Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 222-888
Cow position:
Alignm length: 676
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 12

Conread position: 233-817
Cow position:
Alignm length: 593
Alignm identity: 351
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 151, 399

Conread position: 383-868
Cow position:
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 383-884
Cow position:
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 330

Conread position: 395-786
Cow position:
Alignm length: 399
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 174

Conread position: 395-833
Cow position:
Alignm length: 447
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 22

Conread position: 395-867
Cow position:
Alignm length: 476
Alignm identity: 282
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 217

Conread position: 395-883
Cow position:
Alignm length: 495
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 395-934
Cow position:
Alignm length: 545
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 38

Conread position: 396-737
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 318

Conread position: 397-692
Cow position:
Alignm length: 296
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 397-891
Cow position:
Alignm length: 500
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 400-775
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 151

Conread position: 400-824
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 31

Conread position: 408-877
Cow position:
Alignm length: 476
Alignm identity: 284
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 25

Conread position: 408-886
Cow position:
Alignm length: 486
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 31

Conread position: 409-884
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 364

Conread position: 409-886
Cow position:
Alignm length: 483
Alignm identity: 304
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 134

Conread position: 409-889
Cow position:
Alignm length: 487
Alignm identity: 305
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 58

Conread position: 409-889
Cow position:
Alignm length: 487
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 409-1196
Cow position:
Alignm length: 805
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 412-879
Cow position:
Alignm length: 472
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 413-693
Cow position:
Alignm length: 286
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 200

Conread position: 415-891
Cow position:
Alignm length: 483
Alignm identity: 287
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 19

Conread position: 420-865
Cow position:
Alignm length: 449
Alignm identity: 273
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 11

Conread position: 435-830
Cow position:
Alignm length: 404
Alignm identity: 258
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 11, 111

Conread position: 436-663
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 48

Conread position: 443-879
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 38

Conread position: 444-886
Cow position:
Alignm length: 448
Alignm identity: 286
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 346

Conread position: 444-888
Cow position:
Alignm length: 451
Alignm identity: 290
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 38

Conread position: 446-867
Cow position:
Alignm length: 432
Alignm identity: 274
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 86

Conread position: 459-886
Cow position:
Alignm length: 430
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 330

Conread position: 465-891
Cow position:
Alignm length: 430
Alignm identity: 269
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 78

Conread position: 467-886
Cow position:
Alignm length: 420
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 472-889
Cow position:
Alignm length: 419
Alignm identity: 259
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 246, 253

Conread position: 480-1197
Cow position:
Alignm length: 733
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 156

Conread position: 481-1179
Cow position:
Alignm length: 709
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 71

Conread position: 485-868
Cow position:
Alignm length: 388
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 206, 228

Conread position: 485-886
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 54

Conread position: 488-866
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 309

Conread position: 489-766
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 490-835
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 15

Conread position: 490-873
Cow position:
Alignm length: 389
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 57

Conread position: 490-886
Cow position:
Alignm length: 400
Alignm identity: 256
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 274, 204

Conread position: 490-888
Cow position:
Alignm length: 401
Alignm identity: 254
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 247, 86

Conread position: 491-754
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 56

Conread position: 491-763
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 127

Conread position: 491-872
Cow position:
Alignm length: 383
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 111, 104

Conread position: 491-884
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 362

Conread position: 491-886
Cow position:
Alignm length: 397
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 308

Conread position: 491-886
Cow position:
Alignm length: 397
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 273, 295

Conread position: 491-889
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 135

Conread position: 491-896
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 0

Conread position: 492-822
Cow position:
Alignm length: 333
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 43

Conread position: 492-884
Cow position:
Alignm length: 394
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 492-886
Cow position:
Alignm length: 396
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 272, 294

Conread position: 492-890
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 493-1196
Cow position:
Alignm length: 734
Alignm identity: 451
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 206, 227

Conread position: 494-860
Cow position:
Alignm length: 369
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 271, 83

Conread position: 495-867
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 116, 131

Conread position: 495-890
Cow position:
Alignm length: 397
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 135

