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Cow genome map

           
Conread name:
           
Ss1.1-rste21_g17.5
        

               
Conread position:
               
31-357
               

               
Cow position:
               
chr13:9549018-9548700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 103
               

               
Conread position:
               
90-581
               

               
Cow position:
               
chr13:21287821-21288307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 142
               

               
Conread position:
               
91-574
               

               
Cow position:
               
chr13:23667531-23667041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
97-260
               

               
Cow position:
               
chr13:34299383-34299538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr13:13266060-13265781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
102-442
               

               
Cow position:
               
chr13:47863440-47863786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 202
               

               
Conread position:
               
106-347
               

               
Cow position:
               
chr13:55843737-55843488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
106-498
               

               
Cow position:
               
chr13:9265565-9265964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 219
               

               
Conread position:
               
106-582
               

               
Cow position:
               
chr13:12670192-12670678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
107-574
               

               
Cow position:
               
chr13:24715489-24715033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
108-482
               

               
Cow position:
               
chr13:31511818-31512195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
118, 220
               

               
Conread position:
               
109-259
               

               
Cow position:
               
chr13:265395-265238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
109-282
               

               
Cow position:
               
chr13:48629240-48629068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
148, 108
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr13:27017139-27017315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
109-295
               

               
Cow position:
               
chr13:60436633-60436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr13:15162419-15162604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 35
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr13:11794958-11794743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
109-318
               

               
Cow position:
               
chr13:38485080-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
109-322
               

               
Cow position:
               
chr13:2113935-2113716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr13:6606770-6607002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
109-340
               

               
Cow position:
               
chr13:41359999-41359761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 159
               

               
Conread position:
               
109-341
               

               
Cow position:
               
chr13:52010336-52010564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr13:37497508-37497737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
109-347
               

               
Cow position:
               
chr13:52879660-52879418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
109-348
               

               
Cow position:
               
chr13:14227177-14226938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
222, 161
               

               
Conread position:
               
109-352
               

               
Cow position:
               
chr13:3003697-3003448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
105, 231
               

               
Conread position:
               
109-352
               

               
Cow position:
               
chr13:7010719-7010473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
109-353
               

               
Cow position:
               
chr13:9350270-9350023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 222
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr13:5498064-5497816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 221
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr13:36937446-36937688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 190
               

               
Conread position:
               
109-384
               

               
Cow position:
               
chr13:47313153-47312892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
221, 32
               

               
Conread position:
               
109-437
               

               
Cow position:
               
chr13:15281029-15281362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
118, 223
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr13:54063104-54063435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr13:14717087-14717427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
109-448
               

               
Cow position:
               
chr13:36771172-36771511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr13:6153529-6153877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 247
               

               
Conread position:
               
109-454
               

               
Cow position:
               
chr13:38277887-38278244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 120
               

               
Conread position:
               
109-459
               

               
Cow position:
               
chr13:17622534-17622187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 82
               

               
Conread position:
               
109-471
               

               
Cow position:
               
chr13:15167068-15166705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
109-492
               

               
Cow position:
               
chr13:11820827-11820465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 21
               

               
Conread position:
               
109-504
               

               
Cow position:
               
chr13:50690142-50690543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 234
               

               
Conread position:
               
109-504
               

               
Cow position:
               
chr13:51940979-51940588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 33
               

               
Conread position:
               
109-526
               

               
Cow position:
               
chr13:32949753-32950159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 193
               

               
Conread position:
               
109-535
               

               
Cow position:
               
chr13:20666138-20666563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
109-545
               

               
Cow position:
               
chr13:58043878-58043438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
109-547
               

               
Cow position:
               
chr13:31808762-31808336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
109-555
               

               
Cow position:
               
chr13:44626630-44626168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 202
               

               
Conread position:
               
109-556
               

               
Cow position:
               
chr13:6086651-6087094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
109-563
               

               
Cow position:
               
chr13:19610328-19610769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
109-567
               

               
Cow position:
               
chr13:44202239-44201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 117
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr13:5169387-5168919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 325
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr13:9142532-9142061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr13:34281930-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 234
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr13:44278604-44278130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 205
               

               
Conread position:
               
110-270
               

               
Cow position:
               
chr13:21670612-21670449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
112-257
               

               
Cow position:
               
chr13:19119245-19119098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
112-303
               

               
Cow position:
               
chr13:29671194-29671388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr13:10859716-10859914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 72
               

               
Conread position:
               
112-348
               

               
Cow position:
               
chr13:17886748-17886517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
112-439
               

               
Cow position:
               
chr13:13306353-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 252
               

               
Conread position:
               
112-459
               

               
Cow position:
               
chr13:47356877-47356550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
112-498
               

