Cow genome map
Conread name: | Ss1.1-rspl36_h19.5 |
Conread position: | 406-568 |
Cow position: | chr21:19136596-19136764 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 411-573 |
Cow position: | chr21:43656003-43655834 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 26, 10 |
Conread position: | 424-575 |
Cow position: | chr21:745457-745305 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 78, 113 |
Conread position: | 425-571 |
Cow position: | chr21:44251551-44251709 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 17, 58 |
Conread position: | 429-573 |
Cow position: | chr21:36508512-36508366 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 50 |
Conread position: | 431-573 |
Cow position: | chr21:6051785-6051635 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 6, 23 |
Conread position: | 433-565 |
Cow position: | chr21:31278465-31278326 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 68, 17 |
Conread position: | 434-569 |
Cow position: | chr21:29011699-29011836 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 68, 110 |
Conread position: | 434-575 |
Cow position: | chr21:5345160-5345008 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 434-575 |
Cow position: | chr21:42501330-42501180 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 437-572 |
Cow position: | chr21:30976993-30977130 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 16, 95 |
Conread position: | 437-575 |
Cow position: | chr21:6292026-6291876 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 438-573 |
Cow position: | chr21:23587145-23587014 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 125, 65 |
Conread position: | 438-574 |
Cow position: | chr21:15869958-15869821 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 66, 12 |
Conread position: | 438-575 |
Cow position: | chr21:29658547-29658405 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 438-575 |
Cow position: | chr21:30938393-30938536 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-570 |
Cow position: | chr21:42227425-42227564 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-572 |
Cow position: | chr21:16152713-16152574 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 439-572 |
Cow position: | chr21:20185519-20185381 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 64, 115 |
Conread position: | 439-573 |
Cow position: | chr21:10727782-10727641 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 439-573 |
Cow position: | chr21:30970208-30970067 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 15, 52 |
Conread position: | 439-575 |
Cow position: | chr21:4109049-4108905 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 439-575 |
Cow position: | chr21:6998213-6998077 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 63, 72 |
Conread position: | 440-573 |
Cow position: | chr21:32339474-32339608 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 440-575 |
Cow position: | chr21:28244738-28244600 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 116 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 441-575 |
Cow position: | chr21:10004613-10004756 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 441-575 |
Cow position: | chr21:40571201-40571336 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 113 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 61, 78 |
Conread position: | 442-551 |
Cow position: | chr21:28955888-28955775 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-573 |
Cow position: | chr21:6713255-6713391 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-575 |
Cow position: | chr21:5218977-5218839 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-575 |
Cow position: | chr21:8430828-8430970 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-575 |
Cow position: | chr21:24757206-24757070 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 442-575 |
Cow position: | chr21:25345133-25344991 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-575 |
Cow position: | chr21:27677752-27677610 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-576 |
Cow position: | chr21:36763331-36763190 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 442-576 |
Cow position: | chr21:38449183-38449320 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 444-570 |
Cow position: | chr21:438823-438697 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 82 |
Conread position: | 445-546 |
Cow position: | chr21:40432730-40432627 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-569 |
Cow position: | chr21:12154391-12154264 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-572 |
Cow position: | chr21:14464852-14464716 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-573 |
Cow position: | chr21:29418839-29418700 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 445-574 |
Cow position: | chr21:37014159-37014297 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 445-575 |
Cow position: | chr21:3379487-3379622 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 446-560 |
Cow position: | chr21:4281619-4281734 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 58, 9 |
Conread position: | 446-569 |
Cow position: | chr21:17072863-17072738 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 83 |
Conread position: | 446-571 |
Cow position: | chr21:38482647-38482513 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-572 |
Cow position: | chr21:44724111-44724240 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-573 |
Cow position: | chr21:8545754-8545891 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 446-573 |
Cow position: | chr21:18495480-18495353 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 58, 80 |
Conread position: | 446-574 |
Cow position: | chr21:30359085-30359216 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 111 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr21:3135603-3135739 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 57, 36 |
Conread position: | 446-575 |
Cow position: | chr21:12322763-12322627 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 446-575 |
Cow position: | chr21:12473797-12473931 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-575 |
Cow position: | chr21:21940146-21940277 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 54, 86 |
Conread position: | 446-575 |
Cow position: | chr21:26828706-26828844 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr21:27521077-27521210 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 446-575 |
Cow position: | chr21:37706147-37706285 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 446-575 |
Cow position: | chr21:41738173-41738038 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 447-570 |
Cow position: | chr21:42145083-42144958 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 75, 104 |
Conread position: | 447-572 |
Cow position: | chr21:28919267-28919395 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-574 |
Cow position: | chr21:29014653-29014780 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 55, 85 |
Conread position: | 447-575 |
Cow position: | chr21:24222253-24222383 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 55, 93 |
Conread position: | 447-575 |
Cow position: | chr21:31658890-31659021 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 447-575 |
Cow position: | chr21:40475765-40475628 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 447-575 |
Cow position: | chr21:42189496-42189626 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 82 |
Conread position: | 447-575 |
Cow position: | chr21:45970915-45971044 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 55, 73 |
Conread position: | 448-575 |
Cow position: | chr21:10264298-10264163 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 114 |
Conread position: | 448-575 |
Cow position: | chr21:27863256-27863383 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 54, 72 |
Conread position: | 448-575 |
Cow position: | chr21:38943345-38943478 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 450-575 |
Cow position: | chr21:20160939-20160806 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 110 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 53, 31 |
Conread position: | 450-575 |
Cow position: | chr21:32536652-32536526 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 107 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 54, 74 |
Conread position: | 452-569 |
Cow position: | chr21:11353323-11353196 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 106 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 452-572 |
Cow position: | chr21:15444823-15444952 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-573 |
Cow position: | chr21:22718524-22718652 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 452-573 |
Cow position: | chr21:48482271-48482398 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-574 |
Cow position: | chr21:17983230-17983108 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 112, 16 |
Conread position: | 452-574 |
Cow position: | chr21:44829497-44829628 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 452-575 |
Cow position: | chr21:17184177-17184047 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 452-575 |
Cow position: | chr21:17890562-17890432 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 452-575 |
Cow position: | chr21:23568484-23568358 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 453-575 |
Cow position: | chr21:28882441-28882311 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 453-576 |
Cow position: | chr21:10410482-10410351 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 455-575 |
Cow position: | chr21:17193492-17193619 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 458-573 |
Cow position: | chr21:40916734-40916615 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 101 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 44, 95 |
Conread position: | 460-573 |
Cow position: | chr21:31258720-31258598 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 460-573 |
Cow position: | chr21:41287545-41287661 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 461-573 |
Cow position: | chr21:40846760-40846640 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 462-573 |
Cow position: | chr21:3360767-3360883 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 465-573 |
Cow position: | chr21:7424767-7424882 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.