Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 198-845 |
| Cow position: | chr22:12400135-12399491 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 220-838 |
| Cow position: | chr22:12399365-12398742 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 220-891 |
| Cow position: | chr22:12399701-12399025 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 221-867 |
| Cow position: | chr22:12399532-12398881 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 222-879 |
| Cow position: | chr22:12399447-12398785 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 241-888 |
| Cow position: | chr22:12476226-12475573 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 195 |
| Conread position: | 241-888 |
| Cow position: | chr22:12499033-12499686 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 119 |
| Conread position: | 242-890 |
| Cow position: | chr22:12432332-12431678 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 388 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 299-875 |
| Cow position: | chr22:12399707-12399125 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 334 |
| Conread position: | 371-871 |
| Cow position: | chr22:46654308-46654812 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 371-879 |
| Cow position: | chr22:46654140-46654652 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 383-890 |
| Cow position: | chr22:12399452-12398942 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 384-860 |
| Cow position: | chr22:12458635-12458156 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 393-838 |
| Cow position: | chr22:12475735-12475287 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 393-838 |
| Cow position: | chr22:12499524-12499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 394-891 |
| Cow position: | chr22:12431505-12431005 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 394-929 |
| Cow position: | chr22:12431839-12431307 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 346 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 395-752 |
| Cow position: | chr22:11641094-11641454 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 395-846 |
| Cow position: | chr22:12431084-12430630 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 395-860 |
| Cow position: | chr22:12431252-12430784 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 395-867 |
| Cow position: | chr22:11640674-11641149 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 395-868 |
| Cow position: | chr22:11640926-11641402 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 58, 237 |
| Conread position: | 395-869 |
| Cow position: | chr22:12418959-12418482 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 395-886 |
| Cow position: | chr22:12475817-12475323 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 395-886 |
| Cow position: | chr22:12499358-12499852 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 395-886 |
| Cow position: | chr22:12499442-12499936 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 395-888 |
| Cow position: | chr22:12458286-12457792 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 395-889 |
| Cow position: | chr22:12475901-12475404 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 378 |
| Conread position: | 404-867 |
| Cow position: | chr22:12385507-12385039 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 408-837 |
| Cow position: | chr22:12385333-12384900 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 408-868 |
| Cow position: | chr22:14429979-14430442 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 62, 399 |
| Conread position: | 408-868 |
| Cow position: | chr22:14430399-14430862 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 409-872 |
| Cow position: | chr22:12431320-12430856 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 6 |
| Conread position: | 434-876 |
| Cow position: | chr22:12399821-12399375 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 417 |
| Conread position: | 437-846 |
| Cow position: | chr22:12431126-12430714 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 437-872 |
| Cow position: | chr22:11640884-11641322 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 279 |
| Conread position: | 459-891 |
| Cow position: | chr22:11701151-11701584 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 462-888 |
| Cow position: | chr22:12399709-12399280 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 321 |
| Conread position: | 475-875 |
| Cow position: | chr22:12385688-12385283 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 235 |
| Conread position: | 478-866 |
| Cow position: | chr22:46653999-46654387 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 128, 151 |
| Conread position: | 479-834 |
| Cow position: | chr22:12458118-12457762 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 228 |
| Conread position: | 479-890 |
| Cow position: | chr22:12385513-12385100 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 150 |
| Conread position: | 480-870 |
| Cow position: | chr22:14429802-14430192 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 308 |
| Conread position: | 480-881 |
| Cow position: | chr22:46654085-46654486 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 480-895 |
| Cow position: | chr22:14430222-14430634 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 481-926 |
| Cow position: | chr22:14468048-14468489 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 482-868 |
| Cow position: | chr22:14429636-14430022 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 290, 297 |
| Conread position: | 485-866 |
| Cow position: | chr22:14429723-14430104 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 488-868 |
| Cow position: | chr22:14441956-14442336 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 224, 215 |
| Conread position: | 489-866 |
| Cow position: | chr22:12431911-12431534 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 491-834 |
| Cow position: | chr22:11641109-11641451 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 215, 223 |
| Conread position: | 491-845 |
| Cow position: | chr22:12498869-12499223 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 130, 156 |
| Conread position: | 491-867 |
| Cow position: | chr22:12498953-12499329 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 363, 357 |