               
Cow position:
               
chr13:2414272-2413891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
112-501
               

               
Cow position:
               
chr13:23856462-23856070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
112-576
               

               
Cow position:
               
chr13:47007491-47007930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 30
               

               
Conread position:
               
113-214
               

               
Cow position:
               
chr13:9900549-9900447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
113-218
               

               
Cow position:
               
chr13:24729194-24729090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
113-224
               

               
Cow position:
               
chr13:6969314-6969425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-233
               

               
Cow position:
               
chr13:51901858-51901737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
113-234
               

               
Cow position:
               
chr13:5910470-5910592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
113-248
               

               
Cow position:
               
chr13:22732132-22732269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
113-254
               

               
Cow position:
               
chr13:14576912-14576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
113-257
               

               
Cow position:
               
chr13:21988856-21989006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
113-257
               

               
Cow position:
               
chr13:62018846-62018995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
113-260
               

               
Cow position:
               
chr13:48378326-48378480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
113-273
               

               
Cow position:
               
chr13:15591887-15592048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr13:12606008-12606197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr13:20570972-20570780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr13:4038126-4037926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr13:6664383-6664166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr13:17994172-17993958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr13:24539741-24539519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-335
               

               
Cow position:
               
chr13:16270181-16269945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr13:30794067-30793834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr13:34113282-34113514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
113-339
               

               
Cow position:
               
chr13:23460391-23460619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr13:3144591-3144355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr13:15349024-15349242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
219, 76
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr13:15740312-15740078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr13:54080558-54080799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr13:14544368-14544128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr13:58320519-58320293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr13:8824510-8824278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr13:25248898-25249149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr13:1636247-1636014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr13:7415792-7416036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
113-357
               

               
Cow position:
               
chr13:13563706-13563951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
113-357
               

               
Cow position:
               
chr13:34670095-34669846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
113-360
               

               
Cow position:
               
chr13:61954984-61955238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
113-364
               

               
Cow position:
               
chr13:19426452-19426703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 238
               

               
Conread position:
               
113-364
               

               
Cow position:
               
chr13:52097869-52097613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 242
               

               
Conread position:
               
113-367
               

               
Cow position:
               
chr13:33517678-33517934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr13:7257647-7257387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
110, 174
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr13:21155243-21155509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
102, 232
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr13:16155472-16155730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
113-381
               

               
Cow position:
               
chr13:24060105-24060358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr13:18215675-18215419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr13:55295380-55295648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr13:19178522-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr13:37521134-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 231
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr13:1590410-1590081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 272
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr13:36396922-36397258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr13:40652179-40651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 170
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr13:43151353-43151019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 220
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr13:25062656-25062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 199
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr13:34941411-34941740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
113-452
               

               
Cow position:
               
chr13:19138683-19138345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
111, 187
               

               
Conread position:
               
113-458
               

               
Cow position:
               
chr13:40657548-40657894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 172
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr13:8201239-8201584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr13:23166851-23167202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
113-487
               

               
Cow position:
               
chr13:25434883-25435252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
233, 101
               

               
Conread position:
               
113-487
               

               
Cow position:
               
chr13:54095050-54094681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
218, 31
               

               
Conread position:
               
113-492
               

               
Cow position:
               
chr13:11460869-11460498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
113-493
               

               
Cow position:
               
chr13:10928744-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr13:20563244-20562855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 280
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr13:37382057-37381661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 242
               

               
Conread position:
               
113-503
               

               
Cow position:
               
chr13:37981509-37981889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
113-504
               

               
Cow position:
               
chr13:17800318-17799931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
113-504
               

               
Cow position:
               
chr13:60974321-60973936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
113-511
               

               
Cow position:
               
chr13:12546661-12547059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
113-533
               

               
Cow position:
               
chr13:12408038-12408470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
113-544
               

               
Cow position:
               
chr13:1155462-1155893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 167
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr13:34035614-34035183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 203
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr13:61047452-61047020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
113-552
               

               
Cow position:
               
chr13:54381689-54382118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr13:52284155-52283712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 149
               

               
Conread position:
               
113-562
               

               
Cow position:
               
chr13:15446292-15445845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
113-563
               

               
Cow position:
               
chr13:971652-972102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 109
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr13:6616502-6616972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr13:6974411-6973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr13:25927038-25926579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 200
               

               
Conread position:
               
113-568
               

               
Cow position:
               
chr13:27525016-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
113-568
               

               
Cow position:
               
chr13:60967010-60966569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 91
               

               
Conread position:
               
113-569
               

               
Cow position:
               
chr13:20784834-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 170
               

               
Conread position:
               
113-570
               

               
Cow position:
               
chr13:1231894-1231430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
113-570
               

