Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 233-1180
Cow position: chr2:78754987-78755960 (view UCSC Genome Browser custom track)
Alignm length: 983
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 322

Conread position: 393-844
Cow position: chr2:78755568-78756020 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 290
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 40

Conread position: 393-867
Cow position: chr2:86465080-86465557 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 299
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 40

Conread position: 396-886
Cow position: chr2:86465671-86466164 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 289
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 71

Conread position: 409-888
Cow position: chr2:78754830-78755312 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 409-889
Cow position: chr2:78754914-78755396 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 415-887
Cow position: chr2:78754183-78754655 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 290
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 22

Conread position: 447-742
Cow position: chr2:82800150-82800448 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 16

Conread position: 447-845
Cow position: chr2:82799814-82800215 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 257
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 269

Conread position: 480-866
Cow position: chr2:86465506-86465892 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 223, 232

Conread position: 480-868
Cow position: chr2:82799766-82800154 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 242
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 137

Conread position: 481-889
Cow position: chr2:78755825-78756234 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 250
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 490-776
Cow position: chr2:78756087-78756371 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 27

Conread position: 491-870
Cow position: chr2:78755751-78756130 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 58

Conread position: 491-1207
Cow position: chr2:78754511-78755235 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 135

Conread position: 493-887
Cow position: chr2:82799947-82800341 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 229, 219

Conread position: 495-888
Cow position: chr2:82800031-82800426 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 264
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 31

Conread position: 495-889
Cow position: chr2:78755589-78755981 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 256
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 221, 76

Conread position: 495-1178
Cow position: chr2:78754431-78755122 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 496-868
Cow position: chr2:78754101-78754468 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 233
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 184, 65

Conread position: 501-872
Cow position: chr2:82799619-82799990 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 34

Conread position: 501-887
Cow position: chr2:82799535-82799921 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 41, 34

Conread position: 502-825
Cow position: chr2:82800124-82800447 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 47

Conread position: 503-868
Cow position: chr2:82799453-82799818 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 213, 209

Conread position: 507-749
Cow position: chr2:86465953-86466195 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-836
Cow position: chr2:78756074-78756347 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 40

Conread position: 888-1180
Cow position: chr2:82799526-82799818 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 187
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 224, 213

Conread position: 889-1196
Cow position: chr2:82800115-82800422 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 214, 223

Conread position: 889-1197
Cow position: chr2:82799611-82799919 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 117, 121

Conread position: 889-1207
Cow position: chr2:78755169-78755486 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 144

Conread position: 889-1225
Cow position: chr2:78755001-78755338 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 331, 0

Conread position: 892-1207
Cow position: chr2:78755507-78755819 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 303, 12

Show alignments to all cow chromosomes.