr16:7665836-7665704 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr16:9600612-9600486 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position: chr16:40029689-40029817 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 57

Conread position: 452-575
Cow position: chr16:51393191-51393324 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 104

Conread position: 452-576
Cow position: chr16:8288755-8288882 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 118

Conread position: 453-571
Cow position: chr16:48145210-48145332 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 454-575
Cow position: chr16:29038111-29037982 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 96

Conread position: 458-575
Cow position: chr16:17617170-17617296 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 458-576
Cow position: chr16:33290577-33290450 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 459-570
Cow position: chr16:14754139-14754251 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 59

Conread position: 459-570
Cow position: chr16:51043835-51043724 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 70

Conread position: 459-573
Cow position: chr16:11957389-11957509 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 459-575
Cow position: chr16:28199217-28199095 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 460-575
Cow position: chr16:4910334-4910458 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 460-575
Cow position: chr16:7270347-7270471 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 460-575
Cow position: chr16:7812881-7812757 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 461-574
Cow position: chr16:14568304-14568421 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.