               
Cow position:
               
chr13:24754130-24753681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 202
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:12574880-12574415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
98, 177
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:12875739-12876189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:13089269-13088819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:15234156-15233733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:20537829-20537402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
339, 105
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:21235439-21235881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 166
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:22085511-22085945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:26261548-26262005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 226
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:30798967-30798497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:35659999-35659541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 234
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:52894388-52893935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr13:60599696-60600149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 113
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr13:4553045-4552610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr13:17291885-17292344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr13:25817759-25817313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 98
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr13:35525968-35526410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr13:20270970-20271450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr13:23960560-23961024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
113-576
               

               
Cow position:
               
chr13:60508870-60509342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
113-577
               

               
Cow position:
               
chr13:26479968-26480421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
113-577
               

               
Cow position:
               
chr13:54702436-54701961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
113-578
               

               
Cow position:
               
chr13:17821014-17821479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr13:30651421-30650965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr13:34508122-34507673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 173
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr13:38562190-38561704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:1170714-1170230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:15041226-15041702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 234
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:15872695-15872210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 272
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:17021474-17021950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 234
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:18989951-18989498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:20893396-20893869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:32017277-32017744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:37069595-37069115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 208
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr13:44323149-44322666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 189
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr13:609596-610088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 219
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr13:25537887-25537410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 389
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr13:33256742-33256270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 144
               

               
Conread position:
               
113-586
               

               
Cow position:
               
chr13:10988828-10989302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
113-586
               

               
Cow position:
               
chr13:18166976-18166506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 111
               

               
Conread position:
               
114-500
               

               
Cow position:
               
chr13:38872727-38873084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
271, 97
               

               
Conread position:
               
114-533
               

               
Cow position:
               
chr13:8202640-8203045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
114-576
               

               
Cow position:
               
chr13:12990090-12989643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
115-347
               

               
Cow position:
               
chr13:20561344-20561115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 162
               

               
Conread position:
               
115-487
               

               
Cow position:
               
chr13:43194419-43194040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 184
               

               
Conread position:
               
115-493
               

               
Cow position:
               
chr13:20705959-20706338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
115-554
               

               
Cow position:
               
chr13:52637526-52637101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 146
               

               
Conread position:
               
115-585
               

               
Cow position:
               
chr13:15288682-15289144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
116-221
               

               
Cow position:
               
chr13:57227951-57227846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-235
               

               
Cow position:
               
chr13:32826164-32826284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-266
               

               
Cow position:
               
chr13:46329221-46329376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr13:8779637-8779481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
116-273
               

               
Cow position:
               
chr13:21524668-21524509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
116-276
               

               
Cow position:
               
chr13:13344197-13344034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
116-278
               

               
Cow position:
               
chr13:36264207-36264044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
96, 151
               

               
Conread position:
               
116-301
               

               
Cow position:
               
chr13:32151809-32151621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
116-304
               

               
Cow position:
               
chr13:6621355-6621544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 147
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr13:9246957-9246765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
158, 102
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr13:21402552-21402751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 168
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr13:22195846-22195637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
116-325
               

               
Cow position:
               
chr13:14815897-14815681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr13:24931073-24930842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr13:57786480-57786710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr13:27027526-27027757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
116-341
               

               
Cow position:
               
chr13:1839623-1839398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr13:24776534-24776292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr13:1767010-1766781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr13:5752180-5752416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr13:6945616-6945378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr13:50610325-50610557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 186
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr13:24373647-24373420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr13:6759547-6759785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr13:12233213-12233444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr13:18351083-18350846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr13:38898010-38898235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
116-350
               

               
Cow position:
               
chr13:60645839-60645597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr13:9125916-9125670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr13:24155783-24155547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr13:37516893-37517131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr13:18534191-18534431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr13:52178341-52178113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:645672-645915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 218
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:1346417-1346173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 219
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:13330293-13330531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 229
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:19639184-19639429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:38089810-38090051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 232
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:43106768-43106525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 216
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:49283100-49283347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr13:52433388-52433627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 186
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr13:32717628-32717873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
116-358
               

               
Cow position:
               
chr13:61547761-61548002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
116-360
               

               
Cow position:
               
chr13:47037846-47037595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 241
               

               
Conread position:
               
116-363
               

               
Cow position:
               
chr13:22115946-22115699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr13:9302131-9302385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr13:9537982-9538228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 103
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr13:51332098-51331848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
116-367
               

               
Cow position:
               
chr13:15172164-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
116-368
               

               
Cow position:
               
chr13:47216010-47216266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
116-373
               

               
Cow position:
               
chr13:1011575-1011317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 190
               

               
Conread position:
               
