Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rste21_g17.5
        

               Conread position:
               96-266
               

               Cow position:
               chr1:71715901-71716079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               98-488
               

               Cow position:
               chr1:42874216-42873828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 185
               

               Conread position:
               99-501
               

               Cow position:
               chr1:4290890-4291298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               100-347
               

               Cow position:
               chr1:82504700-82504961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               111, 42
               

               Conread position:
               100-468
               

               Cow position:
               chr1:7143116-7142751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               112, 185
               

               Conread position:
               103-575
               

               Cow position:
               chr1:19482338-19481891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 176
               

               Conread position:
               104-287
               

               Cow position:
               chr1:40292225-40292047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               104-302
               

               Cow position:
               chr1:74013530-74013322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               105-568
               

               Cow position:
               chr1:16767347-16766884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               106-276
               

               Cow position:
               chr1:24561712-24561538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 36
               

               Conread position:
               106-439
               

               Cow position:
               chr1:53595064-53595391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               110, 122
               

               Conread position:
               106-561
               

               Cow position:
               chr1:46693917-46693456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               106-571
               

               Cow position:
               chr1:24133316-24132858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               106-574
               

               Cow position:
               chr1:79165353-79164874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 239
               

               Conread position:
               106-584
               

               Cow position:
               chr1:47658094-47658565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 36
               

               Conread position:
               107-337
               

               Cow position:
               chr1:6795196-6794953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               107-348
               

               Cow position:
               chr1:64099523-64099282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               107-498
               

               Cow position:
               chr1:48731088-48730700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               108-439
               

               Cow position:
               chr1:81673805-81674139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               84, 202
               

               Conread position:
               108-492
               

               Cow position:
               chr1:37887049-37886689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               108-571
               

               Cow position:
               chr1:71119251-71119726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               108-575
               

               Cow position:
               chr1:43505264-43505733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 95
               

               Conread position:
               109-221
               

               Cow position:
               chr1:42175305-42175417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-257
               

               Cow position:
               chr1:55020231-55020371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               109-257
               

               Cow position:
               chr1:61304423-61304573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               109-268
               

               Cow position:
               chr1:100132610-100132773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               109-269
               

               Cow position:
               chr1:23778682-23778840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               109-319
               

               Cow position:
               chr1:36613533-36613321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               109-319
               

               Cow position:
               chr1:38479561-38479778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               109-321
               

               Cow position:
               chr1:58889553-58889339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               109-329
               

               Cow position:
               chr1:42053583-42053369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               109-337
               

               Cow position:
               chr1:85783268-85783496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 33
               

               Conread position:
               109-338
               

               Cow position:
               chr1:67014126-67014361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               109-345
               

               Cow position:
               chr1:9870114-9869867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               109-345
               

               Cow position:
               chr1:44517412-44517654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               109-348
               

               Cow position:
               chr1:52206434-52206660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               109-348
               

               Cow position:
               chr1:55202872-55202640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               109-348
               

               Cow position:
               chr1:57119600-57119364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               109-348
               

               Cow position:
               chr1:61149791-61149561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 131
               

               Conread position:
               109-349
               

               Cow position:
               chr1:31871162-31871409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               109-352
               

               Cow position:
               chr1:23099639-23099886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               22, 154
               

               Conread position:
               109-353
               

               Cow position:
               chr1:57525074-57524832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               109-360
               

               Cow position:
               chr1:39100797-39101052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               78, 223
               

               Conread position:
               109-364
               

               Cow position:
               chr1:25178002-25177741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 222
               

               Conread position:
               109-373
               

               Cow position:
               chr1:46885836-46886097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 174
               

               Conread position:
               109-374
               

               Cow position:
               chr1:11873613-11873355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               109-384
               

               Cow position:
               chr1:12596159-12595885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 64
               

               Conread position:
               109-429
               

               Cow position:
               chr1:60907103-60907439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 256
               

               Conread position:
               109-438
               

               Cow position:
               chr1:7657572-7657242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               109-448
               

               Cow position:
               chr1:4374596-4374256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 33
               

               Conread position:
               109-448
               

               Cow position:
               chr1:22777809-22777463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               69, 264
               

               Conread position:
               109-448
               

               Cow position:
               chr1:90423344-90423002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               103, 172
               

               Conread position:
               109-448
               

               Cow position:
               chr1:92437249-92436909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 174
               

               Conread position:
               109-453
               

               Cow position:
               chr1:64251307-64250966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 36
               

               Conread position:
               109-453
               

               Cow position:
               chr1:71257741-71257380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               109-457
               

               Cow position:
               chr1:64818148-64817792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 241
               

               Conread position:
               109-460
               

               Cow position:
               chr1:60707145-60707496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               102, 180
               

               Conread position:
               109-486
               

               Cow position:
               chr1:39510300-39509939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               109-504
               

               Cow position:
               chr1:4032376-4032769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               109-504
               

               Cow position:
               chr1:39418376-39417980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               109-513
               

               Cow position:
               chr1:80336508-80336104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 171
               

               Conread position:
               109-561
               

               Cow position:
               chr1:26930231-26929799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               109-570
               

               Cow position:
               chr1:97954706-97954279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               109-571
               

               Cow position:
               chr1:56225219-56225671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 27
               

               Conread position:
               109-571
               

               Cow position:
               chr1:77620292-77620754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 82
               

               Conread position:
               109-571
               

               Cow position:
               chr1:82861515-82862013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               109-574
               

               Cow position:
               chr1:15547211-15547673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               109-575
               

               Cow position:
               chr1:48444440-48443982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 33
               

               Conread position:
               109-581
               

               Cow position:
               chr1:53374177-53374641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 106
               

               Conread position:
               109-585
               

               Cow position:
               chr1:42256768-42256288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 228
               

               Conread position:
               109-585
               

               Cow position:
               chr1:81290260-81290725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 95
               

               Conread position:
               110-257
               

               Cow position:
               chr1:9437806-9437657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               110-319
               

               Cow position:
               chr1:61246408-61246205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               107, 32
               

               Conread position:
               110-323
               

               Cow position:
               chr1:60491949-60492164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               97, 131
               

               Conread position:
               110-383
               

               Cow position:
               chr1:3244595-3244865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               110-383
               

               Cow position:
               chr1:4589738-4589461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               111-297
               

               Cow position:
               chr1:67916780-67916969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               111-465
               

               Cow position:
               chr1:7350282-7350646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr1:53207950-53207803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               112-301
               

               Cow position:
               chr1:732180-731998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               112-344
               

               Cow position:
               chr1:20521937-20521710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               169, 32
               

               Conread position:
               112-352
               

               Cow position:
               chr1:81859482-81859231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               112-356
               

               Cow position:
               chr1:49131377-49131126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               100, 244
               

               Conread position:
               112-422
               

               Cow position:
               chr1:61350892-61351200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               103, 180
               

               Conread position:
               112-448
               

               Cow position:
               chr1:41735880-41735539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               107, 154
               

               Conread position:
               112-492
               

               Cow position:
               chr1:95215442-95215064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 228
               

               Conread position:
               112-498
               

               Cow position:
               chr1:42360011-42360417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 134
               

               Conread position:
               112-504
               

               Cow position:
               chr1:21835693-21836066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 94
               

               Conread position:
               112-552
               

               Cow position:
               chr1:1053333-1053768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               104, 120
               

               Conread position:
               112-566
               

               Cow position:
               chr1:34685940-34686365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               112-569
               

               Cow position:
               chr1:93110880-93110429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               112-571
               

               Cow position:
               chr1:11772336-11771878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 203
               

               Conread position:
               112-574
               

               Cow position:
               chr1:54199635-54199187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               112-582
               

               Cow position:
               chr1:100324981-100324538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               273, 87
               

               Conread position:
               112-584
               

               Cow position:
               chr1:93499367-93499838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 184
               

               Conread position:
               112-588
               

               Cow position:
               chr1:68818051-68817582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               113-221
               

               Cow position:
               chr1:36920887-36920779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-230
               

               Cow position:
               chr1:72104892-72105009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-252
               

               Cow position:
               chr1:63311309-63311446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               113-253
               

               Cow position:
               chr1:88029031-88029173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               113-256
               

               Cow position:
               chr1:80183993-80183846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               113-257
               

               Cow position:
               chr1:46821758-46821902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-257
               

               Cow position:
               chr1:50765103-50765251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               113-266
               

               Cow position:
               chr1:81579509-81579667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               113-268
               

               Cow position:
               chr1:96559088-96559246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               113-273
               

               Cow position:
               chr1:3076645-3076489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               113-273
               

               Cow position:
               chr1:3872597-3872759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               113-276
               

               Cow position:
               chr1:24571143-24570976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 29
               

               Conread position:
               113-278
               

               Cow position:
               chr1:51983339-51983497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               113-288
               

               Cow position:
               chr1:73442874-73442693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               113-299
               

               Cow position:
               chr1:23905741-23905932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 174
               

               Conread position:
               113-301
               

               Cow position:
               chr1:3757698-3757892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               113-301
               

               Cow position:
               chr1:43893674-43893861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               113-302
               

               Cow position:
               chr1:24201993-24201810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               142, 85
               

               Conread position:
               113-307
               

               Cow position:
               chr1:69445118-69445306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               113-307
               

               Cow position:
               chr1:84786517-84786717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-309
               

               Cow position:
               chr1:55686473-55686273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               113-312
               

               Cow position:
               chr1:64160087-64160287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               113-314
               

               Cow position:
               chr1:23969291-23969088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               113-318
               

               Cow position:
               chr1:24528852-24528655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               113-319
               

               Cow position:
               chr1:4026931-4027146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               113-319
               

               Cow position:
               chr1:37414063-37413856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               113-319
               

               Cow position:
               chr1:66491583-66491796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               113-319
               

               Cow position:
               chr1:79002208-79002000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               142, 73
               

               Conread position:
               113-321
               

               Cow position:
               chr1:13056782-13056572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               113-321
               

               Cow position:
               chr1:90235206-90234997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               113-322
               

               Cow position:
               chr1:21092837-21093049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               113-323
               

               Cow position:
               chr1:68282540-68282760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               113-330
               

               Cow position:
               chr1:97806538-97806753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               103, 64
               

               Conread position:
               113-334
               

               Cow position:
               chr1:88970809-88971026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               113-336
               

               Cow position:
               chr1:20125356-20125585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               113-336
               

               Cow position:
               chr1:101547296-101547062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               113-338
               

               Cow position:
               chr1:31646960-31647183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               143, 111
               

               Conread position:
               113-340
               

               Cow position:
               chr1:19998289-19998066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               113-344
               

               Cow position:
               chr1:31378178-31377959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               113-344
               

               Cow position:
               chr1:97620094-97619856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               113-346
               

               Cow position:
               chr1:43285463-43285224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               113-347
               

               Cow position:
               chr1:30034292-30034518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               141, 47
               

               Conread position:
               113-347
               

               Cow position:
               chr1:43878566-43878324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 212
               

               Conread position:
               113-347
               

               Cow position:
               chr1:56719059-56719287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 64
               

               Conread position:
               113-347
               

               Cow position:
               chr1:79663920-79663688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 154
               

               Conread position:
               113-348
               

               Cow position:
               chr1:57698710-57698463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 176
               

               Conread position:
               113-348
               

               Cow position:
               chr1:61725367-61725132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               113-349
               

               Cow position:
               chr1:71797154-71796930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               113-350
               

               Cow position:
               chr1:5873225-5872983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-351
               

               Cow position:
               chr1:55260684-55260445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               113-352
               

               Cow position:
               chr1:15307780-15308022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 154
               

               Conread position:
               113-353
               

               Cow position:
               chr1:30413331-30413580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 245
               

               Conread position:
               113-353
               

               Cow position:
               chr1:62711183-62710936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 221
               

               Conread position:
               113-353
               

               Cow position:
               chr1:97422551-97422310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               113-355
               

               Cow position:
               chr1:95604757-95605003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               106, 219
               

               Conread position:
               113-356
               

               Cow position:
               chr1:21572789-21573046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               106, 215
               

               Conread position:
               113-360
               

               Cow position:
               chr1:86696658-86696405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 219
               

               Conread position:
               113-362
               

               Cow position:
               chr1:58066960-58066705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               74, 173
               

               Conread position:
               113-364
               

               Cow position:
               chr1:34000651-34000907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               100, 233
               

               Conread position:
               113-366
               

               Cow position:
               chr1:95809785-95810043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 219
               

               Conread position:
               113-373
               

               Cow position:
               chr1:666106-666371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 236
               

               Conread position:
               113-373
               

               Cow position:
               chr1:67616282-67616532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               113-374
               

               Cow position:
               chr1:22448838-22448575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-377
               

               Cow position:
               chr1:31548584-31548854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 42
               

               Conread position:
               113-380
               

               Cow position:
               chr1:47008773-47009045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               25, 218
               

               Conread position:
               113-383
               

               Cow position:
               chr1:1801890-1802156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               113-383
               

               Cow position:
               chr1:78783292-78783563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               102, 190
               

               Conread position:
               113-384
               

               Cow position:
               chr1:1403724-1403465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               113-384
               

               Cow position:
               chr1:33701866-33702135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               143, 199
               

               Conread position:
               113-384
               

               Cow position:
               chr1:71946624-71946354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 29
               

               Conread position:
               113-384
               

               Cow position:
               chr1:77099794-77099531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 103
               

