Cow genome map
| Conread name: | Ss1.1-rssp25_n10.5 | 
| Conread position: | 1-173 | 
| Cow position: | chr3:8298788-8298616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 172-305 | 
| Cow position: | chr3:8298005-8297873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 300-443 | 
| Cow position: | chr3:8286656-8286515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 432-553 | 
| Cow position: | chr3:8284929-8284808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 550-622 | 
| Cow position: | chr3:8284723-8284651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 73 | 
| Alignm identity: | 70 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 623-698 | 
| Cow position: | chr3:8283348-8283273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 76 | 
| Alignm identity: | 74 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 760-831 | 
| Cow position: | chr3:8282409-8282338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 72 | 
| Alignm identity: | 68 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 830-919 | 
| Cow position: | chr3:8281376-8281287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 90 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 911-1112 | 
| Cow position: | chr3:8280570-8280365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 54 | 
Show alignments to all cow chromosomes.
