Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 229-878
Cow position:
Alignm length: 664
Alignm identity: 397
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 9

Conread position: 237-866
Cow position:
Alignm length: 633
Alignm identity: 380
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 222, 123

Conread position: 244-889
Cow position:
Alignm length: 654
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 308-889
Cow position:
Alignm length: 588
Alignm identity: 363
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 68

Conread position: 341-889
Cow position:
Alignm length: 557
Alignm identity: 336
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 122

Conread position: 383-889
Cow position:
Alignm length: 511
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 159

Conread position: 395-859
Cow position:
Alignm length: 472
Alignm identity: 297
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 5

Conread position: 395-1173
Cow position:
Alignm length: 795
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 405-879
Cow position:
Alignm length: 484
Alignm identity: 306
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 24

Conread position: 409-669
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 409-874
Cow position:
Alignm length: 469
Alignm identity: 298
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 22

Conread position: 409-884
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 409-886
Cow position:
Alignm length: 483
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 413-866
Cow position:
Alignm length: 460
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 434-750
Cow position:
Alignm length: 320
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 263

Conread position: 444-860
Cow position:
Alignm length: 422
Alignm identity: 274
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 23

Conread position: 447-802
Cow position:
Alignm length: 361
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 327

Conread position: 455-886
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 240

Conread position: 464-867
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 307

Conread position: 474-853
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 290, 296

Conread position: 481-1197
Cow position:
Alignm length: 733
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 244

Conread position: 482-1180
Cow position:
Alignm length: 727
Alignm identity: 439
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 51

Conread position: 485-781
Cow position:
Alignm length: 298
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 277, 175

Conread position: 488-845
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 6

Conread position: 491-750
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 491-866
Cow position:
Alignm length: 382
Alignm identity: 248
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 51, 123

Conread position: 491-1173
Cow position:
Alignm length: 695
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 130

Conread position: 493-861
Cow position:
Alignm length: 374
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 50

Conread position: 493-873
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 277

Conread position: 493-999
Cow position:
Alignm length: 529
Alignm identity: 336
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 67, 53

Conread position: 494-763
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 495-886
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 70

Conread position: 495-1191
Cow position:
Alignm length: 707
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 291

Conread position: 496-884
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 295

Conread position: 496-886
Cow position:
Alignm length: 394
Alignm identity: 241
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 273

Conread position: 502-1178
Cow position:
Alignm length: 690
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 169

Conread position: 513-867
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 251, 0

Conread position: 529-890
Cow position:
Alignm length: 369
Alignm identity: 231
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 61

Conread position: 539-891
Cow position:
Alignm length: 354
Alignm identity: 235
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 161, 85

Conread position: 586-889
Cow position:
Alignm length: 307
Alignm identity: 192
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 32

Conread position: 596-1207
Cow position:
Alignm length: 629
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 175

Conread position: 870-1196
Cow position:
Alignm length: 329
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 11

Conread position: 889-1149
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 42

Conread position: 889-1178
Cow position:
Alignm length: 290
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 889-1184
Cow position:
Alignm length: 297
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 215, 40

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 112

Conread position: 889-1191
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 50

Conread position: 889-1191
Cow position:
Alignm length: 303
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1191
Cow position:
Alignm length: 304
Alignm identity: 190
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 13

Conread position: 889-1191
Cow position:
Alignm length: 308
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 217

Conread position: 889-1197
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 42

Conread position: 891-1197
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 60

Conread position: 892-1178
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 121, 109

Conread position: 892-1196
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 123, 8

Show alignments to all cow chromosomes.