Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 234-850 |
| Cow position: | chr10:8996607-8995985 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 238-658 |
| Cow position: | chr10:9031237-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 339-891 |
| Cow position: | chr10:8996922-8996364 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 214 |
| Conread position: | 395-887 |
| Cow position: | chr10:8996695-8996200 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 395-891 |
| Cow position: | chr10:9010339-9009840 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 231 |
| Conread position: | 404-884 |
| Cow position: | chr10:8996602-8996119 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 404-1012 |
| Cow position: | chr10:8996518-8995893 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 567 |
| Conread position: | 408-742 |
| Cow position: | chr10:9031327-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 412-866 |
| Cow position: | chr10:8996761-8996305 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 434-891 |
| Cow position: | chr10:9010468-9010008 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 52, 356 |
| Conread position: | 463-877 |
| Cow position: | chr10:9010355-9009938 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 481-867 |
| Cow position: | chr10:9010502-9010116 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 489-866 |
| Cow position: | chr10:9010578-9010201 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 144 |
| Conread position: | 490-1096 |
| Cow position: | chr10:9031243-9031856 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 491-859 |
| Cow position: | chr10:21938996-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 493-729 |
| Cow position: | chr10:9010072-9009834 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 493-892 |
| Cow position: | chr10:21939078-21938681 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 517-702 |
| Cow position: | chr10:9031672-9031858 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 517-886 |
| Cow position: | chr10:21939222-21938853 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 518-867 |
| Cow position: | chr10:21939137-21938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-1180 |
| Cow position: | chr10:9031230-9031856 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 210 |
| Conread position: | 561-884 |
| Cow position: | chr10:9010590-9010267 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 146, 155 |
| Conread position: | 601-828 |
| Cow position: | chr10:9031672-9031898 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 220 |
| Conread position: | 873-1196 |
| Cow position: | chr10:8996444-8996119 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 889-1146 |
| Cow position: | chr10:8996258-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1178 |
| Cow position: | chr10:8996594-8996305 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 215, 223 |
| Conread position: | 889-1192 |
| Cow position: | chr10:8996762-8996459 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr10:8996342-8996035 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr10:8996510-8996203 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1200 |
| Cow position: | chr10:8996678-8996367 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 890-1197 |
| Cow position: | chr10:8996845-8996538 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 890-1207 |
| Cow position: | chr10:9031248-9031565 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 891-1193 |
| Cow position: | chr10:9010152-9009850 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 936-1196 |
| Cow position: | chr10:8996883-8996623 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 46 |
Show alignments to all cow chromosomes.