Cow genome map


           Conread name:
           Ss1.1-rste17_k4.5
        

               Conread position:
               231-777
               

               Cow position:
               chr27:21615955-21615404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               342
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               145, 123
               

               Conread position:
               404-883
               

               Cow position:
               chr27:21615947-21615464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               459-879
               

               Cow position:
               chr27:21615973-21615554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               486-845
               

               Cow position:
               chr27:21615778-21615420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               497-884
               

               Cow position:
               chr27:21616018-21615632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               113, 71
               

               Conread position:
               515-890
               

               Cow position:
               chr27:21616092-21615710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               889-1195
               

               Cow position:
               chr27:21615771-21615464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 93
               

               Conread position:
               889-1196
               

               Cow position:
               chr27:21615939-21615632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 131
               

               Conread position:
               890-1172
               

               Cow position:
               chr27:21615686-21615405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               222, 141
               
Show alignments to all cow chromosomes.