Cow genome map


           Conread name:
           Ss1.1-rste14_k12.5
        

               Conread position:
               2-236
               

               Cow position:
               chr1:41698859-41698617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               29-244
               

               Cow position:
               chr1:102830786-102830568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               84-257
               

               Cow position:
               chr1:43512996-43513173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               87-244
               

               Cow position:
               chr1:85856180-85856021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               92-238
               

               Cow position:
               chr1:62402344-62402488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               96-239
               

               Cow position:
               chr1:61792936-61792794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               100-244
               

               Cow position:
               chr1:39154027-39153882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               100-260
               

               Cow position:
               chr1:39003946-39004108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 99
               

               Conread position:
               102-244
               

               Cow position:
               chr1:67466574-67466431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               104-234
               

               Cow position:
               chr1:22887046-22886913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               113-238
               

               Cow position:
               chr1:64913554-64913428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.