               Conread position:
               113-387
               

               Cow position:
               chr1:40689464-40689730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               142, 105
               

               Conread position:
               113-392
               

               Cow position:
               chr1:52564046-52563785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               113-411
               

               Cow position:
               chr1:43380283-43379980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 171
               

               Conread position:
               113-412
               

               Cow position:
               chr1:22745373-22745672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               113-413
               

               Cow position:
               chr1:90640771-90641082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-419
               

               Cow position:
               chr1:44155008-44155302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 85
               

               Conread position:
               113-429
               

               Cow position:
               chr1:24235772-24235457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               113-429
               

               Cow position:
               chr1:57396183-57395874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               113-435
               

               Cow position:
               chr1:32630717-32631037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               113-436
               

               Cow position:
               chr1:83943604-83943271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 63
               

               Conread position:
               113-439
               

               Cow position:
               chr1:7713706-7714039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               104, 174
               

               Conread position:
               113-439
               

               Cow position:
               chr1:16839324-16839659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 219
               

               Conread position:
               113-439
               

               Cow position:
               chr1:45007212-45007538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               99, 174
               

               Conread position:
               113-439
               

               Cow position:
               chr1:50670822-50671153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               113-439
               

               Cow position:
               chr1:52754396-52754065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               114, 218
               

               Conread position:
               113-439
               

               Cow position:
               chr1:96487925-96488256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 218
               

               Conread position:
               113-443
               

               Cow position:
               chr1:61721620-61721305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               214, 86
               

               Conread position:
               113-448
               

               Cow position:
               chr1:10719740-10719399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 248
               

               Conread position:
               113-448
               

               Cow position:
               chr1:35844184-35843846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               112, 169
               

               Conread position:
               113-448
               

               Cow position:
               chr1:53495208-53495541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 218
               

               Conread position:
               113-451
               

               Cow position:
               chr1:31390838-31390504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               166, 23
               

               Conread position:
               113-451
               

               Cow position:
               chr1:42555016-42555350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               113-459
               

               Cow position:
               chr1:72286303-72285976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 29
               

               Conread position:
               113-459
               

               Cow position:
               chr1:90868690-90868349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               113-465
               

               Cow position:
               chr1:88652377-88652734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-471
               

               Cow position:
               chr1:70380400-70380039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 269
               

               Conread position:
               113-471
               

               Cow position:
               chr1:81355957-81355599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-478
               

               Cow position:
               chr1:10064231-10063870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 7
               

               Conread position:
               113-486
               

               Cow position:
               chr1:68253337-68253714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 207
               

               Conread position:
               113-486
               

               Cow position:
               chr1:89349723-89350084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 98
               

               Conread position:
               113-487
               

               Cow position:
               chr1:98360668-98360284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               26, 226
               

               Conread position:
               113-492
               

               Cow position:
               chr1:81913406-81913032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 164
               

               Conread position:
               113-492
               

               Cow position:
               chr1:84240646-84241005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 29
               

               Conread position:
               113-495
               

               Cow position:
               chr1:67821464-67821095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 128
               

               Conread position:
               113-496
               

               Cow position:
               chr1:4027607-4027990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 194
               

               Conread position:
               113-498
               

               Cow position:
               chr1:89742266-89741866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 226
               

               Conread position:
               113-498
               

               Cow position:
               chr1:98551463-98551848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               113-501
               

               Cow position:
               chr1:96947948-96947587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               113-502
               

               Cow position:
               chr1:8349565-8349191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 102
               

               Conread position:
               113-504
               

               Cow position:
               chr1:34300802-34300414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 126
               

               Conread position:
               113-526
               

               Cow position:
               chr1:52039383-52039793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               113-531
               

               Cow position:
               chr1:52488212-52487813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               103, 26
               

               Conread position:
               113-535
               

               Cow position:
               chr1:19516660-19516227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               32, 276
               

               Conread position:
               113-539
               

               Cow position:
               chr1:53458451-53458871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 104
               

               Conread position:
               113-547
               

               Cow position:
               chr1:90864554-90864110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 227
               

               Conread position:
               113-548
               

               Cow position:
               chr1:51628756-51628326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 175
               

               Conread position:
               113-548
               

               Cow position:
               chr1:61735693-61735266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               103, 200
               

               Conread position:
               113-551
               

               Cow position:
               chr1:71691560-71692008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               99, 174
               

               Conread position:
               113-551
               

               Cow position:
               chr1:99642624-99642184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 244
               

               Conread position:
               113-552
               

               Cow position:
               chr1:91817028-91816582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 173
               

               Conread position:
               113-557
               

               Cow position:
               chr1:82884639-82884185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-557
               

               Cow position:
               chr1:86113667-86113205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 81
               

               Conread position:
               113-559
               

               Cow position:
               chr1:42968570-42968124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               113-561
               

               Cow position:
               chr1:83982631-83982181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               48, 240
               

               Conread position:
               113-566
               

               Cow position:
               chr1:100400455-100400004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-569
               

               Cow position:
               chr1:33331327-33330899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               113-570
               

               Cow position:
               chr1:61742222-61741760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               113-570
               

               Cow position:
               chr1:62964025-62964472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 163
               

               Conread position:
               113-571
               

               Cow position:
               chr1:1877773-1878228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 185
               

               Conread position:
               113-571
               

               Cow position:
               chr1:6760271-6759839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               113-571
               

               Cow position:
               chr1:12222859-12222399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 223
               

               Conread position:
               113-571
               

               Cow position:
               chr1:31765649-31765165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-571
               

               Cow position:
               chr1:40599798-40600230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 29
               

               Conread position:
               113-571
               

               Cow position:
               chr1:52496522-52496973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 210
               

               Conread position:
               113-571
               

               Cow position:
               chr1:63596314-63595846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 141
               

               Conread position:
               113-571
               

               Cow position:
               chr1:66138063-66138527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               113-571
               

               Cow position:
               chr1:66898732-66898289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               148, 94
               

               Conread position:
               113-571
               

               Cow position:
               chr1:72012057-72011617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               113-571
               

               Cow position:
               chr1:72035183-72034723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               113-571
               

               Cow position:
               chr1:73584656-73584200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               113-571
               

               Cow position:
               chr1:76470405-76470862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               147, 85
               

               Conread position:
               113-571
               

               Cow position:
               chr1:79590846-79591309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 226
               

               Conread position:
               113-571
               

               Cow position:
               chr1:84282807-84283276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               313
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               43, 234
               

               Conread position:
               113-571
               

               Cow position:
               chr1:96365420-96365854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               113-571
               

               Cow position:
               chr1:97820431-97820889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 190
               

               Conread position:
               113-574
               

               Cow position:
               chr1:8368-8827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 194
               

               Conread position:
               113-574
               

               Cow position:
               chr1:29627169-29626703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 119
               

               Conread position:
               113-574
               

               Cow position:
               chr1:61392045-61391588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-574
               

               Cow position:
               chr1:71748261-71747826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 170
               

               Conread position:
               113-574
               

               Cow position:
               chr1:91066402-91065949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 35
               

               Conread position:
               113-575
               

               Cow position:
               chr1:48105688-48105216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 269
               

               Conread position:
               113-575
               

               Cow position:
               chr1:72304625-72304193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 169
               

               Conread position:
               113-576
               

               Cow position:
               chr1:29935635-29935182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               113-576
               

               Cow position:
               chr1:36997943-36998391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               313
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               113-576
               

               Cow position:
               chr1:52435016-52435484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 187
               

               Conread position:
               113-576
               

               Cow position:
               chr1:68217614-68217157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 171
               

               Conread position:
               113-576
               

               Cow position:
               chr1:72069081-72068619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 82
               

               Conread position:
               113-577
               

               Cow position:
               chr1:43352903-43352443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               113-579
               

               Cow position:
               chr1:41056430-41056891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               113-580
               

               Cow position:
               chr1:68827159-68826710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               113-581
               

               Cow position:
               chr1:102266523-102266056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               113-584
               

               Cow position:
               chr1:22628893-22628439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               318
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               113-584
               

               Cow position:
               chr1:23488767-23488285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               107, 253
               

               Conread position:
               113-584
               

               Cow position:
               chr1:33719860-33720322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-584
               

               Cow position:
               chr1:64678443-64678895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 174
               

               Conread position:
               113-584
               

               Cow position:
               chr1:79844215-79844696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 29
               

               Conread position:
               113-585
               

               Cow position:
               chr1:54207070-54206598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               113-585
               

               Cow position:
               chr1:61005820-61005338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 222
               

               Conread position:
               113-585
               

               Cow position:
               chr1:73960446-73960906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 229
               

               Conread position:
               113-586
               

               Cow position:
               chr1:11226499-11226008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               113-586
               

               Cow position:
               chr1:54258313-54258789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 99
               

               Conread position:
               113-586
               

               Cow position:
               chr1:71295562-71295083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 42
               

               Conread position:
               114-355
               

               Cow position:
               chr1:71558181-71557940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               114-471
               

               Cow position:
               chr1:81563480-81563849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               115-346
               

               Cow position:
               chr1:17032588-17032352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               108, 216
               

               Conread position:
               115-383
               

               Cow position:
               chr1:57900993-57900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 173
               

               Conread position:
               115-504
               

               Cow position:
               chr1:11914129-11913742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 27
               

               Conread position:
               115-571
               

               Cow position:
               chr1:37707221-37706764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 171
               

               Conread position:
               115-571
               

               Cow position:
               chr1:63435055-63434593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               116-217
               

               Cow position:
               chr1:76938248-76938147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-229
               

               Cow position:
               chr1:37726626-37726513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-238
               

               Cow position:
               chr1:3739748-3739867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               116-239
               

               Cow position:
               chr1:29451623-29451750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               116-243
               

               Cow position:
               chr1:33081275-33081146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               116-248
               

               Cow position:
               chr1:98023646-98023511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               116-252
               

               Cow position:
               chr1:72813164-72813298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               116-257
               

               Cow position:
               chr1:96019021-96019156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               116-260
               

               Cow position:
               chr1:54294913-54294762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               116-261
               

               Cow position:
               chr1:88338446-88338595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               116-262
               

               Cow position:
               chr1:41138605-41138453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               116-274
               

               Cow position:
               chr1:6240365-6240519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 26
               

               Conread position:
               116-275
               

               Cow position:
               chr1:43822126-43822286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               116-288
               

               Cow position:
               chr1:57957109-57956934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 166
               

               Conread position:
               116-294
               

               Cow position:
               chr1:40062197-40062381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               116-295
               

               Cow position:
               chr1:35769192-35769379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               116-295
               

               Cow position:
               chr1:63049575-63049755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               116-307
               

               Cow position:
               chr1:81363743-81363926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               144, 24
               

               Conread position:
               116-310
               

               Cow position:
               chr1:99118134-99118334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               96, 184
               

               Conread position:
               116-314
               

               Cow position:
               chr1:43211527-43211714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               116-315
               

               Cow position:
               chr1:57247185-57247387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               116-322
               

               Cow position:
               chr1:91733630-91733843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               116-323
               

               Cow position:
               chr1:10728095-10728309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               116-323
               

               Cow position:
               chr1:33855276-33855484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 184
               

               Conread position:
               116-323
               

               Cow position:
               chr1:35597805-35597591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               116-323
               

               Cow position:
               chr1:70796344-70796134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               116-323
               

               Cow position:
               chr1:78921000-78920786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               116-330
               

               Cow position:
               chr1:56711869-56711654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               116-330
               

               Cow position:
               chr1:89395340-89395566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               116-330
               

               Cow position:
               chr1:95327404-95327186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 178
               

               Conread position:
               116-334
               

               Cow position:
               chr1:52506795-52506586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               145, 43
               

               Conread position:
               116-336
               

               Cow position:
               chr1:21131337-21131123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               116-337
               

               Cow position:
               chr1:80555430-80555222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               173, 26
               

               Conread position:
               116-338
               

               Cow position:
               chr1:31399477-31399250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               88, 149
               

               Conread position:
               116-340
               

               Cow position:
               chr1:31341305-31341074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               116-340
               

               Cow position:
               chr1:100770986-100770773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               129, 9
               

               Conread position:
               116-341
               

               Cow position:
               chr1:11770544-11770315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               116-341
               

               Cow position:
               chr1:97100562-97100341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               116-342
               

               Cow position:
               chr1:46940113-46939880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 169
               

               Conread position:
               116-342
               

               Cow position:
               chr1:57362318-57362093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 210
               

               Conread position:
               116-343
               

               Cow position:
               chr1:81180231-81179995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               100, 230
               

               Conread position:
               116-344
               

               Cow position:
               chr1:10116047-10115814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 175
               

               Conread position:
               116-344
               

               Cow position:
               chr1:69941219-69940986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               116-345
               

               Cow position:
               chr1:2169771-2169540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 186
               

               Conread position:
               116-345
               

               Cow position:
               chr1:56657790-56658013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 23
               

               Conread position:
               116-345
               

               Cow position:
               chr1:78689682-78689919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 210
               

               Conread position:
               116-345
               

               Cow position:
               chr1:99095112-99095344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               116-346
               

               Cow position:
               chr1:20422458-20422224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               116-346
               

               Cow position:
               chr1:23634151-23633929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               116-346
               

               Cow position:
               chr1:84116151-84116378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               143, 31
               

               Conread position:
               116-346
               

               Cow position:
               chr1:94526243-94526481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               116-347
               

               Cow position:
               chr1:3776865-3776633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               214, 154
               

