Cow genome map
Conread name: | Ss1.1-rste17_k4.5 |
Conread position: | 220-669 |
Cow position: | chr23:25626590-25627044 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 279 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 77, 14 |
Conread position: | 229-836 |
Cow position: | chr23:25660134-25660747 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 371 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 71, 58 |
Conread position: | 300-1196 |
Cow position: | chr23:25626000-25626923 (view UCSC Genome Browser custom track) |
Alignm length: | 929 |
Alignm identity: | 573 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 60 |
Conread position: | 387-872 |
Cow position: | chr23:24522673-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 48 |
Conread position: | 393-867 |
Cow position: | chr23:24547180-24546703 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 89 |
Conread position: | 395-669 |
Cow position: | chr23:24560402-24560125 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 187 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 395-725 |
Cow position: | chr23:24522500-24522167 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 213 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 28, 41 |
Conread position: | 395-749 |
Cow position: | chr23:24535809-24535452 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 221 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 28 |
Conread position: | 395-847 |
Cow position: | chr23:24639620-24640075 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 376 |
Conread position: | 395-866 |
Cow position: | chr23:24547094-24546621 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 306 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 395-878 |
Cow position: | chr23:25698588-25698102 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 308 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 83, 145 |
Conread position: | 395-888 |
Cow position: | chr23:24547262-24546766 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 395-888 |
Cow position: | chr23:24560654-24560158 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 395-888 |
Cow position: | chr23:25660219-25660715 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 396-879 |
Cow position: | chr23:24535976-24535490 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 101 |
Conread position: | 397-867 |
Cow position: | chr23:24639454-24639927 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 374 |
Conread position: | 434-888 |
Cow position: | chr23:25626557-25627011 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 7 |
Conread position: | 435-750 |
Cow position: | chr23:25626721-25627041 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 207 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 11, 105 |
Conread position: | 444-846 |
Cow position: | chr23:24626341-24626744 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 38 |
Conread position: | 448-879 |
Cow position: | chr23:24639337-24639771 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 279 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 41, 37 |
Conread position: | 481-870 |
Cow position: | chr23:24639208-24639595 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 248 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 209, 10 |
Conread position: | 489-868 |
Cow position: | chr23:25698659-25698280 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 235 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 54, 48 |
Conread position: | 491-760 |
Cow position: | chr23:24654116-24654385 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 177 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 212, 219 |
Conread position: | 491-872 |
Cow position: | chr23:25660150-25660531 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 251 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 212, 225 |
Conread position: | 491-887 |
Cow position: | chr23:24639299-24639695 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 255 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 82, 90 |
Conread position: | 491-905 |
Cow position: | chr23:24639467-24639879 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 5 |
Conread position: | 492-890 |
Cow position: | chr23:24536047-24535647 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 492-929 |
Cow position: | chr23:24560890-24560457 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 399, 0 |
Conread position: | 493-750 |
Cow position: | chr23:24560385-24560128 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 176 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-844 |
Cow position: | chr23:25724042-25723692 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 233 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 39, 69 |
Conread position: | 493-879 |
Cow position: | chr23:24626309-24626695 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 45 |
Conread position: | 493-889 |
Cow position: | chr23:24560805-24560409 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 256 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 361, 355 |
Conread position: | 493-889 |
Cow position: | chr23:24639635-24640033 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 277 |
Conread position: | 494-855 |
Cow position: | chr23:24654034-24654396 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 242 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 8, 275 |
Conread position: | 494-887 |
Cow position: | chr23:24522129-24521750 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 249 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 271, 8 |
Conread position: | 502-887 |
Cow position: | chr23:24547320-24546935 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 269 |
Conread position: | 513-866 |
Cow position: | chr23:25724106-25723753 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 240 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 30, 10 |
Conread position: | 516-868 |
Cow position: | chr23:24626251-24626600 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 238 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 56, 10 |
Conread position: | 560-888 |
Cow position: | chr23:24560906-24560578 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 204 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 294, 287 |
Conread position: | 571-866 |
Cow position: | chr23:25660146-25660441 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 197 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 217, 227 |
Conread position: | 571-902 |
Cow position: | chr23:24536050-24535720 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 207 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 193, 199 |
Conread position: | 572-1179 |
Cow position: | chr23:24547334-24546703 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 112 |
Conread position: | 575-872 |
Cow position: | chr23:25698657-25698360 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 198 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 35, 51 |
