Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 222-888 |
| Cow position: | chr25:34769980-34769309 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 233-817 |
| Cow position: | chr25:33299305-33299888 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 351 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 151, 399 |
| Conread position: | 383-868 |
| Cow position: | chr25:34769733-34769245 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 383-884 |
| Cow position: | chr25:34769901-34769397 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 330 |
| Conread position: | 395-786 |
| Cow position: | chr25:34714101-34714495 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 174 |
| Conread position: | 395-833 |
| Cow position: | chr25:34769637-34769196 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 395-867 |
| Cow position: | chr25:33306064-33305596 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 217 |
| Conread position: | 395-883 |
| Cow position: | chr25:34447257-34447746 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 395-934 |
| Cow position: | chr25:33157322-33156784 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 396-737 |
| Cow position: | chr25:23420535-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 85, 318 |
| Conread position: | 397-692 |
| Cow position: | chr25:414787-414497 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 397-891 |
| Cow position: | chr25:34447091-34447588 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 400-775 |
| Cow position: | chr25:34714190-34714566 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 151 |
| Conread position: | 400-824 |
| Cow position: | chr25:33127790-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 408-877 |
| Cow position: | chr25:36800381-36800847 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 408-886 |
| Cow position: | chr25:33298558-33299040 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 409-884 |
| Cow position: | chr25:23420380-23420858 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 364 |
| Conread position: | 409-886 |
| Cow position: | chr25:36800712-36801192 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 304 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 134 |
| Conread position: | 409-889 |
| Cow position: | chr25:33298644-33299127 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 305 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 409-889 |
| Cow position: | chr25:36801372-36801855 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 409-1196 |
| Cow position: | chr25:36800880-36801682 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 412-879 |
| Cow position: | chr25:34770124-34769654 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 413-693 |
| Cow position: | chr25:33305717-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 200 |
| Conread position: | 415-891 |
| Cow position: | chr25:34713870-34714348 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 420-865 |
| Cow position: | chr25:36800640-36801087 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 435-830 |
| Cow position: | chr25:33145035-33145435 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 436-663 |
| Cow position: | chr25:33127992-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 443-879 |
| Cow position: | chr25:33157441-33157003 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 444-886 |
| Cow position: | chr25:33298847-33299292 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 42, 346 |
| Conread position: | 444-888 |
| Cow position: | chr25:34447222-34447669 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 446-867 |
| Cow position: | chr25:33306428-33306009 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 459-886 |
| Cow position: | chr25:33299116-33299544 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 330 |
| Conread position: | 465-891 |
| Cow position: | chr25:34433577-34434000 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 467-886 |
| Cow position: | chr25:36800521-36800940 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 472-889 |
| Cow position: | chr25:36801354-36801771 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 246, 253 |
| Conread position: | 480-1197 |
| Cow position: | chr25:36800870-36801599 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 156 |
| Conread position: | 481-1179 |
| Cow position: | chr25:33305810-33305113 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 71 |
| Conread position: | 485-868 |
| Cow position: | chr25:34714110-34714493 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 206, 228 |
| Conread position: | 485-886 |
| Cow position: | chr25:33299395-33299796 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 488-866 |
| Cow position: | chr25:33298473-33298852 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 309 |
| Conread position: | 489-766 |
| Cow position: | chr25:18642175-18641894 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 490-835 |
| Cow position: | chr25:326919-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 490-873 |
| Cow position: | chr25:22235824-22236209 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 490-886 |
| Cow position: | chr25:33305322-33304929 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 274, 204 |
| Conread position: | 490-888 |
| Cow position: | chr25:34433521-34433915 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 247, 86 |
| Conread position: | 491-754 |
| Cow position: | chr25:327005-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 491-763 |
| Cow position: | chr25:36801709-36801977 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 127 |
| Conread position: | 491-872 |
| Cow position: | chr25:33144847-33145225 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 491-884 |
| Cow position: | chr25:33127800-33128193 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 362 |
| Conread position: | 491-886 |
| Cow position: | chr25:33299065-33299460 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 308 |
| Conread position: | 491-886 |
| Cow position: | chr25:33299233-33299628 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 273, 295 |
| Conread position: | 491-889 |
| Cow position: | chr25:33299317-33299715 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 135 |
| Conread position: | 491-896 |
| Cow position: | chr25:33298813-33299217 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 0 |
| Conread position: | 492-822 |
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 492-884 |
| Cow position: | chr25:34446937-34447329 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 492-886 |
| Cow position: | chr25:36801542-36801936 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 272, 294 |
| Conread position: | 492-890 |
| Cow position: | chr25:34447021-34447419 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-1196 |
| Cow position: | chr25:34433020-34433744 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 451 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 206, 227 |
| Conread position: | 494-860 |
| Cow position: | chr25:33305401-33305039 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 271, 83 |
| Conread position: | 495-867 |
| Cow position: | chr25:33298985-33299357 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 116, 131 |
| Conread position: | 495-890 |
| Cow position: | chr25:33298565-33298960 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 135 |
| Conread position: | 495-1196 |
| Cow position: | chr25:33305878-33305180 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 429 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 215, 60 |
| Conread position: | 502-821 |
| Cow position: | chr25:34732095-34731776 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 208, 199 |
| Conread position: | 502-866 |
| Cow position: | chr25:34714043-34714407 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 503-888 |
