Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 240-879 |
| Cow position: | chr14:25859515-25860160 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 241-868 |
| Cow position: | chr14:25783928-25784561 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 197 |
| Conread position: | 242-871 |
| Cow position: | chr14:25794933-25794297 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 303-868 |
| Cow position: | chr14:25836608-25837180 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 382-866 |
| Cow position: | chr14:25784159-25784643 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 382-887 |
| Cow position: | chr14:3101280-3100777 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 383-1183 |
| Cow position: | chr14:25783569-25784396 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 388-1180 |
| Cow position: | chr14:25783742-25784561 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 326 |
| Conread position: | 393-767 |
| Cow position: | chr14:25794527-25794150 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 393-862 |
| Cow position: | chr14:25783411-25783882 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 395-826 |
| Cow position: | chr14:3156051-3156485 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 395-866 |
| Cow position: | chr14:25783497-25783971 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 395-866 |
| Cow position: | chr14:25794945-25794471 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 68 |
| Conread position: | 395-868 |
| Cow position: | chr14:3127869-3127393 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 67, 408 |
| Conread position: | 395-885 |
| Cow position: | chr14:25836620-25837113 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 321 |
| Conread position: | 395-887 |
| Cow position: | chr14:3080609-3080114 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 408 |
| Conread position: | 395-887 |
| Cow position: | chr14:3127953-3127458 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 313 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 395-891 |
| Cow position: | chr14:447574-448073 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 68, 321 |
| Conread position: | 396-1201 |
| Cow position: | chr14:3155395-3156212 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 319 |
| Conread position: | 397-868 |
| Cow position: | chr14:25860263-25860737 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 397-868 |
| Cow position: | chr14:25877314-25877788 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 400-871 |
| Cow position: | chr14:25860182-25860656 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 400-871 |
| Cow position: | chr14:25877233-25877707 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 401-879 |
| Cow position: | chr14:25859427-25859908 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 401-880 |
| Cow position: | chr14:25836542-25837024 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 406-872 |
| Cow position: | chr14:25877155-25877624 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 408-891 |
| Cow position: | chr14:3155980-3156466 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 298 |
| Conread position: | 435-741 |
| Cow position: | chr14:3100646-3100333 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 436-822 |
| Cow position: | chr14:447865-448256 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 292 |
| Conread position: | 436-868 |
| Cow position: | chr14:680835-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 436-868 |
| Cow position: | chr14:25895474-25895911 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 436-878 |
| Cow position: | chr14:3080738-3080291 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 436-887 |
| Cow position: | chr14:3080822-3080366 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 436-888 |
| Cow position: | chr14:680499-680956 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 205 |
| Conread position: | 437-866 |
| Cow position: | chr14:25877100-25877534 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 338 |
| Conread position: | 437-868 |
| Cow position: | chr14:3101058-3100628 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 189 |
| Conread position: | 438-887 |
| Cow position: | chr14:3080232-3079778 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 444-878 |
| Cow position: | chr14:3127736-3127299 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 444-888 |
| Cow position: | chr14:3100803-3100356 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 448-868 |
| Cow position: | chr14:25910712-25911124 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 184, 21 |
| Conread position: | 455-866 |
| Cow position: | chr14:25783303-25783719 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 459-871 |
| Cow position: | chr14:25794963-25794550 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 462-858 |
| Cow position: | chr14:25795466-25795067 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 463-868 |
| Cow position: | chr14:3101366-3100962 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 465-1074 |
| Cow position: | chr14:25794788-25794156 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 471-868 |
| Cow position: | chr14:3155962-3156359 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 472-871 |
| Cow position: | chr14:25876297-25876699 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 474-866 |
| Cow position: | chr14:25795031-25794639 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 153 |
| Conread position: | 479-672 |
| Cow position: | chr14:3156548-3156742 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 479-884 |
| Cow position: | chr14:25859843-25860249 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 485-866 |
| Cow position: | chr14:25795188-25794807 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 485-868 |
| Cow position: | chr14:25836461-25836844 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 485-869 |
| Cow position: | chr14:25784346-25784730 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 485-872 |
| Cow position: | chr14:25860186-25860573 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 488-868 |
| Cow position: | chr14:3080849-3080469 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 214, 228 |
| Conread position: | 490-752 |
| Cow position: | chr14:25910998-25911260 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-728 |
| Cow position: | chr14:25836971-25837208 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-868 |
| Cow position: | chr14:25835795-25836172 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 110, 80 |
| Conread position: | 491-870 |
| Cow position: | chr14:25910915-25911294 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 126 |
| Conread position: | 491-872 |
| Cow position: | chr14:25836383-25836764 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-872 |
| Cow position: | chr14:25859940-25860321 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 491-879 |
| Cow position: | chr14:25860024-25860412 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 491-879 |
| Cow position: | chr14:25876571-25876959 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 491-879 |
| Cow position: | chr14:25877075-25877463 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-884 |
| Cow position: | chr14:25859268-25859661 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 491-884 |
| Cow position: | chr14:25859352-25859745 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 363, 357 |
| Conread position: | 491-884 |
| Cow position: | chr14:25876739-25877132 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 492-866 |
