Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 408-573
Cow position: chr2:28710768-28710935 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 69

Conread position: 416-573
Cow position: chr2:47195197-47195031 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 29

Conread position: 423-575
Cow position: chr2:32988793-32988634 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 19

Conread position: 429-573
Cow position: chr2:46162174-46162026 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 430-573
Cow position: chr2:64465562-64465707 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 7

Conread position: 432-575
Cow position: chr2:19530986-19530834 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 433-572
Cow position: chr2:15720845-15720705 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 20

Conread position: 433-573
Cow position: chr2:70449236-70449092 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 433-575
Cow position: chr2:21950186-21950042 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 20

Conread position: 434-573
Cow position: chr2:19137677-19137821 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 434-574
Cow position: chr2:28452734-28452877 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 436-575
Cow position: chr2:26694822-26694674 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 437-574
Cow position: chr2:55004495-55004355 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 93

Conread position: 437-575
Cow position: chr2:69109134-69109282 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 438-573
Cow position: chr2:33603594-33603455 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 438-573
Cow position: chr2:46317083-46316939 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 438-573
Cow position: chr2:81481055-81480915 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 438-575
Cow position: chr2:42970317-42970176 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 439-545
Cow position: chr2:47177319-47177215 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 439-562
Cow position: chr2:42975489-42975615 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 439-573
Cow position: chr2:7194417-7194277 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 53

Conread position: 439-573
Cow position: chr2:43624331-43624464 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 84

Conread position: 439-573
Cow position: chr2:47165621-47165763 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 99

Conread position: 439-573
Cow position: chr2:58336015-58336154 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 14

Conread position: 439-573
Cow position: chr2:82304156-82304020 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 20

Conread position: 439-575
Cow position: chr2:26361967-26361822 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 439-575
Cow position: chr2:42183574-42183439 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 67

Conread position: 439-575
Cow position: chr2:53567691-53567555 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 6

Conread position: 439-575
Cow position: chr2:67595809-67595953 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 6

Conread position: 441-573
Cow position: chr2:19494421-19494283 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 441-573
Cow position: chr2:21380197-21380333 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 112

Conread position: 441-573
Cow position: chr2:76110596-76110465 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 9

Conread position: 442-564
Cow position: chr2:22496108-22496229 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 43

Conread position: 442-569
Cow position: chr2:46120439-46120569 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 442-573
Cow position: chr2:9543517-9543379 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 442-573
Cow position: chr2:13722089-13721961 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 26

Conread position: 442-573
Cow position: chr2:69579470-69579610 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 442-575
Cow position: chr2:7909021-7908884 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 43

Conread position: 442-575
Cow position: chr2:10505405-10505547 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 53

Conread position: 442-575
Cow position: chr2:26438523-26438658 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 57

Conread position: 442-575
Cow position: chr2:65603433-65603568 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 108

Conread position: 442-575
Cow position: chr2:78379216-78379352 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 11

Conread position: 443-573
Cow position: chr2:24271419-24271287 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 108

Conread position: 444-572
Cow position: chr2:6311454-6311327 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 71

Conread position: 445-568
Cow position: chr2:18997919-18997793 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 445-571
Cow position: chr2:24669572-24669438 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-573
Cow position: chr2:43990973-43990841 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position: chr2:45478399-45478528 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 80

Conread position: 445-573
Cow position: chr2:46053676-46053539 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-573
Cow position: chr2:70908130-70908259 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 81

Conread position: 445-573
Cow position: chr2:80275090-80275225 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 445-574
Cow position: chr2:56350709-56350849 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 446-544
Cow position: chr2:33471795-33471895 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 446-568
Cow position: chr2:8576201-8576076 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-571
Cow position: chr2:485777-485647 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 446-571
Cow position: chr2:39371612-39371486 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 33

Conread position: 446-573
Cow position: chr2:1036185-1036320 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 446-573
Cow position: chr2:30127088-30127221 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 446-573
Cow position: chr2:71486977-71486847 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 446-575
Cow position: chr2:2098109-2098246 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 43

Conread position: 446-575
Cow position: chr2:3739640-3739778 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 446-575
Cow position: chr2:15348598-15348460 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr2:16847386-16847248 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr2:18243736-18243605 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 29

Conread position: 446-575
Cow position: chr2:19211859-19211988 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 52

Conread position: 446-575
Cow position: chr2:40597774-40597636 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr2:41158158-41158029 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 34

Conread position: 446-575
Cow position: chr2:44313514-44313652 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr2:45565903-45565773 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 83

Conread position: 446-575
Cow position: chr2:54700659-54700523 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position: chr2:56021517-56021378 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 446-575
Cow position: chr2:59396849-59396987 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr2:81913201-81913065 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-569
Cow position: chr2:45899732-45899606 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 447-570
Cow position: chr2:80177397-80177519 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 68

Conread position: 447-575
Cow position: chr2:15400747-15400881 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 447-575
Cow position: chr2:19058353-19058223 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 104

Conread position: 447-575
Cow position: chr2:68328651-68328786 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 448-575
Cow position: chr2:6039215-6039080 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 112

Conread position: 452-571
Cow position: chr2:36124629-36124501 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position: chr2:15872125-15872004 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 24

Conread position: 452-573
Cow position: chr2:21049139-21049261 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 73

Conread position: 452-573
Cow position: chr2:73981825-73981701 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-574
Cow position: chr2:15058866-15058996 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 91

Conread position: 452-574
Cow position: chr2:44215696-44215569 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 452-574
Cow position: chr2:67302214-67302084 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr2:13369853-13369721 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 452-575
Cow position: chr2:13468412-13468282 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 104

Conread position: 452-575
Cow position: chr2:67810844-67810975 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 453-572
Cow position: chr2:79687344-79687466 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 453-573
Cow position: chr2:17940090-17940219 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 453-575
Cow position: chr2:3728218-3728093 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 454-575
Cow position: chr2:12873601-12873478 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 83

Conread position: 454-575
Cow position: chr2:49716892-49717021 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 111

Conread position: 459-573
Cow position: chr2:29394817-29394940 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 460-573
Cow position: chr2:38795584-38795699 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 65

Conread position: 460-575
Cow position: chr2:78360598-78360476 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 461-575
Cow position: chr2:67386284-67386407 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.