Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 231-887
Cow position:
Alignm length: 664
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 240-845
Cow position:
Alignm length: 618
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 308-888
Cow position:
Alignm length: 587
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 383-868
Cow position:
Alignm length: 493
Alignm identity: 314
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 78, 99

Conread position: 383-884
Cow position:
Alignm length: 507
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 383-888
Cow position:
Alignm length: 509
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 394-835
Cow position:
Alignm length: 446
Alignm identity: 283
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 8

Conread position: 395-687
Cow position:
Alignm length: 298
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 38

Conread position: 395-767
Cow position:
Alignm length: 378
Alignm identity: 232
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 241

Conread position: 395-868
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 395-878
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 395-879
Cow position:
Alignm length: 488
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 395-887
Cow position:
Alignm length: 500
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 396-841
Cow position:
Alignm length: 452
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 36

Conread position: 397-844
Cow position:
Alignm length: 451
Alignm identity: 284
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 98, 444

Conread position: 400-886
Cow position:
Alignm length: 491
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 82

Conread position: 411-890
Cow position:
Alignm length: 486
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 438-886
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 444-634
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 80

Conread position: 479-888
Cow position:
Alignm length: 412
Alignm identity: 265
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 369

Conread position: 491-845
Cow position:
Alignm length: 356
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 279

Conread position: 491-846
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 0

Conread position: 491-888
Cow position:
Alignm length: 399
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 298, 302

Conread position: 493-718
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 493-878
Cow position:
Alignm length: 386
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 496-846
Cow position:
Alignm length: 353
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 209

Conread position: 556-888
Cow position:
Alignm length: 333
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 561-884
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 143, 155

Conread position: 571-887
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 46

Conread position: 575-787
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 135

Conread position: 592-888
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 88, 64

Conread position: 659-1062
Cow position:
Alignm length: 406
Alignm identity: 254
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 356, 222

Conread position: 880-1196
Cow position:
Alignm length: 320
Alignm identity: 210
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 19, 226

Conread position: 888-1180
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 127, 131

Conread position: 888-1180
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 126, 131

Conread position: 888-1190
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 122

Conread position: 888-1191
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 149, 144

Conread position: 888-1197
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 210, 224

Conread position: 888-1207
Cow position:
Alignm length: 321
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 113, 122

Conread position: 889-1093
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 51

Conread position: 889-1147
Cow position:
Alignm length: 259
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1151
Cow position:
Alignm length: 264
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 134

Conread position: 889-1173
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 42

Conread position: 889-1180
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 46

Conread position: 889-1190
Cow position:
Alignm length: 304
Alignm identity: 192
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 134

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 121

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 212, 223

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 124, 112

Conread position: 889-1191
Cow position:
Alignm length: 307
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 145

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 134

Conread position: 889-1196
Cow position:
Alignm length: 311
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 29

Conread position: 889-1200
Cow position:
Alignm length: 313
Alignm identity: 199
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 213, 223

Conread position: 889-1200
Cow position:
Alignm length: 312
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1207
Cow position:
Alignm length: 319
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 890-1207
Cow position:
Alignm length: 318
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 901-1180
Cow position:
Alignm length: 282
Alignm identity: 180
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 38

Conread position: 904-1207
Cow position:
Alignm length: 305
Alignm identity: 193
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 200, 63

Conread position: 913-1191
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 61

Show alignments to all cow chromosomes.