| Cow position: | chr25:33157463-33157078 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 507-884 |
| Cow position: | chr25:36800645-36801022 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 150, 143 |
| Conread position: | 507-888 |
| Cow position: | chr25:33127732-33128113 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 508-888 |
| Cow position: | chr25:34770109-34769729 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 262 |
| Conread position: | 511-891 |
| Cow position: | chr25:23420317-23420697 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 512-867 |
| Cow position: | chr25:33145033-33145388 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 106, 115 |
| Conread position: | 513-885 |
| Cow position: | chr25:34446874-34447246 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 251, 255 |
| Conread position: | 514-824 |
| Cow position: | chr25:346469-346779 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 517-868 |
| Cow position: | chr25:33157532-33157182 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 561-800 |
| Cow position: | chr25:34433004-34433244 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 561-888 |
| Cow position: | chr25:34713850-34714177 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 563-860 |
| Cow position: | chr25:34433510-34433802 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 566-891 |
| Cow position: | chr25:33127707-33128032 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 147 |
| Conread position: | 568-888 |
| Cow position: | chr25:33298470-33298790 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 87 |
| Conread position: | 572-872 |
| Cow position: | chr25:346443-346743 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 191, 202 |
| Conread position: | 572-878 |
| Cow position: | chr25:22235823-22236130 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 211 |
| Conread position: | 574-888 |
| Cow position: | chr25:33144846-33145157 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 171, 166 |
| Conread position: | 576-872 |
| Cow position: | chr25:366724-367020 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 187, 198 |
| Conread position: | 578-866 |
| Cow position: | chr25:326924-327213 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 590-875 |
| Cow position: | chr25:414761-414482 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 175, 9 |
| Conread position: | 639-929 |
| Cow position: | chr25:34770146-34769860 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 131 |
| Conread position: | 640-888 |
| Cow position: | chr25:33157494-33157246 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 643-1178 |
| Cow position: | chr25:23420046-23420588 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 131, 30 |
| Conread position: | 657-887 |
| Cow position: | chr25:34446934-34447164 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 658-891 |
| Cow position: | chr25:33144846-33145076 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 873-1187 |
| Cow position: | chr25:34770142-34769826 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 885-1093 |
| Cow position: | chr25:34433016-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 889-1169 |
| Cow position: | chr25:33157221-33156941 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 889-1173 |
| Cow position: | chr25:33299487-33299771 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 889-1177 |
| Cow position: | chr25:36800799-36801087 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 889-1178 |
| Cow position: | chr25:34447274-34447563 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 229, 220 |
| Conread position: | 889-1179 |
| Cow position: | chr25:33298731-33299021 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 889-1180 |
| Cow position: | chr25:33157389-33157098 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 215, 223 |
| Conread position: | 889-1180 |
| Cow position: | chr25:34769536-34769245 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1183 |
| Cow position: | chr25:33157053-33156760 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 889-1187 |
| Cow position: | chr25:23420467-23420765 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 214 |
| Conread position: | 889-1191 |
| Cow position: | chr25:33157305-33157003 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 214, 221 |
| Conread position: | 889-1191 |
| Cow position: | chr25:34769956-34769654 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1191 |
| Cow position: | chr25:36801627-36801929 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 889-1192 |
| Cow position: | chr25:34447358-34447661 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 124, 118 |
| Conread position: | 889-1196 |
| Cow position: | chr25:23420383-23420690 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr25:23420551-23420858 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr25:33157137-33156830 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 196, 217 |
| Conread position: | 889-1196 |
| Cow position: | chr25:33298647-33298954 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 889-1196 |
| Cow position: | chr25:34447022-34447329 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 214, 221 |
| Conread position: | 889-1196 |
| Cow position: | chr25:34769620-34769313 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 889-1196 |
| Cow position: | chr25:34769704-34769397 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1197 |
| Cow position: | chr25:33298815-33299123 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 130 |
| Conread position: | 889-1197 |
| Cow position: | chr25:33298899-33299207 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1197 |
| Cow position: | chr25:33299151-33299459 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 133, 112 |
| Conread position: | 889-1197 |
| Cow position: | chr25:33299235-33299543 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 889-1197 |
| Cow position: | chr25:33299403-33299711 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 889-1197 |
| Cow position: | chr25:34769788-34769480 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 889-1197 |
| Cow position: | chr25:36801543-36801851 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 123, 134 |
| Conread position: | 889-1200 |
| Cow position: | chr25:33298479-33298790 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1200 |
| Cow position: | chr25:36801711-36802015 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 123, 130 |
| Conread position: | 889-1201 |
| Cow position: | chr25:33127802-33128114 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 889-1205 |
| Cow position: | chr25:34447190-34447504 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 214, 223 |
| Conread position: | 889-1207 |
| Cow position: | chr25:34769872-34769554 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 889-1218 |
| Cow position: | chr25:34770040-34769711 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 889-1225 |
| Cow position: | chr25:33127886-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 889-1225 |
| Cow position: | chr25:34447106-34447444 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 891-1197 |
| Cow position: | chr25:33298985-33299291 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 895-1198 |
| Cow position: | chr25:33145104-33145409 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 120, 128 |
| Conread position: | 899-1180 |
| Cow position: | chr25:33157463-33157182 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 201, 206 |
| Conread position: | 903-1191 |
| Cow position: | chr25:33127732-33128020 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 934-1210 |
| Cow position: | chr25:34770163-34769887 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 39 |
Show alignments to all cow chromosomes.