Cow genome map

Conread name: Ss1.1-rste17_k4.5

Conread position: 233-884
Cow position:
Alignm length: 660
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 233-887
Cow position:
Alignm length: 662
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 233-1191
Cow position:
Alignm length: 995
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 127

Conread position: 241-874
Cow position:
Alignm length: 643
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 119

Conread position: 241-891
Cow position:
Alignm length: 661
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 249-887
Cow position:
Alignm length: 650
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 340-887
Cow position:
Alignm length: 557
Alignm identity: 352
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 96

Conread position: 361-886
Cow position:
Alignm length: 536
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 378-846
Cow position:
Alignm length: 476
Alignm identity: 304
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 88

Conread position: 383-839
Cow position:
Alignm length: 460
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 383-884
Cow position:
Alignm length: 508
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 387-868
Cow position:
Alignm length: 489
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 48

Conread position: 388-888
Cow position:
Alignm length: 505
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 150

Conread position: 393-868
Cow position:
Alignm length: 483
Alignm identity: 299
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 40

Conread position: 395-772
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 151

Conread position: 395-866
Cow position:
Alignm length: 477
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 395-887
Cow position:
Alignm length: 497
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 397-884
Cow position:
Alignm length: 493
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 397-889
Cow position:
Alignm length: 497
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 399

Conread position: 400-844
Cow position:
Alignm length: 451
Alignm identity: 283
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 8

Conread position: 403-870
Cow position:
Alignm length: 479
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 5

Conread position: 404-763
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 62

Conread position: 404-867
Cow position:
Alignm length: 472
Alignm identity: 305
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 29

Conread position: 404-872
Cow position:
Alignm length: 478
Alignm identity: 309
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 31

Conread position: 408-866
Cow position:
Alignm length: 467
Alignm identity: 294
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 26

Conread position: 409-884
Cow position:
Alignm length: 480
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 26

Conread position: 414-889
Cow position:
Alignm length: 484
Alignm identity: 307
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 43, 126

Conread position: 445-823
Cow position:
Alignm length: 382
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 448-888
Cow position:
Alignm length: 445
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 326

Conread position: 454-802
Cow position:
Alignm length: 353
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 328

Conread position: 461-868
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 472-867
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 234, 138

Conread position: 474-888
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 479-868
Cow position:
Alignm length: 395
Alignm identity: 250
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 7, 146

Conread position: 479-1180
Cow position:
Alignm length: 720
Alignm identity: 439
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 294

Conread position: 480-860
Cow position:
Alignm length: 383
Alignm identity: 238
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 238, 174

Conread position: 480-873
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 72, 61

Conread position: 480-882
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 10

Conread position: 480-1156
Cow position:
Alignm length: 694
Alignm identity: 420
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 246, 202

Conread position: 481-846
Cow position:
Alignm length: 369
Alignm identity: 224
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 138

Conread position: 481-865
Cow position:
Alignm length: 391
Alignm identity: 249
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 240, 234

Conread position: 481-871
Cow position:
Alignm length: 395
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 142

Conread position: 482-866
Cow position:
Alignm length: 390
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 73

Conread position: 485-846
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 156, 86

Conread position: 485-870
Cow position:
Alignm length: 386
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 485-889
Cow position:
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 486-868
Cow position:
Alignm length: 386
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 225, 208

Conread position: 487-868
Cow position:
Alignm length: 386
Alignm identity: 244
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 60

Conread position: 487-929
Cow position:
Alignm length: 448
Alignm identity: 283
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 41

Conread position: 488-860
Cow position:
Alignm length: 376
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 52

Conread position: 490-888
Cow position:
Alignm length: 402
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 491-825
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 56

Conread position: 491-868
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 52

Conread position: 491-872
Cow position:
Alignm length: 386
Alignm identity: 247
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 50

Conread position: 491-887
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 66, 49

Conread position: 491-889
Cow position:
Alignm length: 400
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 379

Conread position: 492-868
Cow position:
Alignm length: 377
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 492-921
Cow position:
Alignm length: 434
Alignm identity: 268
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 142

