Cow genome map


           Conread name:
           Ss1.1-rste17_k4.5
        

               Conread position:
               17-878
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               511
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               140, 131
               

               Conread position:
               235-884
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               380
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               6, 53
               

               Conread position:
               387-875
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               395-868
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               395-868
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               90, 456
               

               Conread position:
               395-875
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               395-878
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               404-878
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               404-880
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               408-884
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               447-879
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               489-884
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               491-872
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               363, 357
               

               Conread position:
               491-879
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               232, 215
               

               Conread position:
               493-878
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-884
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               160, 144
               

               Conread position:
               541-875
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               175, 171
               

               Conread position:
               618-875
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 94
               

               Conread position:
               889-1180
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               125, 137
               

               Conread position:
               889-1180
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               121, 112
               

               Conread position:
               889-1180
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               889-1187
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               214, 223
               

               Conread position:
               889-1187
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               889-1187
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 113
               

               Conread position:
               889-1187
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               223, 212
               

               Conread position:
               889-1190
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 130
               

               Conread position:
               889-1192
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 118
               

               Conread position:
               889-1196
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               272, 0
               
Show alignments to all cow chromosomes.