               Conread position:
               116-347
               

               Cow position:
               chr1:50634657-50634419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               116-348
               

               Cow position:
               chr1:82370500-82370723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               116-349
               

               Cow position:
               chr1:29429612-29429849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               111, 215
               

               Conread position:
               116-351
               

               Cow position:
               chr1:13404378-13404137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 216
               

               Conread position:
               116-351
               

               Cow position:
               chr1:25183874-25184117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 151
               

               Conread position:
               116-351
               

               Cow position:
               chr1:29901208-29900985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               211, 74
               

               Conread position:
               116-352
               

               Cow position:
               chr1:40310755-40310992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               116-353
               

               Cow position:
               chr1:26811050-26810810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 214
               

               Conread position:
               116-353
               

               Cow position:
               chr1:31720236-31720477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 215
               

               Conread position:
               116-353
               

               Cow position:
               chr1:65943211-65942977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               139, 79
               

               Conread position:
               116-353
               

               Cow position:
               chr1:100537559-100537798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               99, 154
               

               Conread position:
               116-354
               

               Cow position:
               chr1:44164828-44165072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               116-354
               

               Cow position:
               chr1:78794986-78794751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               96, 29
               

               Conread position:
               116-355
               

               Cow position:
               chr1:13451798-13452040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 158
               

               Conread position:
               116-355
               

               Cow position:
               chr1:32092111-32092349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 211
               

               Conread position:
               116-355
               

               Cow position:
               chr1:36645442-36645200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 177
               

               Conread position:
               116-355
               

               Cow position:
               chr1:46354661-46354903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 215
               

               Conread position:
               116-355
               

               Cow position:
               chr1:57533903-57534146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               103, 217
               

               Conread position:
               116-355
               

               Cow position:
               chr1:85806787-85806543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               108, 238
               

               Conread position:
               116-356
               

               Cow position:
               chr1:32244650-32244411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 55
               

               Conread position:
               116-358
               

               Cow position:
               chr1:52170835-52170590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               96, 181
               

               Conread position:
               116-358
               

               Cow position:
               chr1:56748339-56748587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               116-358
               

               Cow position:
               chr1:88327233-88326995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               116-364
               

               Cow position:
               chr1:5506514-5506763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 216
               

               Conread position:
               116-364
               

               Cow position:
               chr1:101007865-101007624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               116-366
               

               Cow position:
               chr1:3456621-3456868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               100, 79
               

               Conread position:
               116-366
               

               Cow position:
               chr1:47543420-47543669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 212
               

               Conread position:
               116-367
               

               Cow position:
               chr1:90913833-90914090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               111, 215
               

               Conread position:
               116-373
               

               Cow position:
               chr1:76222942-76222683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 163
               

               Conread position:
               116-375
               

               Cow position:
               chr1:41004618-41004353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 43
               

               Conread position:
               116-380
               

               Cow position:
               chr1:57264237-57263980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               213, 26
               

               Conread position:
               116-380
               

               Cow position:
               chr1:75967185-75967443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 90
               

               Conread position:
               116-382
               

               Cow position:
               chr1:102826064-102825803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               116-384
               

               Cow position:
               chr1:3061845-3061568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               116-384
               

               Cow position:
               chr1:5162304-5162028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 256
               

               Conread position:
               116-384
               

               Cow position:
               chr1:55163671-55163935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               96, 157
               

               Conread position:
               116-387
               

               Cow position:
               chr1:80869855-80870134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               111, 244
               

               Conread position:
               116-410
               

               Cow position:
               chr1:45535451-45535750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               116-411
               

               Cow position:
               chr1:61724276-61723975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 95
               

               Conread position:
               116-414
               

               Cow position:
               chr1:98562909-98563209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               116-416
               

               Cow position:
               chr1:99136681-99136381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               116-417
               

               Cow position:
               chr1:57635216-57635511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               116-430
               

               Cow position:
               chr1:57639771-57639452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               110, 26
               

               Conread position:
               116-435
               

               Cow position:
               chr1:1916487-1916159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               29, 183
               

               Conread position:
               116-435
               

               Cow position:
               chr1:1991679-1991350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 177
               

               Conread position:
               116-435
               

               Cow position:
               chr1:99807973-99807648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 26
               

               Conread position:
               116-437
               

               Cow position:
               chr1:95035605-95035282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               116-438
               

               Cow position:
               chr1:22295689-22295363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 216
               

               Conread position:
               116-438
               

               Cow position:
               chr1:79333977-79333650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 215
               

               Conread position:
               116-438
               

               Cow position:
               chr1:101551206-101551534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 195
               

               Conread position:
               116-439
               

               Cow position:
               chr1:3930110-3929786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               99, 215
               

               Conread position:
               116-439
               

               Cow position:
               chr1:7685888-7685561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               116-439
               

               Cow position:
               chr1:11659392-11659719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 227
               

               Conread position:
               116-439
               

               Cow position:
               chr1:18196605-18196933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               116-439
               

               Cow position:
               chr1:26514602-26514278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               107, 211
               

               Conread position:
               116-439
               

               Cow position:
               chr1:30531025-30530699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               116-439
               

               Cow position:
               chr1:32562529-32562201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 216
               

               Conread position:
               116-439
               

               Cow position:
               chr1:47268879-47269203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 195
               

               Conread position:
               116-439
               

               Cow position:
               chr1:47544513-47544837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 211
               

               Conread position:
               116-439
               

               Cow position:
               chr1:52354666-52354338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 215
               

               Conread position:
               116-439
               

               Cow position:
               chr1:52372163-52372487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 225
               

               Conread position:
               116-439
               

               Cow position:
               chr1:53313155-53313488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 217
               

               Conread position:
               116-439
               

               Cow position:
               chr1:55780886-55781212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               111, 169
               

               Conread position:
               116-439
               

               Cow position:
               chr1:65530155-65529826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               111, 217
               

               Conread position:
               116-439
               

               Cow position:
               chr1:73062650-73062316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 221
               

               Conread position:
               116-439
               

               Cow position:
               chr1:76419865-76420193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 216
               

               Conread position:
               116-439
               

               Cow position:
               chr1:90604835-90604503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               111, 216
               

               Conread position:
               116-439
               

               Cow position:
               chr1:93858719-93859042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               116-439
               

               Cow position:
               chr1:98977687-98978019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 220
               

               Conread position:
               116-439
               

               Cow position:
               chr1:99837337-99837013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               116-439
               

               Cow position:
               chr1:100707944-100707621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               116-442
               

               Cow position:
               chr1:82378543-82378866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               116-442
               

               Cow position:
               chr1:102647520-102647198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 95
               

               Conread position:
               116-446
               

               Cow position:
               chr1:61494626-61494960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 211
               

               Conread position:
               116-447
               

               Cow position:
               chr1:95765340-95765013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               65, 151
               

               Conread position:
               116-448
               

               Cow position:
               chr1:51980976-51981303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               100, 149
               

               Conread position:
               116-448
               

               Cow position:
               chr1:74947368-74947037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               116-451
               

               Cow position:
               chr1:30372901-30373238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 212
               

               Conread position:
               116-451
               

               Cow position:
               chr1:31190355-31190027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               116-451
               

               Cow position:
               chr1:72141313-72141659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               116-454
               

               Cow position:
               chr1:92433769-92434087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               268, 17
               

               Conread position:
               116-459
               

               Cow position:
               chr1:5023991-5023670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               116-459
               

               Cow position:
               chr1:81868978-81868637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 196
               

               Conread position:
               116-459
               

               Cow position:
               chr1:85774208-85774549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               111, 183
               

               Conread position:
               116-465
               

               Cow position:
               chr1:83583191-83582835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               116-465
               

               Cow position:
               chr1:91800859-91800500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 196
               

               Conread position:
               116-474
               

               Cow position:
               chr1:3720677-3720337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               116-477
               

               Cow position:
               chr1:80973865-80973499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 260
               

               Conread position:
               116-478
               

               Cow position:
               chr1:38401558-38401910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               228, 28
               

               Conread position:
               116-478
               

               Cow position:
               chr1:66430050-66430402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               116-482
               

               Cow position:
               chr1:37309755-37309404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               116-482
               

               Cow position:
               chr1:93810192-93810544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               192, 19
               

               Conread position:
               116-486
               

               Cow position:
               chr1:39069202-39068837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 95
               

               Conread position:
               116-488
               

               Cow position:
               chr1:70534185-70533819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               97, 156
               

               Conread position:
               116-497
               

               Cow position:
               chr1:3790307-3789942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 99
               

               Conread position:
               116-497
               

               Cow position:
               chr1:56229003-56229367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               269, 108
               

               Conread position:
               116-498
               

               Cow position:
               chr1:33997163-33996793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               110, 124
               

               Conread position:
               116-498
               

               Cow position:
               chr1:47233726-47233349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 98
               

               Conread position:
               116-498
               

               Cow position:
               chr1:81613134-81613518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 213
               

               Conread position:
               116-498
               

               Cow position:
               chr1:85162798-85162416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               116-499
               

               Cow position:
               chr1:5135942-5135579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               116-501
               

               Cow position:
               chr1:100800106-100800483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               116-505
               

               Cow position:
               chr1:24534494-24534118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 95
               

               Conread position:
               116-508
               

               Cow position:
               chr1:57305581-57305959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               116-509
               

               Cow position:
               chr1:85361604-85361997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               100, 186
               

               Conread position:
               116-529
               

               Cow position:
               chr1:60032849-60032436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               116-545
               

               Cow position:
               chr1:57637121-57637539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               116-547
               

               Cow position:
               chr1:89937614-89937197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               23, 174
               

               Conread position:
               116-548
               

               Cow position:
               chr1:68276156-68276596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               116-551
               

               Cow position:
               chr1:92370610-92370183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               116-553
               

               Cow position:
               chr1:6958628-6959066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               116-557
               

               Cow position:
               chr1:6941215-6941657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               116-557
               

               Cow position:
               chr1:100741046-100741473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               217, 26
               

               Conread position:
               116-565
               

               Cow position:
               chr1:68845731-68845307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               116-568
               

               Cow position:
               chr1:70828663-70829098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               116-569
               

               Cow position:
               chr1:60986720-60987194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 99
               

               Conread position:
               116-569
               

               Cow position:
               chr1:100421592-100422023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               269, 79
               

               Conread position:
               116-570
               

               Cow position:
               chr1:32341458-32341010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               116-571
               

               Cow position:
               chr1:6103164-6102695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               116-571
               

               Cow position:
               chr1:35162153-35162610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               116-571
               

               Cow position:
               chr1:46839343-46839794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               293
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               100, 243
               

               Conread position:
               116-571
               

               Cow position:
               chr1:77462113-77462544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               116-571
               

               Cow position:
               chr1:94226799-94226339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 108
               

               Conread position:
               116-571
               

               Cow position:
               chr1:100551719-100552171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 234
               

               Conread position:
               116-571
               

               Cow position:
               chr1:101713865-101714321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               116-574
               

               Cow position:
               chr1:3924045-3923596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               116-574
               

               Cow position:
               chr1:10778323-10778762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 26
               

               Conread position:
               116-574
               

               Cow position:
               chr1:14379781-14379342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               382, 66
               

               Conread position:
               116-574
               

               Cow position:
               chr1:16855939-16855493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               116-574
               

               Cow position:
               chr1:21787075-21787532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 242
               

               Conread position:
               116-574
               

               Cow position:
               chr1:54478071-54478524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 232
               

               Conread position:
               116-574
               

               Cow position:
               chr1:101822747-101822296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               327
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               116-575
               

               Cow position:
               chr1:1956580-1956129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 168
               

               Conread position:
               116-575
               

               Cow position:
               chr1:6166000-6166441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               116-575
               

               Cow position:
               chr1:12871258-12870801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 116
               

               Conread position:
               116-575
               

               Cow position:
               chr1:14240057-14239595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               116-576
               

               Cow position:
               chr1:7442732-7443192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               116-576
               

               Cow position:
               chr1:22728796-22729263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 443
               

               Conread position:
               116-576
               

               Cow position:
               chr1:65103384-65103838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               116-577
               

               Cow position:
               chr1:197253-196796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               116-577
               

               Cow position:
               chr1:69539448-69539895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               116-577
               

               Cow position:
               chr1:74084440-74083977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 26
               

               Conread position:
               116-578
               

               Cow position:
               chr1:101634450-101634912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 195
               

               Conread position:
               116-579
               

               Cow position:
               chr1:1185488-1185931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               91, 168
               

               Conread position:
               116-579
               

               Cow position:
               chr1:61564540-61564995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 261
               

               Conread position:
               116-579
               

               Cow position:
               chr1:78810785-78811252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               116-579
               

               Cow position:
               chr1:101915918-101916385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               116-583
               

               Cow position:
               chr1:26896076-26895591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 155
               

               Conread position:
               116-584
               

               Cow position:
               chr1:27358692-27359161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               100, 222
               

               Conread position:
               116-584
               

               Cow position:
               chr1:45020054-45019589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               116-584
               

               Cow position:
               chr1:94211983-94212437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               116-585
               

               Cow position:
               chr1:61884664-61885131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 171
               

               Conread position:
               116-586
               

               Cow position:
               chr1:81569287-81568809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 216
               

               Conread position:
               116-587
               

               Cow position:
               chr1:96713065-96712592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 355
               

               Conread position:
               117-312
               

               Cow position:
               chr1:31899781-31899585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               117-347
               