| Conread position: | 491-867 |
| Cow position: | chr22:14468310-14468685 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 491-868 |
| Cow position: | chr22:14468142-14468519 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 228, 216 |
| Conread position: | 491-868 |
| Cow position: | chr22:14468226-14468603 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 138, 132 |
| Conread position: | 491-871 |
| Cow position: | chr22:12476390-12476010 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 159 |
| Conread position: | 491-879 |
| Cow position: | chr22:11640857-11641245 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 219 |
| Conread position: | 491-929 |
| Cow position: | chr22:12476306-12475872 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 274, 280 |
| Conread position: | 492-888 |
| Cow position: | chr22:12399923-12399532 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 493-763 |
| Cow position: | chr22:14430655-14430925 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 493-789 |
| Cow position: | chr22:11701354-11701651 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 493-846 |
| Cow position: | chr22:14430569-14430924 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 493-866 |
| Cow position: | chr22:12458355-12457982 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 270, 275 |
| Conread position: | 493-871 |
| Cow position: | chr22:12431991-12431613 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 272, 292 |
| Conread position: | 493-871 |
| Cow position: | chr22:12432411-12432033 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 149, 142 |
| Conread position: | 494-704 |
| Cow position: | chr22:12419294-12419084 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 192, 186 |
| Conread position: | 494-868 |
| Cow position: | chr22:14467977-14468351 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 146, 135 |
| Conread position: | 495-860 |
| Cow position: | chr22:11701104-11701469 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 132 |
| Conread position: | 495-891 |
| Cow position: | chr22:11666450-11666846 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 145, 131 |
| Conread position: | 496-868 |
| Cow position: | chr22:12419024-12418651 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 218 |
| Conread position: | 501-817 |
| Cow position: | chr22:11666624-11666940 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 502-866 |
| Cow position: | chr22:11640616-11640980 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 219, 210 |
| Conread position: | 502-869 |
| Cow position: | chr22:12458430-12458063 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 345 |
| Conread position: | 508-878 |
| Cow position: | chr22:12418927-12418557 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 508-884 |
| Cow position: | chr22:12458592-12458216 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 519-870 |
| Cow position: | chr22:14429508-14429856 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 519-884 |
| Cow position: | chr22:46653956-46654321 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 560-890 |
| Cow position: | chr22:12432428-12432098 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 162, 146 |
| Conread position: | 561-866 |
| Cow position: | chr22:14467960-14468265 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 162, 152 |
| Conread position: | 561-878 |
| Cow position: | chr22:12458623-12458306 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 562-888 |
| Cow position: | chr22:12476486-12476161 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 563-890 |
| Cow position: | chr22:12476402-12476075 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 163, 143 |
| Conread position: | 563-890 |
| Cow position: | chr22:12498857-12499184 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 153, 143 |
| Conread position: | 571-897 |
| Cow position: | chr22:12385675-12385346 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 226 |
| Conread position: | 573-867 |
| Cow position: | chr22:12432499-12432205 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 152, 146 |
| Conread position: | 576-890 |
| Cow position: | chr22:12399923-12399614 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 580-872 |
| Cow position: | chr22:12419023-12418731 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 587-888 |
| Cow position: | chr22:12498797-12499098 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 587-1180 |
| Cow position: | chr22:14441572-14442168 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 349 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 639-866 |
| Cow position: | chr22:12385689-12385462 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 641-879 |
| Cow position: | chr22:12419315-12419077 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 879-1180 |
| Cow position: | chr22:14429719-14430022 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 233 |
| Conread position: | 883-1184 |
| Cow position: | chr22:12399848-12399548 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 888-1145 |
| Cow position: | chr22:12475549-12475292 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1145 |
| Cow position: | chr22:12499710-12499967 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1174 |
| Cow position: | chr22:12431236-12430950 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 888-1182 |
| Cow position: | chr22:12431068-12430774 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1182 |
| Cow position: | chr22:12458272-12457978 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 888-1187 |
| Cow position: | chr22:12399508-12399209 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1194 |
| Cow position: | chr22:14429814-14430120 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 140 |
| Conread position: | 888-1197 |
| Cow position: | chr22:12475633-12475324 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1197 |
| Cow position: | chr22:12499626-12499935 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1169 |
| Cow position: | chr22:12498955-12499235 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 123, 113 |
| Conread position: | 889-1177 |
| Cow position: | chr22:12458103-12457815 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 889-1178 |
