Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 206-486
Cow position: chr24:19743120-19742852 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 30

Conread position: 359-575
Cow position: chr24:11036573-11036793 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 414-575
Cow position: chr24:2992670-2992839 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 7

Conread position: 425-575
Cow position: chr24:14550988-14550836 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 427-571
Cow position: chr24:13586795-13586945 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 116

Conread position: 430-575
Cow position: chr24:18702592-18702440 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 23

Conread position: 432-575
Cow position: chr24:250344-250496 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 433-575
Cow position: chr24:18405089-18405239 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 437-573
Cow position: chr24:19187117-19186981 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 16

Conread position: 437-574
Cow position: chr24:44040829-44040962 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 19

Conread position: 437-575
Cow position: chr24:3404801-3404660 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 437-575
Cow position: chr24:39903816-39903963 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 437-576
Cow position: chr24:5152711-5152564 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 8

Conread position: 438-575
Cow position: chr24:12121083-12120938 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 15

Conread position: 438-575
Cow position: chr24:22194601-22194461 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 114

Conread position: 439-570
Cow position: chr24:25970902-25971029 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 13

Conread position: 439-573
Cow position: chr24:32890864-32891000 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 32

Conread position: 439-575
Cow position: chr24:40592899-40592759 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 95

Conread position: 440-573
Cow position: chr24:31160860-31160994 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 19

Conread position: 441-575
Cow position: chr24:30483762-30483899 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 442-571
Cow position: chr24:26588400-26588266 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 442-572
Cow position: chr24:6739993-6740128 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 442-575
Cow position: chr24:27906619-27906481 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 58

Conread position: 443-573
Cow position: chr24:27719351-27719483 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 15

Conread position: 445-572
Cow position: chr24:34301859-34301994 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 23

Conread position: 445-575
Cow position: chr24:390278-390145 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 445-575
Cow position: chr24:28788036-28787895 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 446-567
Cow position: chr24:11035335-11035460 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 446-571
Cow position: chr24:17308964-17309092 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 446-571
Cow position: chr24:28722054-28721930 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 70

Conread position: 446-573
Cow position: chr24:27149559-27149427 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 36

Conread position: 446-573
Cow position: chr24:27810326-27810201 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 36

Conread position: 446-573
Cow position: chr24:31383285-31383159 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 36

Conread position: 446-573
Cow position: chr24:36286745-36286613 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr24:11028510-11028647 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 103

Conread position: 446-575
Cow position: chr24:16303507-16303635 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 33

Conread position: 446-575
Cow position: chr24:18811009-18810873 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 13

Conread position: 446-575
Cow position: chr24:22420139-22420002 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 25

Conread position: 446-575
Cow position: chr24:35335260-35335133 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 52

Conread position: 446-575
Cow position: chr24:36554524-36554656 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr24:37252334-37252199 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr24:39910854-39910991 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 119

Conread position: 447-551
Cow position: chr24:10031750-10031640 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 447-570
Cow position: chr24:16510147-16510024 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 24

Conread position: 447-573
Cow position: chr24:21834787-21834915 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 97

Conread position: 447-574
Cow position: chr24:23046719-23046855 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 447-574
Cow position: chr24:28700219-28700093 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 27

Conread position: 447-575
Cow position: chr24:2359009-2359140 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr24:16641089-16640952 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 447-575
Cow position: chr24:18750886-18750749 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr24:19801015-19800884 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 447-575
Cow position: chr24:21606500-21606637 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr24:25947683-25947820 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 452-575
Cow position: chr24:4634994-4635126 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 452-575
Cow position: chr24:16995049-16994923 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr24:18874649-18874779 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 104

Conread position: 452-575
Cow position: chr24:38693706-38693837 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 37

Conread position: 453-569
Cow position: chr24:39523280-39523401 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 454-575
Cow position: chr24:10126048-10125926 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 19

Conread position: 454-575
Cow position: chr24:24532340-24532215 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 457-575
Cow position: chr24:23556171-23556292 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 459-575
Cow position: chr24:44987208-44987333 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 460-571
Cow position: chr24:19637749-19637635 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.