Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 379-573
Cow position: chr7:4765150-4764955 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 46

Conread position: 406-575
Cow position: chr7:25722393-25722558 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 96, 18

Conread position: 407-569
Cow position: chr7:30931701-30931863 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 117

Conread position: 407-573
Cow position: chr7:30012109-30011942 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 38

Conread position: 418-575
Cow position: chr7:249236-249397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 21

Conread position: 429-574
Cow position: chr7:18388130-18388290 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 430-575
Cow position: chr7:43077664-43077510 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 430-575
Cow position: chr7:55315945-55316094 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 433-573
Cow position: chr7:7461860-7462009 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 434-575
Cow position: chr7:19652183-19652325 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 91

Conread position: 435-569
Cow position: chr7:32373288-32373151 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 435-575
Cow position: chr7:32807701-32807556 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 436-568
Cow position: chr7:43102938-43103078 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 48

Conread position: 436-573
Cow position: chr7:50442643-50442786 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 65, 9

Conread position: 436-574
Cow position: chr7:9858604-9858464 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 17

Conread position: 437-573
Cow position: chr7:58800422-58800278 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 437-575
Cow position: chr7:30290687-30290837 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 5

Conread position: 437-575
Cow position: chr7:39093671-39093818 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 438-575
Cow position: chr7:14497533-14497389 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 12

Conread position: 439-564
Cow position: chr7:14029556-14029429 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 439-571
Cow position: chr7:12329977-12330114 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 14

Conread position: 439-572
Cow position: chr7:5724425-5724292 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 92

Conread position: 439-573
Cow position: chr7:30154759-30154896 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 439-573
Cow position: chr7:48020675-48020538 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr7:17000979-17000834 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position: chr7:19466008-19466142 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 77

Conread position: 439-575
Cow position: chr7:23678178-23678034 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 98

Conread position: 439-575
Cow position: chr7:55498839-55498981 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 46

Conread position: 439-576
Cow position: chr7:59942035-59941897 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 440-575
Cow position: chr7:39528544-39528681 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 18

Conread position: 441-575
Cow position: chr7:62953759-62953623 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 57

Conread position: 442-571
Cow position: chr7:58967517-58967379 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 442-572
Cow position: chr7:9093531-9093669 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position: chr7:40305009-40305143 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position: chr7:40414755-40414887 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 76

Conread position: 442-573
Cow position: chr7:53271255-53271121 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 442-575
Cow position: chr7:535473-535608 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 102

Conread position: 442-575
Cow position: chr7:44942804-44942665 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 443-575
Cow position: chr7:27290250-27290391 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 444-573
Cow position: chr7:1761976-1761841 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 444-573
Cow position: chr7:48721660-48721795 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 111

Conread position: 444-574
Cow position: chr7:65818194-65818325 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 93

Conread position: 445-572
Cow position: chr7:25859958-25860095 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 58

Conread position: 445-572
Cow position: chr7:53000277-53000146 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 108

Conread position: 445-573
Cow position: chr7:23255996-23255864 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position: chr7:38429473-38429601 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 92

Conread position: 445-573
Cow position: chr7:40308273-40308409 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position: chr7:40310815-40310952 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 445-575
Cow position: chr7:7907728-7907861 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 445-575
Cow position: chr7:57506542-57506673 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 446-546
Cow position: chr7:25802515-25802415 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 49

Conread position: 446-553
Cow position: chr7:29474900-29474785 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 446-571
Cow position: chr7:43450786-43450653 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 25

Conread position: 446-573
Cow position: chr7:8089405-8089275 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr7:3304822-3304685 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr7:10385124-10384987 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 97

Conread position: 446-575
Cow position: chr7:10559740-10559874 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr7:16022535-16022403 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 446-575
Cow position: chr7:29682205-29682343 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr7:31049356-31049484 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 76

Conread position: 446-575
Cow position: chr7:32549165-32549303 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 446-575
Cow position: chr7:37698051-37697913 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr7:38084558-38084426 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr7:40710499-40710366 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 99

Conread position: 446-575
Cow position: chr7:41122027-41122159 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr7:43085120-43084982 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 446-575
Cow position: chr7:43109294-43109432 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position: chr7:46823916-46823778 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position: chr7:47547648-47547517 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 104

Conread position: 446-575
Cow position: chr7:49068595-49068733 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 446-576
Cow position: chr7:35286403-35286533 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 57

Conread position: 447-562
Cow position: chr7:40344636-40344752 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 82

Conread position: 447-562
Cow position: chr7:47047106-47047223 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 447-573
Cow position: chr7:32093495-32093360 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-574
Cow position: chr7:1376368-1376243 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 30

Conread position: 447-574
Cow position: chr7:40412832-40412701 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr7:11511961-11511832 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 447-575
Cow position: chr7:18016912-18016782 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 103

Conread position: 447-575
Cow position: chr7:31885837-31885701 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 96

Conread position: 447-575
Cow position: chr7:38360993-38361130 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position: chr7:47523454-47523324 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 62

Conread position: 447-575
Cow position: chr7:53791352-53791483 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 448-575
Cow position: chr7:28441416-28441286 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 448-575
Cow position: chr7:63300440-63300304 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 448-576
Cow position: chr7:12342752-12342889 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 450-573
Cow position: chr7:29505351-29505225 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 450-575
Cow position: chr7:39021968-39022102 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 452-575
Cow position: chr7:8523544-8523672 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr7:16285338-16285469 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position: chr7:23552728-23552856 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position: chr7:25263607-25263476 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 452-575
Cow position: chr7:34216440-34216317 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 25

Conread position: 453-574
Cow position: chr7:7535771-7535649 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 89

Conread position: 453-575
Cow position: chr7:43411774-43411651 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 454-575
Cow position: chr7:42943540-42943417 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 96

Conread position: 458-570
Cow position: chr7:68144740-68144630 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 69

Conread position: 459-573
Cow position: chr7:21573800-21573681 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 459-573
Cow position: chr7:30017292-30017408 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 67

Conread position: 459-575
Cow position: chr7:11946110-11945991 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 107
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 461-576
Cow position: chr7:35779967-35779849 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 463-575
Cow position: chr7:11884057-11884173 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.