Conread position: 492-1180
Cow position:
Alignm length: 703
Alignm identity: 421
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 304, 315

Conread position: 493-740
Cow position:
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 52

Conread position: 493-867
Cow position:
Alignm length: 380
Alignm identity: 247
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 48

Conread position: 501-866
Cow position:
Alignm length: 369
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 42

Conread position: 501-870
Cow position:
Alignm length: 372
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 40

Conread position: 502-868
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 55

Conread position: 502-868
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 502-868
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 502-870
Cow position:
Alignm length: 374
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 31

Conread position: 508-891
Cow position:
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 509-884
Cow position:
Alignm length: 379
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 38

Conread position: 513-888
Cow position:
Alignm length: 383
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 25

Conread position: 555-866
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 561-846
Cow position:
Alignm length: 286
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 561-888
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 220

Conread position: 562-884
Cow position:
Alignm length: 323
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 569-889
Cow position:
Alignm length: 322
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 9

Conread position: 569-930
Cow position:
Alignm length: 363
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 228, 221

Conread position: 582-870
Cow position:
Alignm length: 292
Alignm identity: 184
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 43

Conread position: 592-1196
Cow position:
Alignm length: 630
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 179

Conread position: 639-876
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 131

Conread position: 657-869
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 148

Conread position: 669-889
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 741-1156
Cow position:
Alignm length: 432
Alignm identity: 268
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 47

Conread position: 886-1180
Cow position:
Alignm length: 296
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 150, 136

Conread position: 888-1180
Cow position:
Alignm length: 293
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 888-1200
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1178
Cow position:
Alignm length: 291
Alignm identity: 192
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 39, 49

Conread position: 889-1178
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 44

Conread position: 889-1178
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 45

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1179
Cow position:
Alignm length: 293
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 148, 132

Conread position: 889-1179
Cow position:
Alignm length: 291
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1180
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1180
Cow position:
Alignm length: 295
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 140, 129

Conread position: 889-1180
Cow position:
Alignm length: 292
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1180
Cow position:
Alignm length: 293
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 139

Conread position: 889-1180
Cow position:
Alignm length: 295
Alignm identity: 185
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 129, 146

Conread position: 889-1180
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 58

Conread position: 889-1181
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 124, 113

Conread position: 889-1182
Cow position:
Alignm length: 294
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1185
Cow position:
Alignm length: 299
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 136, 124

Conread position: 889-1185
Cow position:
Alignm length: 297
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1185
Cow position:
Alignm length: 300
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 58

Conread position: 889-1185
Cow position:
Alignm length: 299
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 49

Conread position: 889-1190
Cow position:
Alignm length: 303
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 277, 270

Conread position: 889-1192
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 125, 130

Conread position: 889-1194
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 310
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 78

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 211, 223

Conread position: 889-1196
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 56

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1196
Cow position:
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1197
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1201
Cow position:
Alignm length: 314
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 36

Conread position: 889-1205
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 253, 0

Conread position: 889-1207
Cow position:
Alignm length: 320
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 209, 221

Conread position: 889-1207
Cow position:
Alignm length: 319
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 889-1207
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 209, 218

Conread position: 889-1207
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 134

Conread position: 889-1207
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 223, 212

Conread position: 889-1207
Cow position:
Alignm length: 320
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 219, 211

Conread position: 889-1207
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 40

Conread position: 890-1180
Cow position:
Alignm length: 294
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 45

Conread position: 890-1197
Cow position:
Alignm length: 313
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 106

Conread position: 891-1157
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 891-1180
Cow position:
Alignm length: 291
Alignm identity: 191
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 45

Conread position: 892-1218
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 49

Conread position: 894-1180
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 49

Conread position: 894-1183
Cow position:
Alignm length: 293
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 124

Conread position: 897-1196
Cow position:
Alignm length: 300
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 898-1196
Cow position:
Alignm length: 300
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 215, 36

Conread position: 941-1191
Cow position:
Alignm length: 251
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 952-1185
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 75

Conread position: 972-1196
Cow position:
Alignm length: 225
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1002-1207
Cow position:
Alignm length: 206
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.