Cow genome map


           Conread name:
           Ss1.1-rste14_k12.5
        

               Conread position:
               29-238
               

               Cow position:
               chr4:35398141-35398361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               85-242
               

               Cow position:
               chr4:7642221-7642062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               87-238
               

               Cow position:
               chr4:38837771-38837926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               100-244
               

               Cow position:
               chr4:33470928-33470785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               100-261
               

               Cow position:
               chr4:30276140-30275972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               102-238
               

               Cow position:
               chr4:18683015-18682878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 119
               

               Conread position:
               103-237
               

               Cow position:
               chr4:61265022-61264888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               103-261
               

               Cow position:
               chr4:38619265-38619421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               104-244
               

               Cow position:
               chr4:40230488-40230625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               125-244
               

               Cow position:
               chr4:42038166-42038045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               9, 21
               
Show alignments to all cow chromosomes.