116-374
               

               
Cow position:
               
chr13:22775069-22775313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
211, 26
               

               
Conread position:
               
116-381
               

               
Cow position:
               
chr13:20863778-20864038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr13:52922331-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
116-410
               

               
Cow position:
               
chr13:20440360-20440633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
269, 38
               

               
Conread position:
               
116-415
               

               
Cow position:
               
chr13:60487213-60487517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 236
               

               
Conread position:
               
116-416
               

               
Cow position:
               
chr13:30693944-30693656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 99
               

               
Conread position:
               
116-422
               

               
Cow position:
               
chr13:16024831-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
116-430
               

               
Cow position:
               
chr13:24376733-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 168
               

               
Conread position:
               
116-437
               

               
Cow position:
               
chr13:33162966-33163292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:995826-996150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 206
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:3356567-3356895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:4945147-4945475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:8635823-8635495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:15920717-15920382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 223
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:17568442-17568770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:28140296-28140624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:47073897-47074226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 211
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr13:55371918-55372246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
116-443
               

               
Cow position:
               
chr13:889936-890254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
116-443
               

               
Cow position:
               
chr13:61166214-61166535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr13:9665318-9664971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 180
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr13:29631095-29630767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr13:46284374-46284698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr13:49848160-49847833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr13:33631363-33631037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 145
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr13:20816556-20816227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr13:7663186-7663523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr13:8524378-8524719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr13:36352728-36353058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr13:60429836-60430179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
116-460
               

               
Cow position:
               
chr13:18244099-18243760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 95
               

               
Conread position:
               
116-473
               

               
Cow position:
               
chr13:8838751-8839105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
100, 183
               

               
Conread position:
               
116-486
               

               
Cow position:
               
chr13:23269970-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
116-486
               

               
Cow position:
               
chr13:37484027-37484408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 196
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr13:52285058-52284686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
116-493
               

               
Cow position:
               
chr13:43762410-43762036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
116-497
               

               
Cow position:
               
chr13:53566839-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
116-498
               

               
Cow position:
               
chr13:12926033-12925639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-498
               

               
Cow position:
               
chr13:52585778-52586178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
116-511
               

               
Cow position:
               
chr13:18835429-18835047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 95
               

               
Conread position:
               
116-511
               

               
Cow position:
               
chr13:58719280-58719673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
140, 99
               

               
Conread position:
               
116-542
               

               
Cow position:
               
chr13:21176081-21176498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
116-548
               

               
Cow position:
               
chr13:20605876-20606311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 166
               

               
Conread position:
               
116-551
               

               
Cow position:
               
chr13:20814037-20814467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr13:11808785-11808382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 38
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr13:33352124-33352564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr13:57493941-57494372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-561
               

               
Cow position:
               
chr13:21708424-21708001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 146
               

               
Conread position:
               
116-567
               

               
Cow position:
               
chr13:4664618-4665059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
116-567
               

               
Cow position:
               
chr13:34995083-34995521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 167
               

               
Conread position:
               
116-569
               

               
Cow position:
               
chr13:5278945-5279420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
116-570
               

               
Cow position:
               
chr13:45022965-45023435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:9587341-9587795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:17855617-17855154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 148
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:19023596-19024065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 173
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:19364487-19364031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 169
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:19882793-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:20879592-20880038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:57769780-57770196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr13:61976722-61977171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr13:3315430-3315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr13:17158623-17159098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 239
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr13:20880683-20881137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr13:41807018-41806560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr13:46516308-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-575
               

               
Cow position:
               
chr13:51528203-51528655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 165
               

               
Conread position:
               
116-576
               

               
Cow position:
               
chr13:13501379-13501830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
116-576
               

               
Cow position:
               
chr13:45353285-45352810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
116-578
               

               
Cow position:
               
chr13:42860327-42860786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 148
               

               
Conread position:
               
116-579
               

               
Cow position:
               
chr13:53574200-53573758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
116-579
               

               
Cow position:
               
chr13:54418475-54418000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr13:14063285-14063744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr13:21107367-21106921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr13:33900682-33901117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr13:6079176-6079630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 218
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr13:17970792-17971265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 26
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr13:20174982-20174513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr13:55673962-55674434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 211
               

               
Conread position:
               
116-585
               

               
Cow position:
               
chr13:26098385-26097954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
116-586
               

               
Cow position:
               
chr13:8362503-8362974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr13:20683188-20682982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr13:27018856-27018646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
117-574
               

               
Cow position:
               
chr13:37617566-37617096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 228
               

               
Conread position:
               
117-579
               

               
Cow position:
               
chr13:15958863-15958401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 228
               

               
Conread position:
               
117-580
               

               
Cow position:
               
chr13:20466053-20466490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
164, 29
               

