Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 233-1180 |
| Cow position: | chr2:78754987-78755960 (view UCSC Genome Browser custom track) |
| Alignm length: | 983 |
| Alignm identity: | 608 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 322 |
| Conread position: | 393-844 |
| Cow position: | chr2:78755568-78756020 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 393-867 |
| Cow position: | chr2:86465080-86465557 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 396-886 |
| Cow position: | chr2:86465671-86466164 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 409-888 |
| Cow position: | chr2:78754830-78755312 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 409-889 |
| Cow position: | chr2:78754914-78755396 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 415-887 |
| Cow position: | chr2:78754183-78754655 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 447-742 |
| Cow position: | chr2:82800150-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 447-845 |
| Cow position: | chr2:82799814-82800215 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 36, 269 |
| Conread position: | 480-866 |
| Cow position: | chr2:86465506-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 223, 232 |
| Conread position: | 480-868 |
| Cow position: | chr2:82799766-82800154 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 129, 137 |
| Conread position: | 481-889 |
| Cow position: | chr2:78755825-78756234 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 490-776 |
| Cow position: | chr2:78756087-78756371 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 491-870 |
| Cow position: | chr2:78755751-78756130 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 491-1207 |
| Cow position: | chr2:78754511-78755235 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 135 |
| Conread position: | 493-887 |
| Cow position: | chr2:82799947-82800341 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 229, 219 |
| Conread position: | 495-888 |
| Cow position: | chr2:82800031-82800426 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 495-889 |
| Cow position: | chr2:78755589-78755981 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 221, 76 |
| Conread position: | 495-1178 |
| Cow position: | chr2:78754431-78755122 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 496-868 |
| Cow position: | chr2:78754101-78754468 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 184, 65 |
| Conread position: | 501-872 |
| Cow position: | chr2:82799619-82799990 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 501-887 |
| Cow position: | chr2:82799535-82799921 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 502-825 |
| Cow position: | chr2:82800124-82800447 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 503-868 |
| Cow position: | chr2:82799453-82799818 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 213, 209 |
| Conread position: | 507-749 |
| Cow position: | chr2:86465953-86466195 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-836 |
| Cow position: | chr2:78756074-78756347 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 888-1180 |
| Cow position: | chr2:82799526-82799818 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 224, 213 |
| Conread position: | 889-1196 |
| Cow position: | chr2:82800115-82800422 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 889-1197 |
| Cow position: | chr2:82799611-82799919 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 117, 121 |
| Conread position: | 889-1207 |
| Cow position: | chr2:78755169-78755486 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 126, 144 |
| Conread position: | 889-1225 |
| Cow position: | chr2:78755001-78755338 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 892-1207 |
| Cow position: | chr2:78755507-78755819 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 303, 12 |
Show alignments to all cow chromosomes.