Cow genome map
| Conread name: | Ss1.1-rste17_k4.5 |
| Conread position: | 233-884 |
| Cow position: | chr7:1014757-1015414 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 233-887 |
| Cow position: | chr7:3180019-3180679 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 233-1191 |
| Cow position: | chr7:42879206-42878217 (view UCSC Genome Browser custom track) |
| Alignm length: | 995 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 127 |
| Conread position: | 241-874 |
| Cow position: | chr7:3179859-3180499 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 119 |
| Conread position: | 241-891 |
| Cow position: | chr7:3179943-3180599 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 249-887 |
| Cow position: | chr7:3179700-3180343 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 340-887 |
| Cow position: | chr7:1014282-1014829 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 361-886 |
| Cow position: | chr7:18390025-18390555 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 378-846 |
| Cow position: | chr7:8277898-8278369 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 304 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 383-839 |
| Cow position: | chr7:3180340-3180799 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 383-884 |
| Cow position: | chr7:3180256-3180760 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 387-868 |
| Cow position: | chr7:8324792-8325276 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 388-888 |
| Cow position: | chr7:3179757-3180260 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 150 |
| Conread position: | 393-868 |
| Cow position: | chr7:8325050-8325528 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 395-772 |
| Cow position: | chr7:1015090-1015468 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 395-866 |
| Cow position: | chr7:11601036-11600562 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 395-887 |
| Cow position: | chr7:18390229-18390724 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 397-884 |
| Cow position: | chr7:18390147-18390637 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 397-889 |
| Cow position: | chr7:11601118-11600623 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 399 |
| Conread position: | 400-844 |
| Cow position: | chr7:11434981-11434549 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 403-870 |
| Cow position: | chr7:8324725-8325194 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 404-763 |
| Cow position: | chr7:8278176-8278536 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 62 |
| Conread position: | 404-867 |
| Cow position: | chr7:18390322-18390788 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 305 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 404-872 |
| Cow position: | chr7:8278008-8278477 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 309 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 408-866 |
| Cow position: | chr7:8325317-8325778 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 409-884 |
| Cow position: | chr7:1439722-1440197 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 414-889 |
| Cow position: | chr7:1439472-1439951 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 307 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 445-823 |
| Cow position: | chr7:11600818-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 448-888 |
| Cow position: | chr7:42879324-42878881 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 326 |
| Conread position: | 454-802 |
| Cow position: | chr7:1438375-1438726 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 328 |
| Conread position: | 461-868 |
| Cow position: | chr7:11600884-11600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 472-867 |
| Cow position: | chr7:1439449-1439846 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 234, 138 |
| Conread position: | 474-888 |
| Cow position: | chr7:42879211-42878797 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 479-868 |
| Cow position: | chr7:8277749-8278139 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 479-1180 |
| Cow position: | chr7:8243707-8244415 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 439 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 7, 294 |
| Conread position: | 480-860 |
| Cow position: | chr7:8243206-8243585 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 238, 174 |
| Conread position: | 480-873 |
| Cow position: | chr7:8325560-8325953 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 480-882 |
| Cow position: | chr7:1439878-1440279 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 480-1156 |
| Cow position: | chr7:8243793-8244474 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 420 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 246, 202 |
| Conread position: | 481-846 |
| Cow position: | chr7:1438321-1438686 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 481-865 |
| Cow position: | chr7:8325897-8326276 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 240, 234 |
| Conread position: | 481-871 |
| Cow position: | chr7:8325645-8326035 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 156, 142 |
| Conread position: | 482-866 |
| Cow position: | chr7:8325310-8325694 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 485-846 |
| Cow position: | chr7:8243295-8243655 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 86 |
| Conread position: | 485-870 |
| Cow position: | chr7:8243462-8243847 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 485-889 |
| Cow position: | chr7:1014931-1015335 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-868 |
| Cow position: | chr7:8243044-8243425 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 225, 208 |
| Conread position: | 487-868 |
| Cow position: | chr7:8242961-8243342 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 487-929 |
| Cow position: | chr7:8277338-8277776 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 488-860 |
| Cow position: | chr7:8277255-8277627 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 490-888 |
| Cow position: | chr7:1014684-1015082 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 491-825 |
| Cow position: | chr7:8325823-8326160 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 491-868 |
| Cow position: | chr7:8277426-8277803 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 491-872 |
| Cow position: | chr7:11434650-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 491-887 |
| Cow position: | chr7:18390076-18390472 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 491-889 |
| Cow position: | chr7:11601189-11600791 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 379 |
| Conread position: | 492-868 |
| Cow position: | chr7:1014272-1014648 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-921 |
| Cow position: | chr7:1014104-1014529 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 142 |
| Conread position: | 492-1180 |
| Cow position: | chr7:8243637-8244329 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 421 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 304, 315 |
| Conread position: | 493-740 |
| Cow position: | chr7:11434487-11434240 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 493-867 |
| Cow position: | chr7:8277680-8278054 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 501-866 |
| Cow position: | chr7:8243394-8243759 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 501-870 |
| Cow position: | chr7:8242807-8243176 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 502-868 |
| Cow position: | chr7:8243144-8243509 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 502-868 |
| Cow position: | chr7:8325246-8325612 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 502-868 |
| Cow position: | chr7:8325750-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 502-870 |
| Cow position: | chr7:8277521-8277889 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 508-891 |