               
Conread position:
               
118-292
               

               
Cow position:
               
chr13:27985188-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
118-328
               

               
Cow position:
               
chr13:55406424-55406626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
118-347
               

               
Cow position:
               
chr13:2339670-2339442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
118-504
               

               
Cow position:
               
chr13:50681568-50681957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
118-570
               

               
Cow position:
               
chr13:311671-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 234
               

               
Conread position:
               
119-239
               

               
Cow position:
               
chr13:21135492-21135607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
119-246
               

               
Cow position:
               
chr13:11202493-11202359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
119-257
               

               
Cow position:
               
chr13:25453410-25453266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
119-291
               

               
Cow position:
               
chr13:19262038-19261875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
134, 82
               

               
Conread position:
               
119-301
               

               
Cow position:
               
chr13:15624852-15624663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr13:20834617-20834812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr13:46298398-46298606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr13:51856397-51856613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr13:8473215-8473004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr13:52440427-52440221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
119-334
               

               
Cow position:
               
chr13:5658491-5658703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr13:34333712-34333917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr13:17612818-17612592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr13:46311796-46312006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr13:22886752-22886983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
119-345
               

               
Cow position:
               
chr13:32773602-32773368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 101
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr13:54331259-54331028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 183
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr13:30468368-30468136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 178
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr13:9107815-9107600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
211, 19
               

               
Conread position:
               
119-383
               

               
Cow position:
               
chr13:5091421-5091693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 260
               

               
Conread position:
               
119-384
               

               
Cow position:
               
chr13:25261567-25261837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 171
               

               
Conread position:
               
119-384
               

               
Cow position:
               
chr13:38012601-38012335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 208
               

               
Conread position:
               
119-389
               

               
Cow position:
               
chr13:32316910-32316640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
119-390
               

               
Cow position:
               
chr13:5713534-5713271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
266, 108
               

               
Conread position:
               
119-391
               

               
Cow position:
               
chr13:20041717-20042003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 205
               

               
Conread position:
               
119-415
               

               
Cow position:
               
chr13:30510301-30509999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr13:33332589-33332275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 178
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr13:53536066-53536392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr13:1959249-1958918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr13:17613586-17613250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr13:20180637-20180324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
119-453
               

               
Cow position:
               
chr13:12614500-12614158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 212
               

               
Conread position:
               
119-471
               

               
Cow position:
               
chr13:15884774-15885135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
119-491
               

               
Cow position:
               
chr13:31814107-31813742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
119-493
               

               
Cow position:
               
chr13:13176889-13176514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
119-493
               

               
Cow position:
               
chr13:40722470-40722840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
119-498
               

               
Cow position:
               
chr13:40943483-40943103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
119-504
               

               
Cow position:
               
chr13:28683598-28683214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
119-504
               

               
Cow position:
               
chr13:45604178-45604564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 166
               

               
Conread position:
               
119-533
               

               
Cow position:
               
chr13:47756615-47756184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 232
               

               
Conread position:
               
119-535
               

               
Cow position:
               
chr13:23479269-23478851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
119-562
               

               
Cow position:
               
chr13:15974850-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 92
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr13:8195322-8194883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 164
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr13:10924666-10925136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr13:42114261-42113802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 237
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr13:43138989-43139412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
119-572
               

               
Cow position:
               
chr13:37985511-37985962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr13:15622047-15621593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
119-575
               

               
Cow position:
               
chr13:52057781-52057342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
119-576
               

               
Cow position:
               
chr13:2884293-2883840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
119-578
               

               
Cow position:
               
chr13:16015047-16014583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
119-578
               

               
Cow position:
               
chr13:46525203-46525649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr13:17114140-17114602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr13:25695528-25695989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 212
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr13:33875902-33875452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 141
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr13:7076496-7076016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 175
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr13:38283744-38284197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 167
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr13:43594876-43595330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
119-585
               

               
Cow position:
               
chr13:16247893-16247419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
120-230
               

               
Cow position:
               
chr13:55947643-55947755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
120-237
               

               
Cow position:
               
chr13:12480558-12480678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
120-272
               

               
Cow position:
               
chr13:12244777-12244933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
120-334
               

               
Cow position:
               
chr13:36948931-36949149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 183
               

               
Conread position:
               
120-336
               

               
Cow position:
               
chr13:5175808-5175583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
120-338
               

               
Cow position:
               
chr13:48251753-48251968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr13:3970391-3970623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr13:24280487-24280259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr13:61170477-61170712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
120-352
               

               
Cow position:
               
chr13:8607280-8607514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
120-384
               

               
Cow position:
               
chr13:12682302-12682571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
120-389
               