               Cow position:
               chr1:33811684-33811911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 88
               

               Conread position:
               117-356
               

               Cow position:
               chr1:96078119-96078362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               103, 117
               

               Conread position:
               117-454
               

               Cow position:
               chr1:68951382-68951712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 13
               

               Conread position:
               117-459
               

               Cow position:
               chr1:19440268-19439931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               117-490
               

               Cow position:
               chr1:51968220-51968585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               117-493
               

               Cow position:
               chr1:41252653-41252286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               98, 145
               

               Conread position:
               117-556
               

               Cow position:
               chr1:100761841-100762264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 65
               

               Conread position:
               117-570
               

               Cow position:
               chr1:70538353-70538810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 375
               

               Conread position:
               117-571
               

               Cow position:
               chr1:34159582-34160033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               117-575
               

               Cow position:
               chr1:95176685-95177127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 184
               

               Conread position:
               117-577
               

               Cow position:
               chr1:78857572-78857115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               118-339
               

               Cow position:
               chr1:15311619-15311844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               106, 165
               

               Conread position:
               118-346
               

               Cow position:
               chr1:81472630-81472855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               147, 113
               

               Conread position:
               118-346
               

               Cow position:
               chr1:96184257-96184037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               118-347
               

               Cow position:
               chr1:5394119-5393887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               118-384
               

               Cow position:
               chr1:29671773-29671505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 170
               

               Conread position:
               118-439
               

               Cow position:
               chr1:64941552-64941223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 196
               

               Conread position:
               118-446
               

               Cow position:
               chr1:31414207-31413893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               118-454
               

               Cow position:
               chr1:89485342-89485667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               118-459
               

               Cow position:
               chr1:53424938-53425269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               137, 90
               

               Conread position:
               118-500
               

               Cow position:
               chr1:100705884-100706258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               118-571
               

               Cow position:
               chr1:85028712-85029141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               119-245
               

               Cow position:
               chr1:91370724-91370597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 84
               

               Conread position:
               119-256
               

               Cow position:
               chr1:29462606-29462743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               119-257
               

               Cow position:
               chr1:92048587-92048725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 98
               

               Conread position:
               119-266
               

               Cow position:
               chr1:7022211-7022358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               119-268
               

               Cow position:
               chr1:94378784-94378935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               119-272
               

               Cow position:
               chr1:58439294-58439143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               119-276
               

               Cow position:
               chr1:1348072-1347913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-276
               

               Cow position:
               chr1:54484820-54484980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               119-285
               

               Cow position:
               chr1:95071738-95071904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               119-289
               

               Cow position:
               chr1:73756845-73757012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 85
               

               Conread position:
               119-292
               

               Cow position:
               chr1:13455895-13456076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               119-295
               

               Cow position:
               chr1:13614967-13614783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               97, 60
               

               Conread position:
               119-301
               

               Cow position:
               chr1:57969289-57969114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               119-302
               

               Cow position:
               chr1:33716973-33717165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr1:4619117-4618913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               119-316
               

               Cow position:
               chr1:52510491-52510295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 144
               

               Conread position:
               119-319
               

               Cow position:
               chr1:44136710-44136512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               119-323
               

               Cow position:
               chr1:60114782-60114993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               119-323
               

               Cow position:
               chr1:101973196-101972985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               119-334
               

               Cow position:
               chr1:98708194-98708409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr1:66355956-66355744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               119-338
               

               Cow position:
               chr1:6447343-6447117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 69
               

               Conread position:
               119-338
               

               Cow position:
               chr1:68717231-68717005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 191
               

               Conread position:
               119-340
               

               Cow position:
               chr1:28567686-28567457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               119-341
               

               Cow position:
               chr1:30882563-30882356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               119-341
               

               Cow position:
               chr1:98612994-98613210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               119-342
               

               Cow position:
               chr1:98380825-98380594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               119-343
               

               Cow position:
               chr1:102469213-102468987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               119-344
               

               Cow position:
               chr1:14098546-14098769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               119-344
               

               Cow position:
               chr1:78030731-78030494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               119-344
               

               Cow position:
               chr1:91142402-91142176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               119-345
               

               Cow position:
               chr1:3752191-3751958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 179
               

               Conread position:
               119-345
               

               Cow position:
               chr1:15743830-15744063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               119-345
               

               Cow position:
               chr1:24655712-24655941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               119-349
               

               Cow position:
               chr1:49839258-49839490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 142
               

               Conread position:
               119-350
               

               Cow position:
               chr1:56073710-56073476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 164
               

               Conread position:
               119-352
               

               Cow position:
               chr1:61736855-61737082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               119-353
               

               Cow position:
               chr1:16272661-16272427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               119-353
               

               Cow position:
               chr1:56140382-56140144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 212
               

               Conread position:
               119-353
               

               Cow position:
               chr1:75443665-75443432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               96, 115
               

               Conread position:
               119-353
               

               Cow position:
               chr1:85776449-85776211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 212
               

               Conread position:
               119-355
               

               Cow position:
               chr1:73433119-73432879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               105, 231
               

               Conread position:
               119-356
               

               Cow position:
               chr1:11020787-11021019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               93, 136
               

               Conread position:
               119-360
               

               Cow position:
               chr1:65390574-65390820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 183
               

               Conread position:
               119-363
               

               Cow position:
               chr1:6200321-6200571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               93, 212
               

               Conread position:
               119-363
               

               Cow position:
               chr1:6881473-6881229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               119-364
               

               Cow position:
               chr1:92551383-92551136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 181
               

               Conread position:
               119-368
               

               Cow position:
               chr1:50679534-50679279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 236
               

               Conread position:
               119-373
               

               Cow position:
               chr1:8532461-8532208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               119-373
               

               Cow position:
               chr1:78195942-78196200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 219
               

               Conread position:
               119-373
               

               Cow position:
               chr1:99638028-99637775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               105, 190
               

               Conread position:
               119-383
               

               Cow position:
               chr1:3340689-3340953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               92, 168
               

               Conread position:
               119-389
               

               Cow position:
               chr1:22467682-22467957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 268
               

               Conread position:
               119-406
               

               Cow position:
               chr1:73561897-73561608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               119-407
               

               Cow position:
               chr1:6321961-6322245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               119-415
               

               Cow position:
               chr1:71045507-71045803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               119-439
               

               Cow position:
               chr1:3381902-3381581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 167
               

               Conread position:
               119-439
               

               Cow position:
               chr1:77553180-77552849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 262
               

               Conread position:
               119-439
               

               Cow position:
               chr1:85151427-85151109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               137, 53
               

               Conread position:
               119-439
               

               Cow position:
               chr1:96478447-96478772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 96
               

               Conread position:
               119-439
               

               Cow position:
               chr1:99223998-99223672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               108, 215
               

               Conread position:
               119-442
               

               Cow position:
               chr1:78791555-78791229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               119-446
               

               Cow position:
               chr1:83594817-83594492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 111
               

               Conread position:
               119-447
               

               Cow position:
               chr1:80764783-80764456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               92, 142
               

               Conread position:
               119-448
               

               Cow position:
               chr1:6939887-6939555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 246
               

               Conread position:
               119-448
               

               Cow position:
               chr1:26688726-26688392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 258
               

               Conread position:
               119-448
               

               Cow position:
               chr1:29975845-29975519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 25
               

               Conread position:
               119-448
               

               Cow position:
               chr1:52753414-52753079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 190
               

               Conread position:
               119-448
               

               Cow position:
               chr1:61175935-61176259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               101, 167
               

               Conread position:
               119-448
               

               Cow position:
               chr1:71135905-71136233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               119-448
               

               Cow position:
               chr1:71938759-71938428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               119-448
               

               Cow position:
               chr1:95687349-95687014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               119-454
               

               Cow position:
               chr1:55135588-55135922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               119-459
               

               Cow position:
               chr1:55146553-55146890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 129
               

               Conread position:
               119-465
               

               Cow position:
               chr1:20204778-20205125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 206
               

               Conread position:
               119-471
               

               Cow position:
               chr1:80899860-80900223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               119-478
               

               Cow position:
               chr1:45289121-45288759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               119-481
               

               Cow position:
               chr1:36931911-36932268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               119-488
               

               Cow position:
               chr1:31499379-31499745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               94, 109
               

               Conread position:
               119-488
               

               Cow position:
               chr1:63504091-63504452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               119-498
               

               Cow position:
               chr1:69264574-69264939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 23
               

               Conread position:
               119-498
               

               Cow position:
               chr1:74822203-74822580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 168
               

               Conread position:
               119-504
               

               Cow position:
               chr1:52994776-52995161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               119-505
               

               Cow position:
               chr1:53308640-53308256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               119-506
               

               Cow position:
               chr1:84255506-84255904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 242
               

               Conread position:
               119-555
               

               Cow position:
               chr1:21954466-21954038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 142
               

               Conread position:
               119-557
               

               Cow position:
               chr1:34856877-34856434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               119-558
               

               Cow position:
               chr1:95499743-95499304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               119-560
               

               Cow position:
               chr1:43839279-43839705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 144
               

               Conread position:
               119-564
               

               Cow position:
               chr1:31348156-31347736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               300
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               136, 23
               

               Conread position:
               119-565
               

               Cow position:
               chr1:36880030-36880486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 162
               

               Conread position:
               119-567
               

               Cow position:
               chr1:53520658-53521106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 240
               

               Conread position:
               119-567
               

               Cow position:
               chr1:82338033-82337579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               119-567
               

               Cow position:
               chr1:99609118-99609568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               119-570
               

               Cow position:
               chr1:97231728-97232175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 23
               

               Conread position:
               119-571
               

               Cow position:
               chr1:10632805-10633245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 113
               

               Conread position:
               119-571
               

               Cow position:
               chr1:11853938-11853481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               100, 232
               

               Conread position:
               119-571
               

               Cow position:
               chr1:20000997-20000551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               119-571
               

               Cow position:
               chr1:38278293-38277821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               119-571
               

               Cow position:
               chr1:73546163-73545703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               316
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               57, 193
               

               Conread position:
               119-571
               

               Cow position:
               chr1:95100715-95101156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               119-574
               

               Cow position:
               chr1:2075576-2075142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               343, 82
               

               Conread position:
               119-574
               

               Cow position:
               chr1:3323610-3324082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 139
               

               Conread position:
               119-574
               

               Cow position:
               chr1:13413779-13414230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               119-574
               

               Cow position:
               chr1:22730513-22730941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               265, 84
               

               Conread position:
               119-574
               

               Cow position:
               chr1:46218335-46218758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               218, 162
               

               Conread position:
               119-574
               

               Cow position:
               chr1:92197212-92197662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               119-574
               

               Cow position:
               chr1:102350006-102349548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 298
               

               Conread position:
               119-575
               

               Cow position:
               chr1:39427229-39426808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 23
               

               Conread position:
               119-575
               

               Cow position:
               chr1:68854927-68855376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 23
               

               Conread position:
               119-576
               

               Cow position:
               chr1:22836155-22836610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               137, 23
               

               Conread position:
               119-576
               

               Cow position:
               chr1:31934265-31934713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 106
               

               Conread position:
               119-576
               

               Cow position:
               chr1:68619185-68618729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               119-578
               

               Cow position:
               chr1:92963150-92963590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 147
               

               Conread position:
               119-579
               

               Cow position:
               chr1:19145166-19144721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               311
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               119-581
               

               Cow position:
               chr1:35554669-35555130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               119-581
               

               Cow position:
               chr1:42138617-42139055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               119-584
               

               Cow position:
               chr1:82936830-82936387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 97
               

               Conread position:
               119-584
               

               Cow position:
               chr1:94875926-94875445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               119-584
               

               Cow position:
               chr1:100450438-100449974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 257
               

               Conread position:
               119-585
               

               Cow position:
               chr1:69695257-69694788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 232
               

               Conread position:
               119-585
               

               Cow position:
               chr1:89510180-89509712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               119-587
               

               Cow position:
               chr1:634943-635418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               119-587
               

               Cow position:
               chr1:41181593-41182057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               119-588
               

               Cow position:
               chr1:87888154-87888613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               322
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               105, 121
               

               Conread position:
               120-266
               

               Cow position:
               chr1:98741434-98741582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               120-345
               

               Cow position:
               chr1:37646248-37646025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               120-410
               

               Cow position:
               chr1:95017760-95017486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               269, 34
               

               Conread position:
               120-427
               

               Cow position:
               chr1:53039946-53039641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               120-442
               

               Cow position:
               chr1:53423431-53423760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 247
               

               Conread position:
               120-459
               

               Cow position:
               chr1:26943063-26943400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               26, 143
               

               Conread position:
               120-486
               

               Cow position:
               chr1:49795753-49796111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               120-497
               

               Cow position:
               chr1:28176753-28177132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               120-498
               

               Cow position:
               chr1:3137686-3138042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 43
               

               Conread position:
               120-535
               

               Cow position:
               chr1:22826922-22827315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 188
               

               Conread position:
               120-535
               

               Cow position:
               chr1:76019925-76019528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               120-571
               

               Cow position:
               chr1:50931216-50930775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 74
               

               Conread position:
               120-571
               

               Cow position:
               chr1:51394172-51394623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               120-571
               

               Cow position:
               chr1:52329776-52329316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               138, 98
               

               Conread position:
               120-571
               

               Cow position:
               chr1:101834593-101835021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               265, 21
               

               Conread position:
               120-575
               

               Cow position:
               chr1:75744613-75745069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 212
               