| Cow position: | chr7:3179712-3180095 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 509-884 |
| Cow position: | chr7:18390010-18390385 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 513-888 |
| Cow position: | chr7:42879424-42879049 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 555-866 |
| Cow position: | chr7:1014251-1014562 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-846 |
| Cow position: | chr7:11601203-11600918 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-888 |
| Cow position: | chr7:1014671-1014998 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 220 |
| Conread position: | 562-884 |
| Cow position: | chr7:11601285-11600964 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 569-889 |
| Cow position: | chr7:42879452-42879132 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 569-930 |
| Cow position: | chr7:18389986-18390343 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 228, 221 |
| Conread position: | 582-870 |
| Cow position: | chr7:8242804-8243092 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 592-1196 |
| Cow position: | chr7:3179712-3180340 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 179 |
| Conread position: | 639-876 |
| Cow position: | chr7:1439448-1439683 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 131 |
| Conread position: | 657-869 |
| Cow position: | chr7:8277256-8277468 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 148 |
| Conread position: | 669-889 |
| Cow position: | chr7:3179705-3179925 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-1156 |
| Cow position: | chr7:11434974-11434549 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 886-1180 |
| Cow position: | chr7:8324814-8325108 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 150, 136 |
| Conread position: | 888-1180 |
| Cow position: | chr7:8277679-8277971 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1200 |
| Cow position: | chr7:3180284-3180596 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1178 |
| Cow position: | chr7:1014273-1014562 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 889-1178 |
| Cow position: | chr7:8324901-8325190 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 889-1178 |
| Cow position: | chr7:8325405-8325694 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 889-1179 |
| Cow position: | chr7:3180117-3180407 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1179 |
| Cow position: | chr7:8325153-8325443 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 132 |
| Conread position: | 889-1179 |
| Cow position: | chr7:18390498-18390788 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1180 |
| Cow position: | chr7:3180201-3180492 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1180 |
| Cow position: | chr7:8243219-8243509 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 889-1180 |
| Cow position: | chr7:8324985-8325276 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1180 |
| Cow position: | chr7:8325069-8325360 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 139 |
| Conread position: | 889-1180 |
| Cow position: | chr7:8325657-8325948 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 129, 146 |
| Conread position: | 889-1180 |
| Cow position: | chr7:8325825-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 889-1181 |
| Cow position: | chr7:11600767-11600475 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 124, 113 |
| Conread position: | 889-1182 |
| Cow position: | chr7:8243638-8243931 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1185 |
| Cow position: | chr7:8243470-8243766 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 136, 124 |
| Conread position: | 889-1185 |
| Cow position: | chr7:8243554-8243850 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1185 |
| Cow position: | chr7:8277764-8278060 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 889-1185 |
| Cow position: | chr7:8278016-8278312 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 889-1190 |
| Cow position: | chr7:18390162-18390463 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 277, 270 |
| Conread position: | 889-1192 |
| Cow position: | chr7:1015191-1015496 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 125, 130 |
| Conread position: | 889-1194 |
| Cow position: | chr7:11600851-11600546 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:1014855-1015162 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:1015107-1015414 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:1439891-1440197 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 78 |
| Conread position: | 889-1196 |
| Cow position: | chr7:3180369-3180676 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:3180453-3180760 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:11600935-11600628 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:11601019-11600712 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:11601103-11600796 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 211, 223 |
| Conread position: | 889-1196 |
| Cow position: | chr7:18390078-18390385 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 889-1196 |
| Cow position: | chr7:18390330-18390637 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1196 |
| Cow position: | chr7:18390414-18390721 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1197 |
| Cow position: | chr7:18390246-18390554 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1201 |
| Cow position: | chr7:1439974-1440286 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 889-1205 |
| Cow position: | chr7:3180537-3180849 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 889-1207 |
| Cow position: | chr7:1014771-1015089 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 209, 221 |
| Conread position: | 889-1207 |
| Cow position: | chr7:1015023-1015341 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 889-1207 |
| Cow position: | chr7:3179949-3180267 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 209, 218 |
| Conread position: | 889-1207 |
| Cow position: | chr7:42878688-42878370 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 889-1207 |
| Cow position: | chr7:42878856-42878538 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 223, 212 |
| Conread position: | 889-1207 |
| Cow position: | chr7:42878940-42878622 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 219, 211 |
| Conread position: | 889-1207 |
| Cow position: | chr7:42879276-42878958 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 890-1180 |
| Cow position: | chr7:8277597-8277887 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 890-1197 |
| Cow position: | chr7:18389995-18390302 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 891-1157 |
| Cow position: | chr7:11601185-11600919 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 891-1180 |
| Cow position: | chr7:8324735-8325024 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 892-1218 |
| Cow position: | chr7:42879189-42878863 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 894-1180 |
| Cow position: | chr7:8277853-8278139 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 894-1183 |
| Cow position: | chr7:8325746-8326035 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 143, 124 |
| Conread position: | 897-1196 |
| Cow position: | chr7:3179705-3180004 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 898-1196 |
| Cow position: | chr7:11601261-11600964 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 215, 36 |
| Conread position: | 941-1191 |
| Cow position: | chr7:1014655-1014905 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 952-1185 |
| Cow position: | chr7:11434508-11434275 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 972-1196 |
| Cow position: | chr7:1014272-1014496 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1002-1207 |
| Cow position: | chr7:3179726-3179931 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.