               
Cow position:
               
chr13:3701671-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
120-439
               

               
Cow position:
               
chr13:34346054-34346375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 209
               

               
Conread position:
               
120-488
               

               
Cow position:
               
chr13:16343925-16343564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
120-492
               

               
Cow position:
               
chr13:48037859-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 83
               

               
Conread position:
               
120-513
               

               
Cow position:
               
chr13:56148778-56148366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
120-513
               

               
Cow position:
               
chr13:56160189-56160601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
120-563
               

               
Cow position:
               
chr13:11260491-11260072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
120-571
               

               
Cow position:
               
chr13:20820602-20821050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 22
               

               
Conread position:
               
120-572
               

               
Cow position:
               
chr13:38329869-38329404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 377
               

               
Conread position:
               
120-574
               

               
Cow position:
               
chr13:13261247-13260775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 300
               

               
Conread position:
               
120-574
               

               
Cow position:
               
chr13:56686666-56686227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 83
               

               
Conread position:
               
120-576
               

               
Cow position:
               
chr13:20683884-20684350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
120-582
               

               
Cow position:
               
chr13:17977567-17977118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
265, 25
               

               
Conread position:
               
121-254
               

               
Cow position:
               
chr13:53012148-53012283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
121-306
               

               
Cow position:
               
chr13:26423796-26423988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
121-319
               

               
Cow position:
               
chr13:39952175-39952379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
121-329
               

               
Cow position:
               
chr13:46501542-46501329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
121-346
               

               
Cow position:
               
chr13:23199446-23199213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
121-357
               

               
Cow position:
               
chr13:42839301-42839541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr13:29122604-29122831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
121-383
               

               
Cow position:
               
chr13:34052363-34052613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
121-405
               

               
Cow position:
               
chr13:41154808-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
263, 70
               

               
Conread position:
               
121-441
               

               
Cow position:
               
chr13:6835575-6835878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
209, 21
               

               
Conread position:
               
121-442
               

               
Cow position:
               
chr13:26382993-26383319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 234
               

               
Conread position:
               
121-448
               

               
Cow position:
               
chr13:10932790-10932461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 164
               

               
Conread position:
               
121-454
               

               
Cow position:
               
chr13:1042718-1043065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
121-512
               

               
Cow position:
               
chr13:56154923-56155305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
121-566
               

               
Cow position:
               
chr13:15869357-15868901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
121-567
               

               
Cow position:
               
chr13:12977800-12977369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
121-567
               

               
Cow position:
               
chr13:24586285-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 169
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr13:12448752-12449194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
121-575
               

               
Cow position:
               
chr13:42200856-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
121-576
               

               
Cow position:
               
chr13:21276093-21275639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
122-301
               

               
Cow position:
               
chr13:11290583-11290765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
122-315
               

               
Cow position:
               
chr13:14927477-14927277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
122-329
               

               
Cow position:
               
chr13:19555989-19555786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
122-337
               

               
Cow position:
               
chr13:26697867-26698086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
122-348
               

               
Cow position:
               
chr13:52969484-52969716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
107, 228
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr13:43184635-43185021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
122-522
               

               
Cow position:
               
chr13:46324551-46324951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
122-533
               

               
Cow position:
               
chr13:25547356-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
343, 89
               

               
Conread position:
               
122-574
               

               
Cow position:
               
chr13:12283072-12282621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
123-384
               

               
Cow position:
               
chr13:52199323-52199061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 5
               

               
Conread position:
               
123-439
               

               
Cow position:
               
chr13:52197876-52197561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
123-447
               

               
Cow position:
               
chr13:11767806-11768133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
124-324
               

               
Cow position:
               
chr13:23444575-23444782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
124-400
               

               
Cow position:
               
chr13:30026348-30026067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
124-439
               

               
Cow position:
               
chr13:14301453-14301133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
100, 207
               

               
Conread position:
               
124-557
               

               
Cow position:
               
chr13:24369820-24369386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
125-300
               

               
Cow position:
               
chr13:35533061-35532889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 5
               

               
Conread position:
               
125-431
               

               
Cow position:
               
chr13:29814775-29814466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
125-448
               

               
Cow position:
               
chr13:46736435-46736125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
125-477
               

               
Cow position:
               
chr13:3015934-3016292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
125-503
               

               
Cow position:
               
chr13:55315955-55316344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
125-570
               

               
Cow position:
               
chr13:34263139-34263586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 91
               

               
Conread position:
               
125-571
               

               
Cow position:
               
chr13:9974833-9975281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 242
               

               
Conread position:
               
125-571
               

               
Cow position:
               
chr13:20378104-20378530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
127-256
               

               
Cow position:
               
chr13:19320981-19320852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
127-264
               

