Cow genome map


           Conread name:
           Ss1.1-rste17_k4.5
        

               Conread position:
               434-870
               

               Cow position:
               chr4:42315098-42314659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 194
               

               Conread position:
               491-762
               

               Cow position:
               chr4:42314199-42313928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               137, 127
               

               Conread position:
               491-868
               

               Cow position:
               chr4:42314620-42314242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               493-847
               

               Cow position:
               chr4:42314282-42313927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               493-868
               

               Cow position:
               chr4:42315288-42314913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               562-867
               

               Cow position:
               chr4:42314799-42314495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               888-1185
               

               Cow position:
               chr4:42314283-42313985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 44
               
Show alignments to all cow chromosomes.