Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 387-576
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 18

Conread position: 400-567
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 11

Conread position: 406-574
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 45

Conread position: 411-576
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 421-569
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 427-572
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 428-572
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 25

Conread position: 429-573
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 46

Conread position: 429-573
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 74

Conread position: 429-575
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 430-573
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 23

Conread position: 431-570
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 8

Conread position: 431-575
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 432-575
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 7

Conread position: 432-575
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 47

Conread position: 433-570
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 46

Conread position: 433-575
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 433-575
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 437-575
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 5

Conread position: 437-575
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 438-573
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 438-573
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 438-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 126, 65

Conread position: 439-569
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 439-573
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 75

Conread position: 439-573
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 59

Conread position: 439-573
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 14

Conread position: 439-575
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 40

Conread position: 439-575
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 121

Conread position: 439-575
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 11

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 439-575
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 439-576
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 36

Conread position: 440-574
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 28

Conread position: 441-573
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 76

Conread position: 442-564
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 110

Conread position: 442-568
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 16

Conread position: 442-569
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 85

Conread position: 442-573
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 73

Conread position: 442-573
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 37

Conread position: 442-573
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 48

Conread position: 442-573
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 11

Conread position: 442-573
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 443-575
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 445-567
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 445-573
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 82

Conread position: 445-573
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 445-575
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 445-575
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 86

Conread position: 445-575
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 13

Conread position: 445-575
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 445-576
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 98

Conread position: 446-573
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 446-573
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 446-573
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 108

Conread position: 446-573
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 58

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 102

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 93

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 34

Conread position: 446-575
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 31

Conread position: 446-575
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 446-575
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 121

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 447-559
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 21

Conread position: 447-573
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 84

Conread position: 447-573
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 79

Conread position: 447-573
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 447-573
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 79

Conread position: 447-574
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 109

Conread position: 447-575
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 62

Conread position: 447-575
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 447-575
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 91

Conread position: 449-575
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 450-563
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 450-573
Cow position:
Alignm length: 127
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 68

Conread position: 451-573
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 78

Conread position: 451-573
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 75

Conread position: 452-570
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 27

Conread position: 452-573
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 84

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 84

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 111
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 453-575
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 453-575
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 454-575
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 458-573
Cow position:
Alignm length: 125
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 458-575
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 24

Conread position: 458-575
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 461-576
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 66

Show alignments to all cow chromosomes.