               
Cow position:
               
chr13:47675178-47675315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
127-326
               

               
Cow position:
               
chr13:9891930-9891728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr13:2462999-2463213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
127-338
               

               
Cow position:
               
chr13:34556100-34556318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-347
               

               
Cow position:
               
chr13:18551680-18551454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
127-355
               

               
Cow position:
               
chr13:14215236-14215008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
127-360
               

               
Cow position:
               
chr13:17816003-17815767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 220
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr13:2800747-2800990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 204
               

               
Conread position:
               
127-383
               

               
Cow position:
               
chr13:54093972-54093721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr13:46636899-46637206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
127-451
               

               
Cow position:
               
chr13:45726111-45725799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
127-545
               

               
Cow position:
               
chr13:47963969-47964360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 61
               

               
Conread position:
               
127-567
               

               
Cow position:
               
chr13:19393519-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 135
               

               
Conread position:
               
127-570
               

               
Cow position:
               
chr13:34728607-34729053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
127-571
               

               
Cow position:
               
chr13:16292778-16292324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
127-571
               

               
Cow position:
               
chr13:32283359-32282913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
127-585
               

               
Cow position:
               
chr13:6189398-6189827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
128-268
               

               
Cow position:
               
chr13:17762842-17762980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
128-338
               

               
Cow position:
               
chr13:51108720-51108507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
128-341
               

               
Cow position:
               
chr13:9884999-9884783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
128-353
               

               
Cow position:
               
chr13:21210093-21209863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 168
               

               
Conread position:
               
128-439
               

               
Cow position:
               
chr13:18329362-18329045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
128-446
               

               
Cow position:
               
chr13:32657575-32657888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
128-451
               

               
Cow position:
               
chr13:11954883-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 14
               

               
Conread position:
               
128-459
               

               
Cow position:
               
chr13:6060777-6061109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
128-557
               

               
Cow position:
               
chr13:49805205-49804789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
128-563
               

               
Cow position:
               
chr13:59687646-59688068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 214
               

               
Conread position:
               
128-570
               

               
Cow position:
               
chr13:21241861-21242288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 159
               

               
Conread position:
               
128-571
               

               
Cow position:
               
chr13:19033778-19033342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
128-576
               

               
Cow position:
               
chr13:12045104-12045563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
128-579
               

               
Cow position:
               
chr13:20497883-20497421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr13:43629546-43629767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr13:50823326-50823542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
129-501
               

               
Cow position:
               
chr13:8609318-8609688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
129-560
               

               
Cow position:
               
chr13:12207273-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 208
               

               
Conread position:
               
129-584
               

               
Cow position:
               
chr13:57002962-57002497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 215
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr13:43119541-43119321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 188
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr13:39948190-39948413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
130-439
               

               
Cow position:
               
chr13:20649754-20650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr13:46458851-46458540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
130-448
               

               
Cow position:
               
chr13:6178116-6178437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 208
               

               
Conread position:
               
130-450
               

               
Cow position:
               
chr13:11096401-11096087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
130-571
               

               
Cow position:
               
chr13:13339091-13338645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
130-571
               

               
Cow position:
               
chr13:43480290-43479849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 212
               

               
Conread position:
               
131-282
               

               
Cow position:
               
chr13:6857011-6857157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr13:23816523-23816738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr13:54237574-54237362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
131-353
               

               
Cow position:
               
chr13:54345005-54344773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
132-305
               

               
Cow position:
               
chr13:57323681-57323506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr13:37947784-37947954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
132-324
               

               
Cow position:
               
chr13:42690248-42690050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
132-334
               

               
Cow position:
               
chr13:37980420-37980615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr13:35718907-35719126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
132-348
               

               
Cow position:
               
chr13:20536727-20536511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
132-410
               

               
Cow position:
               
chr13:1780060-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 228
               

               
Conread position:
               
132-420
               

               
Cow position:
               
chr13:37945989-37946266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
132-443
               

               
Cow position:
               
chr13:46182014-46181707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr13:25531561-25531886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 254
               

               
Conread position:
               
132-498
               

               
Cow position:
               
chr13:17439539-17439906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 217
               

               
Conread position:
               
132-499
               

               
Cow position:
               
chr13:42229554-42229174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
132-503
               

               
Cow position:
               
chr13:11061214-11060842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
132-571
               

               
Cow position:
               
chr13:2774352-2773902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
132-571
               

               
Cow position:
               
chr13:34261459-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 204
               

               
Conread position:
               
132-580
               

               
Cow position:
               
chr13:9906970-9906506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 214
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr13:17347034-17346811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 196
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr13:18852302-18851872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 94
               

               
Conread position:
               
