Cow genome map


           Conread name:
           Ss1.1-rspl36_h19.5
        

               Conread position:
               411-575
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               414-570
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               419-573
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               423-575
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               425-562
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 70
               

               Conread position:
               429-573
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               430-562
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               430-576
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               432-571
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               433-553
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               433-573
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               436-573
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               436-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               436-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               436-576
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               437-571
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               439-555
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-562
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               439-573
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               439-574
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               439-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               126, 64
               

               Conread position:
               440-575
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               441-573
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               442-571
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-572
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               442-572
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-574
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               442-574
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               442-575
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               443-573
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               445-571
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-572
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 53
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               445-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               446-571
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-571
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-571
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               446-573
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 101
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               446-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               447-569
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 109
               

               Conread position:
               447-573
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               447-575
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               448-575
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               450-573
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               450-573
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               452-571
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-573
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               452-575
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               453-572
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               454-575
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               457-575
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               458-571
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               459-573
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               460-575
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               462-575
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               468-575
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               468-575
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               480-575
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.