| Cow position: | chr22:12399339-12399050 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 127, 119 |
| Conread position: | 889-1178 |
| Cow position: | chr22:12432243-12431954 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 130 |
| Conread position: | 889-1178 |
| Cow position: | chr22:46654098-46654387 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 889-1179 |
| Cow position: | chr22:12399171-12398881 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 889-1179 |
| Cow position: | chr22:12399675-12399385 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 889-1179 |
| Cow position: | chr22:12476220-12475930 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1179 |
| Cow position: | chr22:12499039-12499329 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 889-1180 |
| Cow position: | chr22:11641111-11641402 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 889-1180 |
| Cow position: | chr22:11701354-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 889-1180 |
| Cow position: | chr22:12458355-12458064 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 184, 167 |
| Conread position: | 889-1180 |
| Cow position: | chr22:14430151-14430442 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 889-1180 |
| Cow position: | chr22:14430235-14430526 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 889-1180 |
| Cow position: | chr22:14468060-14468351 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 889-1182 |
| Cow position: | chr22:12431319-12431026 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 215, 223 |
| Conread position: | 889-1183 |
| Cow position: | chr22:12431907-12431613 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1183 |
| Cow position: | chr22:12432327-12432033 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 889-1183 |
| Cow position: | chr22:12476304-12476010 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 123, 113 |
| Conread position: | 889-1184 |
| Cow position: | chr22:11641027-11641322 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 111 |
| Conread position: | 889-1184 |
| Cow position: | chr22:12431151-12430856 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 889-1184 |
| Cow position: | chr22:12432411-12432116 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 889-1184 |
| Cow position: | chr22:12476052-12475757 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1184 |
| Cow position: | chr22:12499207-12499502 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1187 |
| Cow position: | chr22:12385583-12385283 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 889-1187 |
| Cow position: | chr22:12399423-12399125 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 889-1187 |
| Cow position: | chr22:12431991-12431693 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 889-1190 |
| Cow position: | chr22:12418858-12418557 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 130 |
| Conread position: | 889-1191 |
| Cow position: | chr22:11640943-11641245 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 231, 217 |
| Conread position: | 889-1191 |
| Cow position: | chr22:12399087-12398785 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1191 |
| Cow position: | chr22:12475884-12475582 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 139 |
| Conread position: | 889-1191 |
| Cow position: | chr22:12499543-12499845 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 889-1191 |
| Cow position: | chr22:46654350-46654652 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 205, 223 |
| Conread position: | 889-1193 |
| Cow position: | chr22:14430571-14430875 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 889-1193 |
| Cow position: | chr22:46654182-46654486 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 889-1196 |
| Cow position: | chr22:12385245-12384938 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 889-1196 |
| Cow position: | chr22:12399255-12398948 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 889-1196 |
| Cow position: | chr22:12399591-12399284 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 125, 113 |
| Conread position: | 889-1196 |
| Cow position: | chr22:12458523-12458216 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 118 |
| Conread position: | 889-1197 |
| Cow position: | chr22:12385499-12385189 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 889-1200 |
| Cow position: | chr22:12418942-12418631 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1200 |
| Cow position: | chr22:12499375-12499686 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 130 |
| Conread position: | 889-1203 |
| Cow position: | chr22:14430319-14430629 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 890-1180 |
| Cow position: | chr22:12498872-12499162 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 156 |
| Conread position: | 890-1190 |
| Cow position: | chr22:12476387-12476087 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 125, 156 |
| Conread position: | 890-1196 |
| Cow position: | chr22:12385666-12385358 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 890-1197 |
| Cow position: | chr22:12499292-12499599 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 221, 213 |
| Conread position: | 890-1207 |
| Cow position: | chr22:12475967-12475650 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 891-1169 |
| Cow position: | chr22:12399757-12399479 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1179 |
| Cow position: | chr22:12399918-12399637 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 892-1180 |
| Cow position: | chr22:14429650-14429938 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1186 |
| Cow position: | chr22:12499462-12499756 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1196 |
| Cow position: | chr22:12385410-12385106 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 123, 132 |
| Conread position: | 898-1184 |
| Cow position: | chr22:12419017-12418731 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 130 |
| Conread position: | 915-1178 |
| Cow position: | chr22:46653956-46654219 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 118 |
| Conread position: | 948-1191 |
| Cow position: | chr22:12419320-12419077 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.