Cow genome map
Conread name: | Ss1.1-rspl36_h19.5 |
Conread position: | 412-575 |
Cow position: | chr18:14871404-14871572 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 89, 30 |
Conread position: | 414-574 |
Cow position: | chr18:21528848-21528684 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 14 |
Conread position: | 414-575 |
Cow position: | chr18:21751579-21751411 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 415-575 |
Cow position: | chr18:36098556-36098399 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 84, 44 |
Conread position: | 417-575 |
Cow position: | chr18:45573576-45573413 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 85, 25 |
Conread position: | 419-571 |
Cow position: | chr18:10213993-10214153 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 419-575 |
Cow position: | chr18:19765379-19765222 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 84, 33 |
Conread position: | 422-573 |
Cow position: | chr18:4851289-4851448 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 19, 62 |
Conread position: | 426-570 |
Cow position: | chr18:45897915-45897769 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 124 |
Conread position: | 429-573 |
Cow position: | chr18:19809496-19809647 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 430-575 |
Cow position: | chr18:38211347-38211189 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 431-575 |
Cow position: | chr18:5632448-5632301 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 432-575 |
Cow position: | chr18:39811401-39811550 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 433-573 |
Cow position: | chr18:2144750-2144606 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 69, 9 |
Conread position: | 433-573 |
Cow position: | chr18:18844193-18844051 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 433-573 |
Cow position: | chr18:29264184-29264320 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 68, 92 |
Conread position: | 437-570 |
Cow position: | chr18:9974153-9974290 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 65, 116 |
Conread position: | 437-573 |
Cow position: | chr18:9010884-9010743 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 439-573 |
Cow position: | chr18:39460391-39460255 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 64, 34 |
Conread position: | 439-573 |
Cow position: | chr18:42967280-42967147 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 13, 44 |
Conread position: | 439-575 |
Cow position: | chr18:16313551-16313412 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 439-575 |
Cow position: | chr18:20998236-20998382 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 70, 14 |
Conread position: | 442-564 |
Cow position: | chr18:38669651-38669783 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 442-570 |
Cow position: | chr18:51757266-51757131 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-573 |
Cow position: | chr18:35857752-35857889 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-575 |
Cow position: | chr18:728191-728059 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 10 |
Conread position: | 442-575 |
Cow position: | chr18:8208251-8208392 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 443-570 |
Cow position: | chr18:29474908-29474781 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 122, 10 |
Conread position: | 443-573 |
Cow position: | chr18:46048925-46048787 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 443-575 |
Cow position: | chr18:42290163-42290294 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 121, 63 |
Conread position: | 443-575 |
Cow position: | chr18:42292891-42293022 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 121, 63 |
Conread position: | 445-553 |
Cow position: | chr18:18956713-18956825 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-561 |
Cow position: | chr18:4264227-4264345 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 445-569 |
Cow position: | chr18:11867507-11867379 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-570 |
Cow position: | chr18:641146-641275 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 57, 107 |
Conread position: | 445-572 |
Cow position: | chr18:135491-135620 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 59, 78 |
Conread position: | 445-572 |
Cow position: | chr18:47417169-47417033 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-572 |
Cow position: | chr18:51405748-51405875 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 58, 34 |
Conread position: | 445-573 |
Cow position: | chr18:12059163-12059032 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-573 |
Cow position: | chr18:18816100-18815962 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 48, 106 |
Conread position: | 445-573 |
Cow position: | chr18:55499239-55499106 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-575 |
Cow position: | chr18:1144023-1144151 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 30 |
Conread position: | 445-575 |
Cow position: | chr18:23821660-23821799 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 25, 32 |
Conread position: | 445-575 |
Cow position: | chr18:29080962-29080840 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 119, 35 |
Conread position: | 446-559 |
Cow position: | chr18:44909220-44909103 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 446-563 |
Cow position: | chr18:32960247-32960123 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-573 |
Cow position: | chr18:1571071-1571202 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 446-573 |
Cow position: | chr18:1931291-1931423 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 446-573 |
Cow position: | chr18:5072249-5072375 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 83 |
Conread position: | 446-573 |
Cow position: | chr18:24719477-24719348 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 17, 81 |
Conread position: | 446-574 |
Cow position: | chr18:3180578-3180445 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 109 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:7487403-7487265 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-575 |
Cow position: | chr18:11657827-11657689 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:12584676-12584806 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 446-575 |
Cow position: | chr18:16659260-16659399 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:33364378-33364245 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:34490449-34490314 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:52251686-52251824 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr18:55692986-55692849 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 446-575 |
Cow position: | chr18:56463560-56463698 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-576 |
Cow position: | chr18:18918795-18918928 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 447-560 |
Cow position: | chr18:30295442-30295557 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 447-567 |
Cow position: | chr18:56181291-56181415 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 447-571 |
Cow position: | chr18:52387051-52387183 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-572 |
Cow position: | chr18:41703001-41702870 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 55, 111 |
Conread position: | 447-573 |
Cow position: | chr18:43283589-43283721 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 447-575 |
Cow position: | chr18:17195179-17195312 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-575 |
Cow position: | chr18:37690318-37690183 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 112 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 448-575 |
Cow position: | chr18:3212046-3211911 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 450-570 |
Cow position: | chr18:10757893-10758017 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 450-575 |
Cow position: | chr18:12273818-12273691 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 107 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 53, 43 |
Conread position: | 452-560 |
Cow position: | chr18:5647970-5647862 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 92 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 74 |
Conread position: | 452-575 |
Cow position: | chr18:5189529-5189660 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 452-575 |
Cow position: | chr18:31556995-31557127 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr18:35235859-35235990 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 453-562 |
Cow position: | chr18:15279804-15279693 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 453-573 |
Cow position: | chr18:4495729-4495851 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 105 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 50, 37 |
Conread position: | 453-575 |
Cow position: | chr18:14172052-14172178 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 453-575 |
Cow position: | chr18:25757153-25757283 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 454-573 |
Cow position: | chr18:51643209-51643330 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 48, 99 |
Conread position: | 458-573 |
Cow position: | chr18:22045255-22045379 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 458-575 |
Cow position: | chr18:51655026-51655146 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 39, 80 |
Conread position: | 459-573 |
Cow position: | chr18:43014715-43014832 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 99 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 43, 93 |
Conread position: | 459-575 |
Cow position: | chr18:24022770-24022651 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 459-575 |
Cow position: | chr18:40047349-40047467 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 102 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 44, 91 |
Conread position: | 460-575 |
Cow position: | chr18:42427770-42427653 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 43, 38 |
Conread position: | 462-574 |
Cow position: | chr18:35874230-35874112 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 465-575 |
Cow position: | chr18:24759510-24759623 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 96 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.