Conread position: 495-1196
Cow position:
Alignm length: 713
Alignm identity: 429
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 215, 60

Conread position: 502-821
Cow position:
Alignm length: 321
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 208, 199

Conread position: 502-866
Cow position:
Alignm length: 367
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 21

Conread position: 503-888
Cow position:
Alignm length: 388
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 507-884
Cow position:
Alignm length: 381
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 150, 143

Conread position: 507-888
Cow position:
Alignm length: 383
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 508-888
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 262

Conread position: 511-891
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 512-867
Cow position:
Alignm length: 359
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 115

Conread position: 513-885
Cow position:
Alignm length: 374
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 251, 255

Conread position: 514-824
Cow position:
Alignm length: 313
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 21

Conread position: 517-868
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 24

Conread position: 561-800
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 203, 0

Conread position: 561-888
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 66

Conread position: 563-860
Cow position:
Alignm length: 302
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 69

Conread position: 566-891
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 159, 147

Conread position: 568-888
Cow position:
Alignm length: 323
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 87

Conread position: 572-872
Cow position:
Alignm length: 303
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 191, 202

Conread position: 572-878
Cow position:
Alignm length: 309
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 211

Conread position: 574-888
Cow position:
Alignm length: 317
Alignm identity: 203
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 171, 166

Conread position: 576-872
Cow position:
Alignm length: 299
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 187, 198

Conread position: 578-866
Cow position:
Alignm length: 294
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 19

Conread position: 590-875
Cow position:
Alignm length: 287
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 175, 9

Conread position: 639-929
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 131

Conread position: 640-888
Cow position:
Alignm length: 251
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 11

Conread position: 643-1178
Cow position:
Alignm length: 548
Alignm identity: 329
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 30

Conread position: 657-887
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 114

Conread position: 658-891
Cow position:
Alignm length: 234
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 190, 0

Conread position: 873-1187
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 885-1093
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 50

Conread position: 889-1169
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 214, 223

Conread position: 889-1173
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 131

Conread position: 889-1177
Cow position:
Alignm length: 291
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 52

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 229, 220

Conread position: 889-1179
Cow position:
Alignm length: 292
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 51

Conread position: 889-1180
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 215, 223

Conread position: 889-1180
Cow position:
Alignm length: 292
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1183
Cow position:
Alignm length: 297
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 64

Conread position: 889-1187
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 214

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 214, 221

Conread position: 889-1191
Cow position:
Alignm length: 303
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 50

Conread position: 889-1192
Cow position:
Alignm length: 306
Alignm identity: 194
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 118

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 196, 217

Conread position: 889-1196
Cow position:
Alignm length: 311
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 54

Conread position: 889-1196
Cow position:
Alignm length: 309
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 214, 221

Conread position: 889-1196
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 143

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1197
Cow position:
Alignm length: 311
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 130

Conread position: 889-1197
Cow position:
Alignm length: 309
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1197
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 112

Conread position: 889-1197
Cow position:
Alignm length: 311
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 50

Conread position: 889-1197
Cow position:
Alignm length: 310
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 148, 143

Conread position: 889-1197
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 36

Conread position: 889-1197
Cow position:
Alignm length: 311
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 134

Conread position: 889-1200
Cow position:
Alignm length: 312
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1200
Cow position:
Alignm length: 313
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 130

Conread position: 889-1201
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 214, 223

Conread position: 889-1205
Cow position:
Alignm length: 318
Alignm identity: 199
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 214, 223

Conread position: 889-1207
Cow position:
Alignm length: 320
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 64

Conread position: 889-1218
Cow position:
Alignm length: 331
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 64

Conread position: 889-1225
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 309, 0

Conread position: 889-1225
Cow position:
Alignm length: 341
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 64

Conread position: 891-1197
Cow position:
Alignm length: 307
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 895-1198
Cow position:
Alignm length: 309
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 128

Conread position: 899-1180
Cow position:
Alignm length: 284
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 201, 206

Conread position: 903-1191
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 934-1210
Cow position:
Alignm length: 279
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 39

Show alignments to all cow chromosomes.