               Conread position:
               120-576
               

               Cow position:
               chr1:63391019-63390555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               120-577
               

               Cow position:
               chr1:56477348-56477795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 22
               

               Conread position:
               120-585
               

               Cow position:
               chr1:96964072-96964539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               121-323
               

               Cow position:
               chr1:71325493-71325290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               145, 197
               

               Conread position:
               121-323
               

               Cow position:
               chr1:84447696-84447905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               121-329
               

               Cow position:
               chr1:59650020-59650230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               121-343
               

               Cow position:
               chr1:56408367-56408595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 167
               

               Conread position:
               121-346
               

               Cow position:
               chr1:77657820-77658048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               121-347
               

               Cow position:
               chr1:63905720-63905489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               95, 70
               

               Conread position:
               121-357
               

               Cow position:
               chr1:91147600-91147364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 171
               

               Conread position:
               121-364
               

               Cow position:
               chr1:63240701-63240943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               121-373
               

               Cow position:
               chr1:58419686-58419941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               91, 228
               

               Conread position:
               121-378
               

               Cow position:
               chr1:3661302-3661054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               121-446
               

               Cow position:
               chr1:20806072-20806404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               106, 228
               

               Conread position:
               121-448
               

               Cow position:
               chr1:25793686-25793359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 174
               

               Conread position:
               121-448
               

               Cow position:
               chr1:97761380-97761681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               265, 118
               

               Conread position:
               121-457
               

               Cow position:
               chr1:10071093-10070751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 229
               

               Conread position:
               121-459
               

               Cow position:
               chr1:26447218-26447533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               121-459
               

               Cow position:
               chr1:51531527-51531843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               140, 73
               

               Conread position:
               121-465
               

               Cow position:
               chr1:20384867-20384525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 175
               

               Conread position:
               121-488
               

               Cow position:
               chr1:1165354-1165723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 166
               

               Conread position:
               121-495
               

               Cow position:
               chr1:98594325-98594691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               121-501
               

               Cow position:
               chr1:71253801-71253424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 220
               

               Conread position:
               121-533
               

               Cow position:
               chr1:48580884-48581297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 232
               

               Conread position:
               121-551
               

               Cow position:
               chr1:13548236-13547795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 172
               

               Conread position:
               121-551
               

               Cow position:
               chr1:101792345-101791932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               121-567
               

               Cow position:
               chr1:45555116-45555566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               121-571
               

               Cow position:
               chr1:18937080-18936632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 195
               

               Conread position:
               121-571
               

               Cow position:
               chr1:102105488-102105942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               140, 90
               

               Conread position:
               121-581
               

               Cow position:
               chr1:42887509-42887067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 167
               

               Conread position:
               121-581
               

               Cow position:
               chr1:84812183-84811725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 152
               

               Conread position:
               122-285
               

               Cow position:
               chr1:5990669-5990833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 112
               

               Conread position:
               122-353
               

               Cow position:
               chr1:54596920-54596686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               97, 183
               

               Conread position:
               122-355
               

               Cow position:
               chr1:102425451-102425688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 224
               

               Conread position:
               122-498
               

               Cow position:
               chr1:84239352-84238994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 104
               

               Conread position:
               122-556
               

               Cow position:
               chr1:6077649-6078090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 213
               

               Conread position:
               122-571
               

               Cow position:
               chr1:874398-874868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               122-574
               

               Cow position:
               chr1:1981355-1980903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 95
               

               Conread position:
               122-582
               

               Cow position:
               chr1:37322250-37321792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 297
               

               Conread position:
               123-300
               

               Cow position:
               chr1:96635600-96635433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               124-270
               

               Cow position:
               chr1:67577824-67577974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               124-342
               

               Cow position:
               chr1:93536281-93536061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               62, 179
               

               Conread position:
               124-504
               

               Cow position:
               chr1:25281919-25281520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               124-533
               

               Cow position:
               chr1:95056812-95057210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 197
               

               Conread position:
               124-571
               

               Cow position:
               chr1:102784717-102785151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 108
               

               Conread position:
               125-265
               

               Cow position:
               chr1:43649776-43649643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               125-285
               

               Cow position:
               chr1:62996253-62996414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               125-344
               

               Cow position:
               chr1:56643831-56643611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               81, 153
               

               Conread position:
               125-348
               

               Cow position:
               chr1:51836329-51836553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               125-351
               

               Cow position:
               chr1:14528442-14528207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 140
               

               Conread position:
               125-544
               

               Cow position:
               chr1:13637912-13637487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 7
               

               Conread position:
               125-557
               

               Cow position:
               chr1:102756661-102756244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               125-571
               

               Cow position:
               chr1:41696815-41697259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               125-571
               

               Cow position:
               chr1:78091793-78092245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               126-344
               

               Cow position:
               chr1:62732334-62732555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               126-383
               

               Cow position:
               chr1:94403975-94404229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               126-410
               

               Cow position:
               chr1:62919935-62920211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               216, 55
               

               Conread position:
               126-438
               

               Cow position:
               chr1:64189261-64189572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               126-552
               

               Cow position:
               chr1:24597411-24597839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               126-587
               

               Cow position:
               chr1:44506727-44507188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               127-260
               

               Cow position:
               chr1:7583483-7583618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               127-269
               

               Cow position:
               chr1:99105122-99104980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               127-298
               

               Cow position:
               chr1:98577235-98577409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 166
               

               Conread position:
               127-307
               

               Cow position:
               chr1:4573280-4573463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               97, 135
               

               Conread position:
               127-311
               

               Cow position:
               chr1:27980908-27980732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               167, 97
               

               Conread position:
               127-312
               

               Cow position:
               chr1:30504231-30504418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               127-322
               

               Cow position:
               chr1:54732697-54732511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               127-341
               

               Cow position:
               chr1:89766524-89766302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               127-344
               

               Cow position:
               chr1:31235174-31234951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 190
               

               Conread position:
               127-352
               

               Cow position:
               chr1:20287877-20288108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               127-355
               

               Cow position:
               chr1:3035233-3035001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               127-355
               

               Cow position:
               chr1:26159672-26159441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               127-355
               

               Cow position:
               chr1:102430036-102429801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 205
               

               Conread position:
               127-360
               

               Cow position:
               chr1:68600763-68600524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 204
               

               Conread position:
               127-373
               

               Cow position:
               chr1:5409854-5409610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               99, 209
               

               Conread position:
               127-384
               

               Cow position:
               chr1:8869904-8869643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               127-414
               

               Cow position:
               chr1:82406793-82406502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 120
               

               Conread position:
               127-439
               

               Cow position:
               chr1:55158050-55157733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 204
               

               Conread position:
               127-442
               

               Cow position:
               chr1:4338947-4339266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               102, 48
               

               Conread position:
               127-443
               

               Cow position:
               chr1:44769350-44769033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               127-486
               

               Cow position:
               chr1:19465822-19466170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               259, 91
               

               Conread position:
               127-491
               

               Cow position:
               chr1:88618352-88618720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               18, 181
               

               Conread position:
               127-501
               

               Cow position:
               chr1:36874775-36875162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               127-505
               

               Cow position:
               chr1:80988106-80988482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 156
               

               Conread position:
               127-555
               

               Cow position:
               chr1:93528450-93528883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 215
               

               Conread position:
               127-557
               

               Cow position:
               chr1:71079193-71078771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               127-560
               

               Cow position:
               chr1:53622725-53623148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               127-563
               

               Cow position:
               chr1:3962924-3962479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 80
               

               Conread position:
               127-567
               

               Cow position:
               chr1:20002476-20002033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               127-571
               

               Cow position:
               chr1:51445639-51446087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 188
               

               Conread position:
               127-571
               

               Cow position:
               chr1:83082762-83083200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               127-571
               

               Cow position:
               chr1:92369476-92369955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               127-574
               

               Cow position:
               chr1:70434752-70435194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 191
               

               Conread position:
               127-574
               

               Cow position:
               chr1:97755284-97755708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 28
               

               Conread position:
               127-581
               

               Cow position:
               chr1:25383422-25383883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 256
               

               Conread position:
               128-348
               

               Cow position:
               chr1:28412564-28412355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               180, 14
               

               Conread position:
               128-348
               

               Cow position:
               chr1:88530026-88529817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               209, 14
               

               Conread position:
               128-349
               

               Cow position:
               chr1:27495258-27495470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               199, 14
               

               Conread position:
               128-350
               

               Cow position:
               chr1:70282696-70282920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               87, 211
               

               Conread position:
               128-352
               

               Cow position:
               chr1:81277440-81277215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 16
               

               Conread position:
               128-357
               

               Cow position:
               chr1:61016712-61016483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 182
               

               Conread position:
               128-451
               

               Cow position:
               chr1:26729489-26729797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               202, 14
               

               Conread position:
               128-505
               

               Cow position:
               chr1:40531348-40530966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               129-277
               

               Cow position:
               chr1:65637966-65638121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               129-280
               

               Cow position:
               chr1:85865547-85865696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               129-290
               

               Cow position:
               chr1:99222069-99221902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               129-353
               

               Cow position:
               chr1:87216223-87216446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               129-361
               

               Cow position:
               chr1:59192883-59192642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 193
               

               Conread position:
               129-446
               

               Cow position:
               chr1:76096201-76096517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               74, 106
               

               Conread position:
               129-548
               

               Cow position:
               chr1:70297033-70297464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               129-566
               

               Cow position:
               chr1:4401909-4402348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               130-295
               

               Cow position:
               chr1:92198532-92198699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               130-302
               

               Cow position:
               chr1:32631229-32631404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               130-351
               

               Cow position:
               chr1:100512359-100512585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               130-389
               

               Cow position:
               chr1:71818699-71818440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               86, 201
               

               Conread position:
               130-444
               

               Cow position:
               chr1:21934409-21934097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               146, 81
               

               Conread position:
               130-472
               

               Cow position:
               chr1:56634859-56635203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 137
               

               Conread position:
               130-477
               

               Cow position:
               chr1:85411342-85411687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               201, 235
               

               Conread position:
               130-586
               

               Cow position:
               chr1:10655240-10655696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               94, 228
               

               Conread position:
               131-571
               

               Cow position:
               chr1:4539675-4539214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               85, 157
               

               Conread position:
               132-222
               

               Cow position:
               chr1:26934776-26934686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               132-306
               

               Cow position:
               chr1:39702595-39702762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               132-312
               

               Cow position:
               chr1:28068113-28068296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               132-338
               

               Cow position:
               chr1:39555141-39555349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               132-341
               

               Cow position:
               chr1:88943084-88943296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 194
               

               Conread position:
               132-353
               

               Cow position:
               chr1:9593394-9593170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               132-355
               

               Cow position:
               chr1:25886310-25886087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               92, 133
               

               Conread position:
               132-356
               

               Cow position:
               chr1:15050123-15050341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 65
               

               Conread position:
               132-356
               

               Cow position:
               chr1:19545334-19545106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               132-380
               

               Cow position:
               chr1:94256480-94256233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 192
               

               Conread position:
               132-383
               

               Cow position:
               chr1:64962890-64962652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               132-390
               

               Cow position:
               chr1:51818706-51818965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               124, 212
               

               Conread position:
               132-439
               

               Cow position:
               chr1:68912516-68912799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               132-442
               

               Cow position:
               chr1:85596708-85597013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               132-448
               

               Cow position:
               chr1:29916179-29916495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               132-448
               

               Cow position:
               chr1:57297257-57297563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 10
               

               Conread position:
               132-454
               

               Cow position:
               chr1:83747704-83748029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               132-504
               

               Cow position:
               chr1:21460632-21461006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               123, 92
               

               Conread position:
               132-515
               

               Cow position:
               chr1:89342228-89341832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               132-566
               

               Cow position:
               chr1:55357521-55357089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 203
               

               Conread position:
               132-567
               

               Cow position:
               chr1:57576002-57575563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               132-571
               

               Cow position:
               chr1:55229749-55230178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 166
               

               Conread position:
               132-584
               

               Cow position:
               chr1:53369831-53370303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               71, 179
               

               Conread position:
               132-585
               

               Cow position:
               chr1:69678561-69678107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 155
               

               Conread position:
               133-291
               

               Cow position:
               chr1:99543283-99543123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               133-557
               

               Cow position:
               chr1:77720465-77720069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               133-570
               

               Cow position:
               chr1:27145887-27145440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               133-571
               

               Cow position:
               chr1:70227936-70227486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 158
               

               Conread position:
               134-350
               

               Cow position:
               chr1:53411143-53410931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 72
               

               Conread position:
               134-362
               

               Cow position:
               chr1:20799639-20799881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 156
               

               Conread position:
               134-571
               

               Cow position:
               chr1:10942325-10941893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 90
               

               Conread position:
               134-571
               

               Cow position:
               chr1:10964061-10964493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 90
               

               Conread position:
               134-571
               

               Cow position:
               chr1:87072471-87072899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 130
               

               Conread position:
               134-571
               

               Cow position:
               chr1:97611886-97611468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 140
               

               Conread position:
               135-380
               

               Cow position:
               chr1:95050332-95050075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 195
               

               Conread position:
               135-441
               

               Cow position:
               chr1:79278674-79278373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               135-509
               

               Cow position:
               chr1:24729072-24728694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               77, 56
               

               Conread position:
               135-557
               

               Cow position:
               chr1:43389280-43388863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 103
               

               Conread position:
               135-583
               

               Cow position:
               chr1:64302466-64302033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 71
               

