Cow genome map


           Conread name:
           Ss1.1-rspl36_h19.5
        

               Conread position:
               416-575
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               421-575
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               422-575
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               430-575
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               432-575
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               432-575
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               433-575
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               433-575
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               434-562
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               434-574
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               437-575
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               438-570
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 6
               

               Conread position:
               439-574
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 121
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 116
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               444-570
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               445-563
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-567
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               446-574
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               56, 83
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 107
               

               Conread position:
               447-562
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               447-568
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-572
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-574
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-576
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               448-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               450-574
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               450-575
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               450-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-576
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               452-576
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               453-564
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               453-570
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               454-572
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               454-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               458-573
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               458-575
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               459-573
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               459-575
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               459-575
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               460-573
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               460-575
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               461-570
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               462-575
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.