Conread position: | 575-887 |
Cow position: | chr23:24522569-24522257 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 209 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 136, 131 |
Conread position: | 577-891 |
Cow position: | chr23:24522814-24522505 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 199 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 244, 27 |
Conread position: | 592-888 |
Cow position: | chr23:24639232-24639528 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 193 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 149, 157 |
Conread position: | 592-890 |
Cow position: | chr23:25724111-25723813 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 202 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 172, 178 |
Conread position: | 630-887 |
Cow position: | chr23:24626278-24626535 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 172 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 134, 146 |
Conread position: | 653-891 |
Cow position: | chr23:24654024-24654264 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 163 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 11, 119 |
Conread position: | 654-875 |
Cow position: | chr23:25660145-25660366 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 151 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 110, 116 |
Conread position: | 793-1184 |
Cow position: | chr23:25698760-25698360 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 249 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 69, 321 |
Conread position: | 871-1095 |
Cow position: | chr23:24654097-24654324 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 154 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 20, 55 |
Conread position: | 889-1080 |
Cow position: | chr23:24626561-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 126, 130 |
Conread position: | 889-1157 |
Cow position: | chr23:24626477-24626743 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 172 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 214, 223 |
Conread position: | 889-1178 |
Cow position: | chr23:24522567-24522278 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 194 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 126, 134 |
Conread position: | 889-1178 |
Cow position: | chr23:24639301-24639590 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 184 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 40, 46 |
Conread position: | 889-1179 |
Cow position: | chr23:25698487-25698197 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 182 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 126, 137 |
Conread position: | 889-1180 |
Cow position: | chr23:24560553-24560262 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 189 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1180 |
Cow position: | chr23:24626309-24626600 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 197 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1184 |
Cow position: | chr23:24522483-24522188 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 194 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 42, 48 |
Conread position: | 889-1184 |
Cow position: | chr23:25660236-25660531 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 189 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 154, 119 |
Conread position: | 889-1185 |
Cow position: | chr23:25660404-25660700 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 193 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 126, 130 |
Conread position: | 889-1191 |
Cow position: | chr23:24535960-24535658 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 197 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1191 |
Cow position: | chr23:24547329-24547027 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 200 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 44, 30 |
Conread position: | 889-1191 |
Cow position: | chr23:24626393-24626695 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 223 |
Conread position: | 889-1196 |
Cow position: | chr23:24522814-24522512 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 195 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 219, 24 |
Conread position: | 889-1196 |
Cow position: | chr23:24547077-24546770 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 200 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 46, 42 |
Conread position: | 889-1196 |
Cow position: | chr23:24547245-24546938 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 198 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 47, 42 |
Conread position: | 889-1196 |
Cow position: | chr23:24639553-24639860 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 197 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 214, 223 |
Conread position: | 889-1199 |
Cow position: | chr23:24639637-24639947 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 193 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 42, 46 |
Conread position: | 889-1199 |
Cow position: | chr23:25724042-25723732 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 193 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 214, 223 |
Conread position: | 889-1205 |
Cow position: | chr23:25660320-25660633 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 199 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 291, 0 |
Conread position: | 889-1207 |
Cow position: | chr23:24560469-24560151 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 211 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1207 |
Cow position: | chr23:24560805-24560487 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 199 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1207 |
Cow position: | chr23:25626199-25626517 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 195 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 889-1217 |
Cow position: | chr23:25626700-25627028 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 203 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 47, 36 |
Conread position: | 890-1191 |
Cow position: | chr23:24522647-24522349 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 206 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 75, 37 |
Conread position: | 890-1191 |
Cow position: | chr23:24535791-24535490 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 194 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 125, 133 |
Conread position: | 892-1180 |
Cow position: | chr23:24560718-24560430 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 183 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 123, 131 |
Conread position: | 898-1179 |
Cow position: | chr23:24535867-24535586 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 176 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 111, 102 |
Conread position: | 909-1207 |
Cow position: | chr23:25724106-25723808 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 189 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 26, 13 |
Show alignments to all cow chromosomes.