               Conread position:
               135-584
               

               Cow position:
               chr1:3429741-3429296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               136-271
               

               Cow position:
               chr1:53650659-53650800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               136-295
               

               Cow position:
               chr1:87083435-87083595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 6
               

               Conread position:
               136-333
               

               Cow position:
               chr1:49753703-49753896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               136-339
               

               Cow position:
               chr1:54163041-54162832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               136-351
               

               Cow position:
               chr1:53540157-53540377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               136-352
               

               Cow position:
               chr1:101812506-101812289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               136-383
               

               Cow position:
               chr1:43448055-43447813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               136-445
               

               Cow position:
               chr1:73761583-73761275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               194, 79
               

               Conread position:
               136-540
               

               Cow position:
               chr1:31348672-31348261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               136-557
               

               Cow position:
               chr1:78809652-78810071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 88
               

               Conread position:
               136-569
               

               Cow position:
               chr1:86672460-86672016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 178
               

               Conread position:
               136-582
               

               Cow position:
               chr1:43358245-43357789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 6
               

               Conread position:
               137-323
               

               Cow position:
               chr1:86484727-86484923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               137-330
               

               Cow position:
               chr1:55194694-55194499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               140, 71
               

               Conread position:
               137-353
               

               Cow position:
               chr1:5061790-5062015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               137-581
               

               Cow position:
               chr1:64804338-64803882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 175
               

               Conread position:
               138-350
               

               Cow position:
               chr1:78750922-78750701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               138-548
               

               Cow position:
               chr1:53397758-53398155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 149
               

               Conread position:
               138-555
               

               Cow position:
               chr1:88926609-88926187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 66
               

               Conread position:
               138-557
               

               Cow position:
               chr1:89381049-89381465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 73
               

               Conread position:
               138-559
               

               Cow position:
               chr1:72103619-72104047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               138-568
               

               Cow position:
               chr1:57155631-57155218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 146
               

               Conread position:
               138-571
               

               Cow position:
               chr1:55705483-55705042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 281
               

               Conread position:
               138-584
               

               Cow position:
               chr1:81515010-81515456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 159
               

               Conread position:
               138-584
               

               Cow position:
               chr1:89076865-89076407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               139-303
               

               Cow position:
               chr1:92010085-92010256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               139-488
               

               Cow position:
               chr1:44125869-44125517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               139-488
               

               Cow position:
               chr1:52052932-52052597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               77, 96
               

               Conread position:
               139-571
               

               Cow position:
               chr1:4691364-4691793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               139-574
               

               Cow position:
               chr1:14981346-14980930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               140-569
               

               Cow position:
               chr1:12464891-12464462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 208
               

               Conread position:
               140-574
               

               Cow position:
               chr1:15333653-15334097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               141-382
               

               Cow position:
               chr1:99614221-99614463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 162
               

               Conread position:
               141-571
               

               Cow position:
               chr1:70422074-70422507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               85, 198
               

               Conread position:
               142-338
               

               Cow position:
               chr1:67008963-67008771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               142-382
               

               Cow position:
               chr1:4293837-4294071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               188, 85
               

               Conread position:
               142-448
               

               Cow position:
               chr1:69415942-69415629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               142-584
               

               Cow position:
               chr1:26200995-26201451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               70, 112
               

               Conread position:
               143-490
               

               Cow position:
               chr1:15691113-15691453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               144-346
               

               Cow position:
               chr1:71952864-71953058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               190, 71
               

               Conread position:
               144-353
               

               Cow position:
               chr1:342368-342155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 204
               

               Conread position:
               144-368
               

               Cow position:
               chr1:78154948-78154723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 195
               

               Conread position:
               144-529
               

               Cow position:
               chr1:7186564-7186953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               63, 191
               

               Conread position:
               145-571
               

               Cow position:
               chr1:49317735-49317296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 217
               

               Conread position:
               145-571
               

               Cow position:
               chr1:74929942-74929503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               145-574
               

               Cow position:
               chr1:34771726-34771291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 168
               

               Conread position:
               145-574
               

               Cow position:
               chr1:86279193-86279625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               146-433
               

               Cow position:
               chr1:52956038-52956317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               181, 69
               

               Conread position:
               146-459
               

               Cow position:
               chr1:26702429-26702115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               70, 234
               

               Conread position:
               146-509
               

               Cow position:
               chr1:93043804-93044157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 140
               

               Conread position:
               146-554
               

               Cow position:
               chr1:11728956-11729359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 198
               

               Conread position:
               146-556
               

               Cow position:
               chr1:98030693-98031105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               147-439
               

               Cow position:
               chr1:80363417-80363124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 207
               

               Conread position:
               147-498
               

               Cow position:
               chr1:98461070-98461417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               147-584
               

               Cow position:
               chr1:7971210-7971621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 63
               

               Conread position:
               148-498
               

               Cow position:
               chr1:53671969-53671621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               148-574
               

               Cow position:
               chr1:6305088-6304669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 204
               

               Conread position:
               149-291
               

               Cow position:
               chr1:52913087-52912950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               149-541
               

               Cow position:
               chr1:49433483-49433086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               149-561
               

               Cow position:
               chr1:85867376-85867795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               149-571
               

               Cow position:
               chr1:16962232-16961789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 202
               

               Conread position:
               149-571
               

               Cow position:
               chr1:81228558-81228131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 155
               

               Conread position:
               150-282
               

               Cow position:
               chr1:8287831-8287694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               150-347
               

               Cow position:
               chr1:53613410-53613212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               150-587
               

               Cow position:
               chr1:26179032-26178586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 141
               

               Conread position:
               151-437
               

               Cow position:
               chr1:95654932-95654643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               65, 145
               

               Conread position:
               151-552
               

               Cow position:
               chr1:96305185-96304786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               152-347
               

               Cow position:
               chr1:68995956-68996165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               152-492
               

               Cow position:
               chr1:84910849-84910525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               152-575
               

               Cow position:
               chr1:74956239-74955823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 263
               

               Conread position:
               153-346
               

               Cow position:
               chr1:101207619-101207804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               177, 7
               

               Conread position:
               153-373
               

               Cow position:
               chr1:77502994-77502781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               103, 76
               

               Conread position:
               153-459
               

               Cow position:
               chr1:3167287-3166984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 157
               

               Conread position:
               153-459
               

               Cow position:
               chr1:19885170-19885473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               154-567
               

               Cow position:
               chr1:43872545-43872108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               155-571
               

               Cow position:
               chr1:5423947-5423528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               178, 138
               

               Conread position:
               157-290
               

               Cow position:
               chr1:99792601-99792740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               157-557
               

               Cow position:
               chr1:99512463-99512072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 124
               

               Conread position:
               158-334
               

               Cow position:
               chr1:41954463-41954276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               158-442
               

               Cow position:
               chr1:57946096-57945799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               158-471
               

               Cow position:
               chr1:62291895-62291597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 58
               

               Conread position:
               158-505
               

               Cow position:
               chr1:71643873-71643522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 162
               

               Conread position:
               158-558
               

               Cow position:
               chr1:679821-679416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               68, 146
               

               Conread position:
               158-567
               

               Cow position:
               chr1:75382782-75383164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               158-584
               

               Cow position:
               chr1:90976292-90975858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               158-586
               

               Cow position:
               chr1:68862826-68863239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               159-459
               

               Cow position:
               chr1:58825340-58825633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               159-491
               

               Cow position:
               chr1:100393373-100393036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               159-559
               

               Cow position:
               chr1:86482695-86483100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               159-570
               

               Cow position:
               chr1:31608109-31607690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 226
               

               Conread position:
               159-584
               

               Cow position:
               chr1:21955582-21955154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 189
               

               Conread position:
               160-359
               

               Cow position:
               chr1:11988363-11988164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 168
               

               Conread position:
               160-451
               

               Cow position:
               chr1:98310854-98311156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 199
               

               Conread position:
               160-498
               

               Cow position:
               chr1:62036593-62036934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 94
               

               Conread position:
               160-579
               

               Cow position:
               chr1:38753713-38754130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               161-584
               

               Cow position:
               chr1:70094131-70094556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               57, 190
               

               Conread position:
               162-381
               

               Cow position:
               chr1:32013751-32013967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 168
               

               Conread position:
               162-384
               

               Cow position:
               chr1:84170282-84170492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               187, 60
               

               Conread position:
               162-454
               

               Cow position:
               chr1:101867150-101867437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               162-490
               

               Cow position:
               chr1:75141801-75142118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               162-579
               

               Cow position:
               chr1:4414413-4414016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 231
               

               Conread position:
               165-295
               

               Cow position:
               chr1:99570667-99570535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               165-567
               

               Cow position:
               chr1:28563771-28563360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               165-571
               

               Cow position:
               chr1:63138636-63139049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 171
               

               Conread position:
               165-585
               

               Cow position:
               chr1:46030555-46030144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               166-368
               

               Cow position:
               chr1:89438137-89437938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               166-584
               

               Cow position:
               chr1:5597400-5596992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               166-585
               

               Cow position:
               chr1:43340824-43340411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 179
               

               Conread position:
               167-498
               

               Cow position:
               chr1:94261347-94261664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               168-319
               

               Cow position:
               chr1:7449933-7450084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 49
               

               Conread position:
               168-336
               

               Cow position:
               chr1:81470929-81471104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               168-459
               

               Cow position:
               chr1:91039375-91039082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               168-571
               

               Cow position:
               chr1:84906267-84905855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 115
               

               Conread position:
               168-584
               

               Cow position:
               chr1:24542781-24542349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 326
               

               Conread position:
               169-441
               

               Cow position:
               chr1:51654212-51654498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               169-500
               

               Cow position:
               chr1:18780528-18780198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               177, 13
               

               Conread position:
               171-571
               

               Cow position:
               chr1:76037702-76037307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 111
               

               Conread position:
               171-574
               

               Cow position:
               chr1:40192874-40192495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               214, 34
               

               Conread position:
               172-428
               

               Cow position:
               chr1:61742659-61742400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               52, 179
               

               Conread position:
               172-445
               

               Cow position:
               chr1:89497770-89498031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               172-446
               

               Cow position:
               chr1:6788485-6788204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 185
               

               Conread position:
               172-584
               

               Cow position:
               chr1:70343844-70344264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 162
               

               Conread position:
               173-410
               

               Cow position:
               chr1:82443651-82443411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 144
               

               Conread position:
               173-521
               

               Cow position:
               chr1:32001515-32001167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               173-540
               

               Cow position:
               chr1:96277249-96276879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 173
               

               Conread position:
               173-568
               

               Cow position:
               chr1:24909248-24908841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               174-459
               

               Cow position:
               chr1:43703220-43703501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               174-556
               

               Cow position:
               chr1:49082529-49082936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 197
               

               Conread position:
               174-557
               

               Cow position:
               chr1:58754978-58754607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 32
               

               Conread position:
               175-353
               

               Cow position:
               chr1:83594000-83593813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               175-377
               

               Cow position:
               chr1:102113301-102113089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               175-579
               

               Cow position:
               chr1:83072251-83072653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               176-561
               

               Cow position:
               chr1:13810457-13810846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               176-574
               

               Cow position:
               chr1:724543-724947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               176-574
               

               Cow position:
               chr1:25734662-25735076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               37, 166
               

               Conread position:
               178-498
               

               Cow position:
               chr1:98511739-98512055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 156
               

               Conread position:
               179-571
               

               Cow position:
               chr1:42398385-42397991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               180-345
               

               Cow position:
               chr1:89082920-89083093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               180-574
               

               Cow position:
               chr1:63530393-63530768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               181-339
               

               Cow position:
               chr1:69378936-69378773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               181-569
               

               Cow position:
               chr1:71227890-71228298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 209
               

               Conread position:
               181-571
               

               Cow position:
               chr1:33207061-33206669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               34, 133
               

               Conread position:
               181-571
               

               Cow position:
               chr1:54156927-54156529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 139
               

               Conread position:
               181-574
               

               Cow position:
               chr1:57880979-57880573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 178
               

               Conread position:
               182-384
               

               Cow position:
               chr1:24413254-24413467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               182-498
               

               Cow position:
               chr1:5579876-5580184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               183-305
               

               Cow position:
               chr1:86578764-86578890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               183-347
               

               Cow position:
               chr1:3243754-3243921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               183-410
               

               Cow position:
               chr1:99039537-99039312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               183-492
               

               Cow position:
               chr1:75933088-75933391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               33, 185
               

               Conread position:
               183-586
               

               Cow position:
               chr1:68763866-68763463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               186-447
               

               Cow position:
               chr1:99062103-99061843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               187-548
               

               Cow position:
               chr1:65905188-65904813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 283
               

               Conread position:
               187-574
               

               Cow position:
               chr1:24778159-24777776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               143, 29
               

               Conread position:
               187-585
               

               Cow position:
               chr1:90621695-90621285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 140
               

               Conread position:
               188-391
               

               Cow position:
               chr1:100812744-100812551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               188-574
               

               Cow position:
               chr1:20667921-20667542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               190-571
               

               Cow position:
               chr1:92580586-92580964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               191-347
               

               Cow position:
               chr1:80631522-80631683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               191-428
               

               Cow position:
               chr1:24445805-24445567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               191-439
               

               Cow position:
               chr1:95178774-95179026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 159
               

               Conread position:
               192-485
               

               Cow position:
               chr1:42545959-42545661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               193-501
               

