Cow genome map

Conread name: Ss1.1-rspl36_h19.5

Conread position: 407-573
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 419-573
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 34

Conread position: 422-571
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 7

Conread position: 422-575
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 10

Conread position: 427-575
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 429-573
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 16

Conread position: 429-575
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 432-575
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 432-575
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 433-575
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 433-575
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 434-573
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 437-575
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 437-575
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 438-570
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 438-575
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 438-575
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 439-564
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 94

Conread position: 439-567
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 439-571
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 439-572
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 439-573
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 14

Conread position: 439-573
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 90

Conread position: 439-573
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 0

Conread position: 439-575
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 439-575
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 14

Conread position: 439-575
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 11

Conread position: 440-575
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 41

Conread position: 440-575
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 441-573
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 75

Conread position: 441-573
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 441-575
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 0

Conread position: 441-575
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 124

Conread position: 442-541
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 11

Conread position: 442-555
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 442-574
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 442-574
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 442-575
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 79

Conread position: 442-575
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 442-575
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 442-575
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 43

Conread position: 442-575
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 0

Conread position: 442-575
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 443-575
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 10

Conread position: 444-573
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 71

Conread position: 445-560
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 445-573
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 445-573
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 13

Conread position: 445-574
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 44

Conread position: 445-575
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 445-575
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 14

Conread position: 446-570
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 446-571
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 13

Conread position: 446-571
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 446-572
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 446-573
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 0

Conread position: 446-573
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 31

Conread position: 446-573
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 446-573
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 84

Conread position: 446-573
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 117, 57

Conread position: 446-573
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 80

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 446-575
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 18

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 110

Conread position: 446-575
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 81

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 39

Conread position: 446-575
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 446-575
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 446-575
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 446-575
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 446-575
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 100

Conread position: 446-575
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 447-570
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 447-572
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 447-573
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 16

Conread position: 447-575
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 447-575
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 84

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 447-575
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 447-575
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 80

Conread position: 447-575
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 448-575
Cow position:
Alignm length: 132
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 450-573
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 77

Conread position: 452-570
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-573
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 452-575
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 452-575
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 452-575
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 453-573
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 453-574
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 453-575
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 454-575
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 96

Conread position: 455-575
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 16

Conread position: 457-575
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 459-573
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 90

Conread position: 459-575
Cow position:
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 20

Conread position: 460-575
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 460-575
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 57

Conread position: 460-575
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 462-571
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 24

Conread position: 468-573
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.