Cow genome map
Conread name: | Ss1.1-rspl36_h19.5 |
Conread position: | 206-486 |
Cow position: | chr24:19743120-19742852 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 196 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 359-575 |
Cow position: | chr24:11036573-11036793 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 100 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 414-575 |
Cow position: | chr24:2992670-2992839 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 30, 7 |
Conread position: | 425-575 |
Cow position: | chr24:14550988-14550836 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 427-571 |
Cow position: | chr24:13586795-13586945 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 116 |
Conread position: | 430-575 |
Cow position: | chr24:18702592-18702440 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 72, 23 |
Conread position: | 432-575 |
Cow position: | chr24:250344-250496 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 433-575 |
Cow position: | chr24:18405089-18405239 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 437-573 |
Cow position: | chr24:19187117-19186981 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 66, 16 |
Conread position: | 437-574 |
Cow position: | chr24:44040829-44040962 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 65, 19 |
Conread position: | 437-575 |
Cow position: | chr24:3404801-3404660 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 437-575 |
Cow position: | chr24:39903816-39903963 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 437-576 |
Cow position: | chr24:5152711-5152564 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 122 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 438-575 |
Cow position: | chr24:12121083-12120938 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 64, 15 |
Conread position: | 438-575 |
Cow position: | chr24:22194601-22194461 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 20, 114 |
Conread position: | 439-570 |
Cow position: | chr24:25970902-25971029 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 126, 13 |
Conread position: | 439-573 |
Cow position: | chr24:32890864-32891000 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 65, 32 |
Conread position: | 439-575 |
Cow position: | chr24:40592899-40592759 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 14, 95 |
Conread position: | 440-573 |
Cow position: | chr24:31160860-31160994 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 441-575 |
Cow position: | chr24:30483762-30483899 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 114 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 442-571 |
Cow position: | chr24:26588400-26588266 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 442-572 |
Cow position: | chr24:6739993-6740128 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 442-575 |
Cow position: | chr24:27906619-27906481 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 74, 58 |
Conread position: | 443-573 |
Cow position: | chr24:27719351-27719483 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 61, 15 |
Conread position: | 445-572 |
Cow position: | chr24:34301859-34301994 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 58, 23 |
Conread position: | 445-575 |
Cow position: | chr24:390278-390145 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 445-575 |
Cow position: | chr24:28788036-28787895 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-567 |
Cow position: | chr24:11035335-11035460 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 446-571 |
Cow position: | chr24:17308964-17309092 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-571 |
Cow position: | chr24:28722054-28721930 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 108 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 56, 70 |
Conread position: | 446-573 |
Cow position: | chr24:27149559-27149427 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 36 |
Conread position: | 446-573 |
Cow position: | chr24:27810326-27810201 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 57, 36 |
Conread position: | 446-573 |
Cow position: | chr24:31383285-31383159 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 56, 36 |
Conread position: | 446-573 |
Cow position: | chr24:36286745-36286613 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 446-575 |
Cow position: | chr24:11028510-11028647 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 56, 103 |
Conread position: | 446-575 |
Cow position: | chr24:16303507-16303635 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 57, 33 |
Conread position: | 446-575 |
Cow position: | chr24:18811009-18810873 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 13 |
Conread position: | 446-575 |
Cow position: | chr24:22420139-22420002 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 25 |
Conread position: | 446-575 |
Cow position: | chr24:35335260-35335133 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 116, 52 |
Conread position: | 446-575 |
Cow position: | chr24:36554524-36554656 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr24:37252334-37252199 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 446-575 |
Cow position: | chr24:39910854-39910991 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 56, 119 |
Conread position: | 447-551 |
Cow position: | chr24:10031750-10031640 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 92 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 447-570 |
Cow position: | chr24:16510147-16510024 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 56, 24 |
Conread position: | 447-573 |
Cow position: | chr24:21834787-21834915 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 55, 97 |
Conread position: | 447-574 |
Cow position: | chr24:23046719-23046855 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 447-574 |
Cow position: | chr24:28700219-28700093 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 27 |
Conread position: | 447-575 |
Cow position: | chr24:2359009-2359140 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-575 |
Cow position: | chr24:16641089-16640952 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 447-575 |
Cow position: | chr24:18750886-18750749 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-575 |
Cow position: | chr24:19801015-19800884 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 447-575 |
Cow position: | chr24:21606500-21606637 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 447-575 |
Cow position: | chr24:25947683-25947820 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 452-575 |
Cow position: | chr24:4634994-4635126 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 452-575 |
Cow position: | chr24:16995049-16994923 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 452-575 |
Cow position: | chr24:18874649-18874779 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 104 |
Conread position: | 452-575 |
Cow position: | chr24:38693706-38693837 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 51, 37 |
Conread position: | 453-569 |
Cow position: | chr24:39523280-39523401 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 454-575 |
Cow position: | chr24:10126048-10125926 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 19 |
Conread position: | 454-575 |
Cow position: | chr24:24532340-24532215 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 457-575 |
Cow position: | chr24:23556171-23556292 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 459-575 |
Cow position: | chr24:44987208-44987333 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 460-571 |
Cow position: | chr24:19637749-19637635 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.