               Cow position:
               chr1:91875085-91874783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               194-576
               

               Cow position:
               chr1:65318403-65318789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               194-584
               

               Cow position:
               chr1:484639-484244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               195-492
               

               Cow position:
               chr1:24876093-24876385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               195-571
               

               Cow position:
               chr1:85688013-85688390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               196-584
               

               Cow position:
               chr1:51417605-51417982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               197-505
               

               Cow position:
               chr1:57420896-57420598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               197-571
               

               Cow position:
               chr1:59518750-59519116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               198-359
               

               Cow position:
               chr1:101280885-101280725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               198-500
               

               Cow position:
               chr1:101632508-101632205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 152
               

               Conread position:
               198-571
               

               Cow position:
               chr1:16061188-16060803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               198-574
               

               Cow position:
               chr1:22525711-22526083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               198-585
               

               Cow position:
               chr1:42175559-42175946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 13
               

               Conread position:
               200-442
               

               Cow position:
               chr1:77683190-77683427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               201-571
               

               Cow position:
               chr1:10519205-10518824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 182
               

               Conread position:
               201-571
               

               Cow position:
               chr1:64572349-64572719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 143
               

               Conread position:
               202-346
               

               Cow position:
               chr1:63314667-63314811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 12
               

               Conread position:
               203-311
               

               Cow position:
               chr1:427083-426972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               203-348
               

               Cow position:
               chr1:50907556-50907415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               203-431
               

               Cow position:
               chr1:85301256-85301481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               183, 105
               

               Conread position:
               203-447
               

               Cow position:
               chr1:102291314-102291067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 163
               

               Conread position:
               203-579
               

               Cow position:
               chr1:76613295-76612919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 99
               

               Conread position:
               204-579
               

               Cow position:
               chr1:78066704-78066329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               23, 27
               

               Conread position:
               207-454
               

               Cow position:
               chr1:101946867-101946627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               210-579
               

               Cow position:
               chr1:96038951-96038586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               211-480
               

               Cow position:
               chr1:12978526-12978795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 138
               

               Conread position:
               211-579
               

               Cow position:
               chr1:87197673-87198042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 70
               

               Conread position:
               212-334
               

               Cow position:
               chr1:100745453-100745577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               212-345
               

               Cow position:
               chr1:80311317-80311446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               212-348
               

               Cow position:
               chr1:20544142-20544277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               212-351
               

               Cow position:
               chr1:85826193-85826329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               212-361
               

               Cow position:
               chr1:31960071-31960222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               212-383
               

               Cow position:
               chr1:51684650-51684822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               212-415
               

               Cow position:
               chr1:70028429-70028628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               177, 124
               

               Conread position:
               212-433
               

               Cow position:
               chr1:89508403-89508617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               172, 116
               

               Conread position:
               212-442
               

               Cow position:
               chr1:9470551-9470323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 132
               

               Conread position:
               212-442
               

               Cow position:
               chr1:73196384-73196154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               174, 66
               

               Conread position:
               212-448
               

               Cow position:
               chr1:2997792-2998028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               212-454
               

               Cow position:
               chr1:70026497-70026258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               177, 120
               

               Conread position:
               212-464
               

               Cow position:
               chr1:87211792-87212029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               172, 51
               

               Conread position:
               212-487
               

               Cow position:
               chr1:75347467-75347744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               212-488
               

               Cow position:
               chr1:60281217-60281494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 109
               

               Conread position:
               212-492
               

               Cow position:
               chr1:93554690-93554959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               212-498
               

               Cow position:
               chr1:3882618-3882330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               113, 97
               

               Conread position:
               212-501
               

               Cow position:
               chr1:41115868-41115587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               118, 127
               

               Conread position:
               212-504
               

               Cow position:
               chr1:67305394-67305104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 65
               

               Conread position:
               212-548
               

               Cow position:
               chr1:46036113-46035766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               212-554
               

               Cow position:
               chr1:33409781-33409435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 134
               

               Conread position:
               212-555
               

               Cow position:
               chr1:78096783-78097115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               212-557
               

               Cow position:
               chr1:24581430-24581757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               212-557
               

               Cow position:
               chr1:98413613-98413967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               212-558
               

               Cow position:
               chr1:98453432-98453787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 225
               

               Conread position:
               212-559
               

               Cow position:
               chr1:17196782-17196432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 32
               

               Conread position:
               212-562
               

               Cow position:
               chr1:14309191-14308833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 254
               

               Conread position:
               212-566
               

               Cow position:
               chr1:96081331-96081678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               212-571
               

               Cow position:
               chr1:83659427-83659070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               212-576
               

               Cow position:
               chr1:14206309-14205955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               212-579
               

               Cow position:
               chr1:62519204-62519580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 185
               

               Conread position:
               212-580
               

               Cow position:
               chr1:86682716-86682353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               212-581
               

               Cow position:
               chr1:53369054-53369414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               212-581
               

               Cow position:
               chr1:86110884-86110530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 120
               

               Conread position:
               212-581
               

               Cow position:
               chr1:88913164-88913535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               212-585
               

               Cow position:
               chr1:76740837-76740453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               213-578
               

               Cow position:
               chr1:22192611-22192982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               214-347
               

               Cow position:
               chr1:65909375-65909510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               214-498
               

               Cow position:
               chr1:97696589-97696873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               47, 206
               

               Conread position:
               214-511
               

               Cow position:
               chr1:74927729-74928026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               214-557
               

               Cow position:
               chr1:101866648-101866309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               214-567
               

               Cow position:
               chr1:95557885-95558240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               214-571
               

               Cow position:
               chr1:55429107-55428748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               214-577
               

               Cow position:
               chr1:23186948-23186592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               215-459
               

               Cow position:
               chr1:70312955-70312699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               177, 93
               

               Conread position:
               215-567
               

               Cow position:
               chr1:31272591-31272254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               169, 93
               

               Conread position:
               216-442
               

               Cow position:
               chr1:23512804-23512584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               169, 81
               

               Conread position:
               216-544
               

               Cow position:
               chr1:91811638-91811960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               256, 65
               

               Conread position:
               217-501
               

               Cow position:
               chr1:85647930-85647648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 131
               

               Conread position:
               218-585
               

               Cow position:
               chr1:91023615-91023248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 174
               

               Conread position:
               219-573
               

               Cow position:
               chr1:39225071-39224732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               220-556
               

               Cow position:
               chr1:20950576-20950907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               169, 110
               

               Conread position:
               220-575
               

               Cow position:
               chr1:6228730-6228370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               221-567
               

               Cow position:
               chr1:101860634-101860286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               222-443
               

               Cow position:
               chr1:87440325-87440543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               111, 75
               

               Conread position:
               222-498
               

               Cow position:
               chr1:41047444-41047173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               222-555
               

               Cow position:
               chr1:2976138-2975800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               222-574
               

               Cow position:
               chr1:78838656-78838996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 10
               

               Conread position:
               223-574
               

               Cow position:
               chr1:11172234-11172576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               224-567
               

               Cow position:
               chr1:86057199-86056877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 56
               

               Conread position:
               224-584
               

               Cow position:
               chr1:29451777-29452141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               225-570
               

               Cow position:
               chr1:43855160-43855493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               226-478
               

               Cow position:
               chr1:30047733-30047492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               226-519
               

               Cow position:
               chr1:5539417-5539124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               226-567
               

               Cow position:
               chr1:89448758-89449099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 254
               

               Conread position:
               226-571
               

               Cow position:
               chr1:92997038-92996681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               227-477
               

               Cow position:
               chr1:89230366-89230121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               157, 50
               

               Conread position:
               227-488
               

               Cow position:
               chr1:24407025-24406776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               157, 27
               

               Conread position:
               227-501
               

               Cow position:
               chr1:85550216-85549942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               103, 117
               

               Conread position:
               227-560
               

               Cow position:
               chr1:97090189-97090511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 56
               

               Conread position:
               227-570
               

               Cow position:
               chr1:47886627-47886278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               227-571
               

               Cow position:
               chr1:8129105-8128774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               228-574
               

               Cow position:
               chr1:4243480-4243122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               229-496
               

               Cow position:
               chr1:72731902-72732168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               229-560
               

               Cow position:
               chr1:101983289-101982956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 132
               

               Conread position:
               230-523
               

               Cow position:
               chr1:86073459-86073750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               230-571
               

               Cow position:
               chr1:648188-648533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 101
               

               Conread position:
               233-560
               

               Cow position:
               chr1:101715219-101714886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 119
               

               Conread position:
               233-582
               

               Cow position:
               chr1:5010972-5010618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               233-584
               

               Cow position:
               chr1:35600429-35600074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               234-585
               

               Cow position:
               chr1:78079596-78079943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               238-501
               

               Cow position:
               chr1:100569024-100569288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               238-560
               

               Cow position:
               chr1:95637702-95638029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               241-574
               

               Cow position:
               chr1:65028405-65028727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               43, 238
               

               Conread position:
               244-571
               

               Cow position:
               chr1:4701794-4701466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               244-574
               

               Cow position:
               chr1:20104147-20104474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 81
               

               Conread position:
               244-578
               

               Cow position:
               chr1:3607689-3608007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               244-580
               

               Cow position:
               chr1:43311897-43311552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               244-584
               

               Cow position:
               chr1:71666063-71665715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               244-588
               

               Cow position:
               chr1:79640411-79640068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               245-430
               

               Cow position:
               chr1:8984805-8984619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               91, 77
               

               Conread position:
               245-557
               

               Cow position:
               chr1:72813492-72813808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               12, 111
               

               Conread position:
               246-384
               

               Cow position:
               chr1:9437428-9437290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-557
               

               Cow position:
               chr1:47288120-47288435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               246-571
               

               Cow position:
               chr1:72105293-72105605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               246-571
               

               Cow position:
               chr1:77986542-77986211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               246-571
               

               Cow position:
               chr1:84104173-84103853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 87
               

               Conread position:
               246-571
               

               Cow position:
               chr1:89388224-89388548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               246-574
               

               Cow position:
               chr1:261598-261256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               247-579
               

               Cow position:
               chr1:26934379-26934055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               139, 36
               

               Conread position:
               248-566
               

               Cow position:
               chr1:42541478-42541791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               249-574
               

               Cow position:
               chr1:6826405-6826084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               136, 58
               

               Conread position:
               250-571
               

               Cow position:
               chr1:42482087-42482405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 96
               

               Conread position:
               253-441
               

               Cow position:
               chr1:91370121-91369935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               253-504
               

               Cow position:
               chr1:45553356-45553108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               253-540
               

               Cow position:
               chr1:7023008-7023292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 54
               

               Conread position:
               253-560
               

               Cow position:
               chr1:69551596-69551285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               132, 31
               

               Conread position:
               253-561
               

               Cow position:
               chr1:98059937-98060254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               87, 106
               

               Conread position:
               253-567
               

               Cow position:
               chr1:23999033-23998723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 28
               

               Conread position:
               253-571
               

               Cow position:
               chr1:10716390-10716710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               253-571
               

               Cow position:
               chr1:56618763-56618451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 89
               

               Conread position:
               253-574
               

               Cow position:
               chr1:41138244-41137940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               133, 83
               

               Conread position:
               253-574
               

               Cow position:
               chr1:56225681-56225990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               253-574
               

               Cow position:
               chr1:78794337-78794028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               132, 77
               

               Conread position:
               253-584
               

               Cow position:
               chr1:81477981-81477644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               133, 10
               

               Conread position:
               254-501
               

               Cow position:
               chr1:61543029-61542784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 78
               

               Conread position:
               254-568
               

               Cow position:
               chr1:22944137-22943826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 94
               

               Conread position:
               255-482
               

               Cow position:
               chr1:43822290-43822514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               255-498
               

               Cow position:
               chr1:67688691-67688452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               255-498
               

               Cow position:
               chr1:81580066-81580306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               255-584
               

               Cow position:
               chr1:635795-635466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               130, 92
               

               Conread position:
               256-571
               

               Cow position:
               chr1:8374561-8374248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               257-499
               

               Cow position:
               chr1:6752336-6752101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               259-571
               

               Cow position:
               chr1:10616774-10617096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               126, 172
               

               Conread position:
               263-471
               

               Cow position:
               chr1:19227157-19226953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               264-571
               

               Cow position:
               chr1:4391384-4391063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               264-571
               

               Cow position:
               chr1:22823804-22824114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               264-571
               

               Cow position:
               chr1:46030858-46031166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 79
               

               Conread position:
               264-574
               

               Cow position:
               chr1:48618343-48618039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               264-581
               

               Cow position:
               chr1:71350824-71350509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               264-584
               

               Cow position:
               chr1:71399184-71399511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               264-584
               

               Cow position:
               chr1:98583662-98583964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               265-529
               

               Cow position:
               chr1:51044406-51044145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 81
               

               Conread position:
               265-570
               

               Cow position:
               chr1:77232668-77232365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               265-579
               

               Cow position:
               chr1:82513456-82513138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 203
               

               Conread position:
               266-587
               

               Cow position:
               chr1:75250013-75250333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               267-571
               

               Cow position:
               chr1:102306243-102305942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               268-579
               

               Cow position:
               chr1:30189049-30189370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               270-471
               

               Cow position:
               chr1:99793446-99793651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               271-574
               

               Cow position:
               chr1:627867-628176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 71
               

               Conread position:
               272-574
               

               Cow position:
               chr1:90904847-90904549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 62
               

