Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 220-868
Cow position:
Alignm length: 660
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 6

Conread position: 222-846
Cow position:
Alignm length: 633
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 12

Conread position: 229-849
Cow position:
Alignm length: 630
Alignm identity: 385
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 67, 9

Conread position: 229-868
Cow position:
Alignm length: 652
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 233-868
Cow position:
Alignm length: 647
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 131

Conread position: 233-868
Cow position:
Alignm length: 645
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 70

Conread position: 233-889
Cow position:
Alignm length: 670
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 234-866
Cow position:
Alignm length: 641
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 130

Conread position: 261-1180
Cow position:
Alignm length: 942
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 143

Conread position: 286-879
Cow position:
Alignm length: 605
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 152

Conread position: 309-866
Cow position:
Alignm length: 570
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 68

Conread position: 380-830
Cow position:
Alignm length: 456
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 383-752
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 58

Conread position: 383-1179
Cow position:
Alignm length: 815
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 50

Conread position: 387-884
Cow position:
Alignm length: 502
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 8

Conread position: 392-866
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 393-866
Cow position:
Alignm length: 478
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 393-887
Cow position:
Alignm length: 498
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 8

Conread position: 394-863
Cow position:
Alignm length: 477
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 7

Conread position: 395-868
Cow position:
Alignm length: 477
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 395-886
Cow position:
Alignm length: 498
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 146

Conread position: 395-888
Cow position:
Alignm length: 498
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 87

Conread position: 395-889
Cow position:
Alignm length: 499
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 378

Conread position: 395-891
Cow position:
Alignm length: 502
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 395-891
Cow position:
Alignm length: 502
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 147

Conread position: 395-1155
Cow position:
Alignm length: 791
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 395-1181
Cow position:
Alignm length: 816
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 395-1190
Cow position:
Alignm length: 816
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 396-781
Cow position:
Alignm length: 391
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 35

Conread position: 396-860
Cow position:
Alignm length: 470
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 86

Conread position: 397-866
Cow position:
Alignm length: 474
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 376

Conread position: 397-868
Cow position:
Alignm length: 478
Alignm identity: 300
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 38

Conread position: 397-869
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 397-935
Cow position:
Alignm length: 545
Alignm identity: 346
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 38

Conread position: 400-868
Cow position:
Alignm length: 473
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 404-866
Cow position:
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 408-888
Cow position:
Alignm length: 485
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 365

Conread position: 409-831
Cow position:
Alignm length: 428
Alignm identity: 272
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 64

Conread position: 409-875
Cow position:
Alignm length: 470
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 437-675
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 45

Conread position: 437-875
Cow position:
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 438-896
Cow position:
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 337

Conread position: 444-868
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 106

Conread position: 446-866
Cow position:
Alignm length: 421
Alignm identity: 244
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 462-890
Cow position:
Alignm length: 432
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 474-888
Cow position:
Alignm length: 418
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 55

Conread position: 479-811
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 298

Conread position: 479-878
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 234

Conread position: 480-888
Cow position:
Alignm length: 414
Alignm identity: 253
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 16

Conread position: 481-887
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 481-889
Cow position:
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 229

Conread position: 482-889
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 388

Conread position: 485-747
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 11

Conread position: 485-845
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 485-879
Cow position:
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 308

Conread position: 485-929
Cow position:
Alignm length: 448
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 175

Conread position: 491-825
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 491-866
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 491-888
Cow position:
Alignm length: 402
Alignm identity: 256
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 54

Conread position: 492-868
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 45

Conread position: 492-868
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 492-875
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 65, 53

Conread position: 493-884
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 493-891
Cow position:
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 279

Conread position: 494-868
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 185, 58

Conread position: 496-929
Cow position:
Alignm length: 435
Alignm identity: 272
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 403, 379

Conread position: 497-884
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 502-868
Cow position:
Alignm length: 367
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 503-884
Cow position:
Alignm length: 384
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 55

Conread position: 503-1180
Cow position:
Alignm length: 695
Alignm identity: 412
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 39

Conread position: 507-929
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 208

Conread position: 507-1196
Cow position:
Alignm length: 708
Alignm identity: 432
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 50

Conread position: 508-884
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 522-1190
Cow position:
Alignm length: 678
Alignm identity: 395
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 109, 100

Conread position: 556-868
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 84, 80

Conread position: 561-891
Cow position:
Alignm length: 332
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 202, 75

Conread position: 572-878
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 193, 199

Conread position: 574-887
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 616-887
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 148, 154

Conread position: 658-888
Cow position:
Alignm length: 231
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 870-1180
Cow position:
Alignm length: 312
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 242, 221

Conread position: 888-1178
Cow position:
Alignm length: 292
Alignm identity: 183
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 210, 224

Conread position: 888-1180
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 127, 140

Conread position: 888-1187
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 65

Conread position: 888-1187
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 888-1196
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 888-1197
Cow position:
Alignm length: 312
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 52

Conread position: 889-1174
Cow position:
Alignm length: 286
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1175
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 55

Conread position: 889-1175
Cow position:
Alignm length: 288
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 223, 214

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 213, 223

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 129

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 148, 136

Conread position: 889-1178
Cow position:
Alignm length: 292
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 142

Conread position: 889-1178
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 36

Conread position: 889-1178
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1178
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 148, 136

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 127, 134

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 889-1179
Cow position:
Alignm length: 292
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 139

Conread position: 889-1180
Cow position:
Alignm length: 292
Alignm identity: 180
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1180
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 147, 143

Conread position: 889-1180
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 42

Conread position: 889-1180
Cow position:
Alignm length: 292
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1180
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 213, 223

Conread position: 889-1180
Cow position:
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 36

Conread position: 889-1186
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 112

Conread position: 889-1187
Cow position:
Alignm length: 299
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 125, 130

Conread position: 889-1191
Cow position:
Alignm length: 307
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 39, 46

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 132, 112

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 209, 218

Conread position: 889-1192
Cow position:
Alignm length: 304
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1192
Cow position:
Alignm length: 305
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 137

Conread position: 889-1193
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 270, 276

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 111

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 51

Conread position: 889-1196
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 119, 112

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 30

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 139

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 41

Conread position: 889-1197
Cow position:
Alignm length: 311
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 64

Conread position: 889-1199
Cow position:
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 293, 0

Conread position: 889-1199
Cow position:
Alignm length: 311
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1200
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 130, 113

Conread position: 889-1203
Cow position:
Alignm length: 319
Alignm identity: 198
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 42

Conread position: 889-1207
Cow position:
Alignm length: 319
Alignm identity: 205
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1207
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 44

Conread position: 889-1217
Cow position:
Alignm length: 329
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1225
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 209, 223

Conread position: 890-1180
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 213, 222

Conread position: 890-1180
Cow position:
Alignm length: 293
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 208, 222

Conread position: 890-1191
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 189, 68

Conread position: 890-1196
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 222, 58

Conread position: 890-1196
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 138

Conread position: 890-1196
Cow position:
Alignm length: 309
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 276

Conread position: 891-1180
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 268, 274

Conread position: 891-1187
Cow position:
Alignm length: 297
Alignm identity: 193
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1187
Cow position:
Alignm length: 297
Alignm identity: 193
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 136

Conread position: 898-1178
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 899-1178
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 129

Conread position: 899-1204
Cow position:
Alignm length: 308
Alignm identity: 199
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 55

Conread position: 937-1196
Cow position:
Alignm length: 260
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.