| Cow position: | chr14:25860109-25860483 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 224, 220 |
| Conread position: | 493-830 |
| Cow position: | chr14:25860444-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 493-867 |
| Cow position: | chr14:25836049-25836423 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 271, 289 |
| Conread position: | 493-868 |
| Cow position: | chr14:25876657-25877032 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 141, 145 |
| Conread position: | 493-868 |
| Cow position: | chr14:25877495-25877872 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 493-869 |
| Cow position: | chr14:25910833-25911209 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 230, 220 |
| Conread position: | 493-872 |
| Cow position: | chr14:25836217-25836596 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 270, 277 |
| Conread position: | 493-878 |
| Cow position: | chr14:25895872-25896257 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 199, 223 |
| Conread position: | 493-879 |
| Cow position: | chr14:3080088-3079702 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 161, 155 |
| Conread position: | 493-879 |
| Cow position: | chr14:25895956-25896342 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 493-884 |
| Cow position: | chr14:25836301-25836692 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 493-885 |
| Cow position: | chr14:25876993-25877385 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 493-891 |
| Cow position: | chr14:3080424-3080026 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 494-871 |
| Cow position: | chr14:25876490-25876867 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 494-879 |
| Cow position: | chr14:25836134-25836519 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 232, 219 |
| Conread position: | 495-867 |
| Cow position: | chr14:25795094-25794722 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 495-872 |
| Cow position: | chr14:25896040-25896417 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 501-885 |
| Cow position: | chr14:25795340-25794956 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 507-871 |
| Cow position: | chr14:25783444-25783808 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 507-878 |
| Cow position: | chr14:3080998-3080627 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 110, 100 |
| Conread position: | 508-872 |
| Cow position: | chr14:25859201-25859565 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 216, 205 |
| Conread position: | 508-887 |
| Cow position: | chr14:3128173-3127794 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 513-872 |
| Cow position: | chr14:3128000-3127641 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 262, 285 |
| Conread position: | 514-875 |
| Cow position: | chr14:3061718-3061357 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-879 |
| Cow position: | chr14:680834-681199 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 275, 284 |
| Conread position: | 514-891 |
| Cow position: | chr14:680666-681043 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 517-878 |
| Cow position: | chr14:25895644-25896005 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 523-879 |
| Cow position: | chr14:25835911-25836267 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 118, 106 |
| Conread position: | 529-840 |
| Cow position: | chr14:3100883-3100572 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 535-871 |
| Cow position: | chr14:25783304-25783640 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 556-879 |
| Cow position: | chr14:447570-447893 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 560-748 |
| Cow position: | chr14:3156546-3156734 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-866 |
| Cow position: | chr14:25795448-25795143 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 151, 140 |
| Conread position: | 562-821 |
| Cow position: | chr14:420630-420889 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 142, 160 |
| Conread position: | 564-889 |
| Cow position: | chr14:25859173-25859498 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 200, 204 |
| Conread position: | 566-879 |
| Cow position: | chr14:25910742-25911051 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 568-871 |
| Cow position: | chr14:25895863-25896166 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 72 |
| Conread position: | 574-879 |
| Cow position: | chr14:3080847-3080542 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 577-868 |
| Cow position: | chr14:25836049-25836340 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 136 |
| Conread position: | 578-884 |
| Cow position: | chr14:25876490-25876796 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 627-866 |
| Cow position: | chr14:25795466-25795227 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 170, 161 |
| Conread position: | 711-867 |
| Cow position: | chr14:25795466-25795310 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 711-1183 |
| Cow position: | chr14:25783312-25783808 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 340 |
| Conread position: | 876-1204 |
| Cow position: | chr14:25795275-25794950 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 885-1200 |
| Cow position: | chr14:3101338-3101024 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 888-1178 |
| Cow position: | chr14:25794761-25794471 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 888-1178 |
| Cow position: | chr14:25795181-25794891 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1178 |
| Cow position: | chr14:25795349-25795059 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 888-1179 |
| Cow position: | chr14:25795013-25794722 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 140, 114 |
| Conread position: | 888-1181 |
| Cow position: | chr14:25784353-25784646 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 223, 211 |
| Conread position: | 888-1183 |
| Cow position: | chr14:25794845-25794550 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1184 |
| Cow position: | chr14:25836468-25836764 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 133 |
| Conread position: | 888-1196 |
| Cow position: | chr14:25784017-25784325 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 223, 208 |
| Conread position: | 888-1196 |
| Cow position: | chr14:25794677-25794369 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 889-1180 |
| Cow position: | chr14:3100835-3100544 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 889-1180 |
| Cow position: | chr14:3155984-3156275 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 889-1180 |
| Cow position: | chr14:3156068-3156359 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1180 |
| Cow position: | chr14:25836553-25836844 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 889-1190 |
| Cow position: | chr14:25794508-25794206 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 889-1191 |
| Cow position: | chr14:25876657-25876959 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 141, 145 |
| Conread position: | 889-1191 |
| Cow position: | chr14:25876909-25877211 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 889-1196 |
| Cow position: | chr14:25836385-25836692 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 889-1196 |
| Cow position: | chr14:25859354-25859661 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1200 |
| Cow position: | chr14:680897-681208 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 943-1178 |
| Cow position: | chr14:25795462-25795227 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 161, 154 |
Show alignments to all cow chromosomes.