               Conread position:
               273-584
               

               Cow position:
               chr1:17875803-17875493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               77, 137
               

               Conread position:
               274-500
               

               Cow position:
               chr1:4581418-4581200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               112, 33
               

               Conread position:
               275-573
               

               Cow position:
               chr1:100576130-100575834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               276-579
               

               Cow position:
               chr1:79135190-79135492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               276-579
               

               Cow position:
               chr1:96558924-96558634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               189, 58
               

               Conread position:
               280-551
               

               Cow position:
               chr1:33913735-33914016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               281-496
               

               Cow position:
               chr1:50991850-50992061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 39
               

               Conread position:
               281-498
               

               Cow position:
               chr1:95153135-95153351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               281-569
               

               Cow position:
               chr1:100474147-100474442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               283-438
               

               Cow position:
               chr1:41695517-41695671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               284-522
               

               Cow position:
               chr1:80841571-80841799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               102, 53
               

               Conread position:
               284-571
               

               Cow position:
               chr1:8287719-8287425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               284-571
               

               Cow position:
               chr1:73458175-73457889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               181, 56
               

               Conread position:
               284-576
               

               Cow position:
               chr1:47790747-47790459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               284-578
               

               Cow position:
               chr1:49825151-49824853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               285-446
               

               Cow position:
               chr1:61560807-61560644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               286-554
               

               Cow position:
               chr1:5128364-5128643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               286-576
               

               Cow position:
               chr1:53402702-53402993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               202, 63
               

               Conread position:
               286-579
               

               Cow position:
               chr1:48214241-48213932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 49
               

               Conread position:
               287-571
               

               Cow position:
               chr1:74751713-74751423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               287-586
               

               Cow position:
               chr1:52467223-52467506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               290-563
               

               Cow position:
               chr1:79003898-79004173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               94, 132
               

               Conread position:
               290-574
               

               Cow position:
               chr1:35671466-35671744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               293-566
               

               Cow position:
               chr1:89158202-89157929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 192
               

               Conread position:
               294-567
               

               Cow position:
               chr1:30983562-30983291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 48
               

               Conread position:
               295-571
               

               Cow position:
               chr1:3965769-3966034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               297-557
               

               Cow position:
               chr1:45223511-45223767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               298-569
               

               Cow position:
               chr1:46143530-46143264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               298-574
               

               Cow position:
               chr1:43286274-43286537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 168
               

               Conread position:
               298-586
               

               Cow position:
               chr1:52139700-52139410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               300-563
               

               Cow position:
               chr1:95072264-95072540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               300-584
               

               Cow position:
               chr1:54267999-54267719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               303-581
               

               Cow position:
               chr1:67654384-67654110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               303-584
               

               Cow position:
               chr1:48206598-48206321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               304-570
               

               Cow position:
               chr1:80584369-80584632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               304-571
               

               Cow position:
               chr1:88359819-88360090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               304-576
               

               Cow position:
               chr1:101507296-101507560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               305-581
               

               Cow position:
               chr1:50432548-50432267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               306-557
               

               Cow position:
               chr1:64113854-64113609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               306-566
               

               Cow position:
               chr1:79146881-79146614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               307-575
               

               Cow position:
               chr1:3942269-3942007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               307-585
               

               Cow position:
               chr1:70175600-70175322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               124, 80
               

               Conread position:
               307-586
               

               Cow position:
               chr1:52912956-52912673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               309-585
               

               Cow position:
               chr1:52662231-52661959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               311-570
               

               Cow position:
               chr1:81481439-81481182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 169
               

               Conread position:
               311-577
               

               Cow position:
               chr1:79630969-79630708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 111
               

               Conread position:
               312-579
               

               Cow position:
               chr1:57089737-57089466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               312-584
               

               Cow position:
               chr1:86688209-86687945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               138, 29
               

               Conread position:
               314-585
               

               Cow position:
               chr1:92590143-92590394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               316-574
               

               Cow position:
               chr1:500123-500384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               317-576
               

               Cow position:
               chr1:53603705-53603968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               319-568
               

               Cow position:
               chr1:97833663-97833899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               320-575
               

               Cow position:
               chr1:102529902-102529644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               325-571
               

               Cow position:
               chr1:85771968-85772209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               329-570
               

               Cow position:
               chr1:77739681-77739929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               329-574
               

               Cow position:
               chr1:33998721-33998957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               329-584
               

               Cow position:
               chr1:5751276-5751531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               331-574
               

               Cow position:
               chr1:89158737-89158500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               334-570
               

               Cow position:
               chr1:81858937-81858697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               335-561
               

               Cow position:
               chr1:95835833-95835600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               335-574
               

               Cow position:
               chr1:98911977-98912216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               335-581
               

               Cow position:
               chr1:82537898-82538142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               337-557
               

               Cow position:
               chr1:62034859-62034644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               338-471
               

               Cow position:
               chr1:82556439-82556308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               338-567
               

               Cow position:
               chr1:49980680-49980909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               339-567
               

               Cow position:
               chr1:41027046-41027273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               340-567
               

               Cow position:
               chr1:73721332-73721565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               340-571
               

               Cow position:
               chr1:6731153-6731384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               341-575
               

               Cow position:
               chr1:83025192-83024958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 33
               

               Conread position:
               342-526
               

               Cow position:
               chr1:19962028-19962209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               343-568
               

               Cow position:
               chr1:36079799-36080029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               343-585
               

               Cow position:
               chr1:100852686-100852920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               344-571
               

               Cow position:
               chr1:27959574-27959342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               345-567
               

               Cow position:
               chr1:95618620-95618842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               347-567
               

               Cow position:
               chr1:24530481-24530699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               350-579
               

               Cow position:
               chr1:55753233-55753006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               352-579
               

               Cow position:
               chr1:45315652-45315418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               354-567
               

               Cow position:
               chr1:759432-759211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               360-571
               

               Cow position:
               chr1:15102882-15103089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               148, 5
               

               Conread position:
               360-574
               

               Cow position:
               chr1:68688575-68688787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 132
               

               Conread position:
               361-571
               

               Cow position:
               chr1:40212339-40212143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               361-584
               

               Cow position:
               chr1:93590592-93590373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               362-585
               

               Cow position:
               chr1:99605193-99604974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               363-561
               

               Cow position:
               chr1:61011176-61011370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 120
               

               Conread position:
               363-586
               

               Cow position:
               chr1:66752634-66752410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               372-574
               

               Cow position:
               chr1:100573623-100573420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               372-581
               

               Cow position:
               chr1:42774915-42775121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               120, 149
               

               Conread position:
               374-571
               

               Cow position:
               chr1:70483328-70483130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               374-579
               

               Cow position:
               chr1:71946078-71945867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               377-574
               

               Cow position:
               chr1:55685969-55685770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               377-584
               

               Cow position:
               chr1:524817-525024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               378-574
               

               Cow position:
               chr1:50585868-50585668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 108
               

               Conread position:
               379-571
               

               Cow position:
               chr1:25022064-25021873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 106
               

               Conread position:
               380-584
               

               Cow position:
               chr1:4329888-4329690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               383-581
               

               Cow position:
               chr1:69378583-69378382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               107, 84
               

               Conread position:
               383-584
               

               Cow position:
               chr1:102730746-102730535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               383-586
               

               Cow position:
               chr1:85339403-85339595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               384-584
               

               Cow position:
               chr1:76474540-76474341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               104, 83
               

               Conread position:
               386-573
               

               Cow position:
               chr1:11708999-11708818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 92
               

               Conread position:
               387-557
               

               Cow position:
               chr1:1799048-1799223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               389-574
               

               Cow position:
               chr1:77099098-77098919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               393-576
               

               Cow position:
               chr1:62469087-62469268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               393-576
               

               Cow position:
               chr1:102523615-102523429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 136
               

               Conread position:
               394-571
               

               Cow position:
               chr1:47242436-47242255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               395-560
               

               Cow position:
               chr1:91743431-91743269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               395-569
               

               Cow position:
               chr1:29671196-29671017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               395-571
               

               Cow position:
               chr1:64811264-64811442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               395-571
               

               Cow position:
               chr1:100800741-100800564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               395-574
               

               Cow position:
               chr1:70416732-70416553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 174
               

               Conread position:
               395-574
               

               Cow position:
               chr1:98742050-98742224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               395-581
               

               Cow position:
               chr1:5872751-5872558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               395-581
               

               Cow position:
               chr1:71636295-71636113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 66
               

               Conread position:
               395-581
               

               Cow position:
               chr1:89835745-89835924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               395-583
               

               Cow position:
               chr1:85622557-85622747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 65
               

               Conread position:
               395-584
               

               Cow position:
               chr1:23101705-23101894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 17
               

               Conread position:
               396-574
               

               Cow position:
               chr1:30028200-30028024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               396-584
               

               Cow position:
               chr1:77810731-77810545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               398-574
               

               Cow position:
               chr1:63460909-63461086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               398-579
               

               Cow position:
               chr1:32014227-32014406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               170, 86
               

               Conread position:
               399-571
               

               Cow position:
               chr1:100823069-100823245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               400-572
               

               Cow position:
               chr1:46354406-46354233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               403-567
               

               Cow position:
               chr1:92363627-92363469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               403-581
               

               Cow position:
               chr1:41022455-41022632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 81
               

               Conread position:
               404-584
               

               Cow position:
               chr1:7965883-7966066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               405-571
               

               Cow position:
               chr1:53456849-53457017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               405-576
               

               Cow position:
               chr1:10470464-10470632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               405-584
               

               Cow position:
               chr1:79170115-79169934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 136
               

               Conread position:
               408-570
               

               Cow position:
               chr1:19384415-19384253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-581
               

               Cow position:
               chr1:67674561-67674393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               413-574
               

               Cow position:
               chr1:53474202-53474356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               418-584
               

               Cow position:
               chr1:93235879-93235716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               421-570
               

               Cow position:
               chr1:95976387-95976537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               421-574
               

               Cow position:
               chr1:92578779-92578626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-584
               

               Cow position:
               chr1:80423678-80423514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               423-571
               

               Cow position:
               chr1:39095544-39095690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               423-581
               

               Cow position:
               chr1:70476695-70476537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               424-585
               

               Cow position:
               chr1:50906623-50906462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               427-574
               

               Cow position:
               chr1:2523022-2523172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.
Conread position:	96-266
Cow position:	chr1:71715901-71716079 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	129
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	24, 0
Conread position:	98-488
Cow position:	chr1:42874216-42873828 (view UCSC Genome Browser custom track)
Alignm length:	397
Alignm identity:	288
Alignm E-value:	0
Alignm gaps (pig, cow):	119, 185
Conread position:	99-501
Cow position:	chr1:4290890-4291298 (view UCSC Genome Browser custom track)
Alignm length:	414
Alignm identity:	296
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 30
Conread position:	100-347
Cow position:	chr1:82504700-82504961 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	193
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	111, 42
Conread position:	100-468
Cow position:	chr1:7143116-7142751 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	248
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	112, 185
Conread position:	103-575
Cow position:	chr1:19482338-19481891 (view UCSC Genome Browser custom track)
Alignm length:	476
Alignm identity:	346
Alignm E-value:	0
Alignm gaps (pig, cow):	42, 176
Conread position:	104-287
Cow position:	chr1:40292225-40292047 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	134
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	11, 0
Conread position:	104-302
Cow position:	chr1:74013530-74013322 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	156
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	112, 0
Conread position:	105-568
Cow position:	chr1:16767347-16766884 (view UCSC Genome Browser custom track)
Alignm length:	473
Alignm identity:	324
Alignm E-value:	0
Alignm gaps (pig, cow):	104, 160
Conread position:	106-276
Cow position:	chr1:24561712-24561538 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	130
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	103, 36
Conread position:	106-439
Cow position:	chr1:53595064-53595391 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	233
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	110, 122
Conread position:	106-561
Cow position:	chr1:46693917-46693456 (view UCSC Genome Browser custom track)
Alignm length:	473
Alignm identity:	318
Alignm E-value:	0
Alignm gaps (pig, cow):	110, 61
Conread position:	106-571
Cow position:	chr1:24133316-24132858 (view UCSC Genome Browser custom track)
Alignm length:	469
Alignm identity:	349
Alignm E-value:	0
Alignm gaps (pig, cow):	123, 36
Conread position:	106-574
Cow position:	chr1:79165353-79164874 (view UCSC Genome Browser custom track)
Alignm length:	484
Alignm identity:	344
Alignm E-value:	0
Alignm gaps (pig, cow):	39, 239
Conread position:	106-584
Cow position:	chr1:47658094-47658565 (view UCSC Genome Browser custom track)
Alignm length:	485
Alignm identity:	320
Alignm E-value:	0
Alignm gaps (pig, cow):	214, 36
Conread position:	107-337
Cow position:	chr1:6795196-6794953 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	174
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	50, 171
Conread position:	107-348
Cow position:	chr1:64099523-64099282 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	164
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	104, 35
Conread position:	107-498
Cow position:	chr1:48731088-48730700 (view UCSC Genome Browser custom track)
Alignm length:	401
Alignm identity:	276
Alignm E-value:	0
Alignm gaps (pig, cow):	100, 59
Conread position:	108-439
Cow position:	chr1:81673805-81674139 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	221
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	84, 202
Conread position:	108-492
Cow position:	chr1:37887049-37886689 (view UCSC Genome Browser custom track)
Alignm length:	389
Alignm identity:	267
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	8, 124