133-579
               

               
Cow position:
               
chr13:36877298-36876844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 356
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr13:33054170-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
134-354
               

               
Cow position:
               
chr13:20530918-20531144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr13:37775000-37775419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
134-584
               

               
Cow position:
               
chr13:15192669-15193114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 80
               

               
Conread position:
               
135-289
               

               
Cow position:
               
chr13:43812307-43812147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
135-289
               

               
Cow position:
               
chr13:43839322-43839482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr13:53308722-53308513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
77, 180
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr13:48944885-48944690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
135-439
               

               
Cow position:
               
chr13:30665689-30665996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
135-446
               

               
Cow position:
               
chr13:4464231-4463924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
135-571
               

               
Cow position:
               
chr13:41918938-41919374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
135-574
               

               
Cow position:
               
chr13:20839792-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 208
               

               
Conread position:
               
135-586
               

               
Cow position:
               
chr13:37818536-37818974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
136-319
               

               
Cow position:
               
chr13:60393475-60393663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
136-345
               

               
Cow position:
               
chr13:17443538-17443322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 198
               

               
Conread position:
               
136-353
               

               
Cow position:
               
chr13:6975567-6975789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
136-383
               

               
Cow position:
               
chr13:2192931-2192688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 92
               

               
Conread position:
               
136-434
               

               
Cow position:
               
chr13:21039375-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
136-495
               

               
Cow position:
               
chr13:12202587-12202223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 6
               

               
Conread position:
               
136-571
               

               
Cow position:
               
chr13:7059698-7059245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 340
               

               
Conread position:
               
137-439
               

               
Cow position:
               
chr13:14222169-14222474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
80, 200
               

               
Conread position:
               
137-448
               

               
Cow position:
               
chr13:43868896-43869203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
137-552
               

               
Cow position:
               
chr13:51014958-51015378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 200
               

               
Conread position:
               
137-567
               

               
Cow position:
               
chr13:10845815-10845409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
137-574
               

               
Cow position:
               
chr13:18170364-18170831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
137-581
               

               
Cow position:
               
chr13:45073713-45074125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
197, 64
               

               
Conread position:
               
138-257
               

               
Cow position:
               
chr13:59962-60084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
138-323
               

               
Cow position:
               
chr13:22025479-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
138-341
               

               
Cow position:
               
chr13:60690501-60690712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr13:37795655-37795448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr13:58389238-58389029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
138-380
               

               
Cow position:
               
chr13:562917-563164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
64, 218
               

               
Conread position:
               
138-441
               

               
Cow position:
               
chr13:60329971-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
138-459
               

               
Cow position:
               
chr13:9643663-9643988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
138-488
               

               
Cow position:
               
chr13:20679566-20679209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
138-498
               

               
Cow position:
               
chr13:51821671-51822012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
138-506
               

               
Cow position:
               
chr13:13465569-13465914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 144
               

               
Conread position:
               
138-567
               

               
Cow position:
               
chr13:13320997-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 37
               

               
Conread position:
               
138-573
               

               
Cow position:
               
chr13:40491454-40491002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 229
               

               
Conread position:
               
138-585
               

               
Cow position:
               
chr13:5263065-5263505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
138-585
               

               
Cow position:
               
chr13:17745460-17745029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr13:11147526-11147324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr13:21904882-21904675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
122, 72
               

               
Conread position:
               
139-585
               

               
Cow position:
               
chr13:18491814-18491379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
142-505
               

               
Cow position:
               
chr13:18172557-18172191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 343
               

               
Conread position:
               
142-546
               

               
Cow position:
               
chr13:17004375-17004788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
142-571
               

               
Cow position:
               
chr13:58525139-58524729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
143-509
               

               
Cow position:
               
chr13:8245116-8245486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
143-557
               

               
Cow position:
               
chr13:37521516-37521948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 190
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr13:37804095-37803674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
143-584
               

               
Cow position:
               
chr13:19581871-19582308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 180
               

               
Conread position:
               
144-342
               

               
Cow position:
               
chr13:6894309-6894107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
144-439
               

               
Cow position:
               
chr13:20610995-20611289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
144-585
               

               
Cow position:
               
chr13:9846240-9846689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
145-526
               

               
Cow position:
               
chr13:53195078-53195450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
145-552
               

               
Cow position:
               
chr13:52227886-52228292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 192
               

               
Conread position:
               
145-569
               

               
Cow position:
               
chr13:15257164-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
146-567
               

               
Cow position:
               
chr13:19022491-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 232
               

               
Conread position:
               
147-548
               

               
Cow position:
               
chr13:60341026-60340617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
150-360
               

               
Cow position:
               
chr13:16833869-16834081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
150-585
               

               
Cow position:
               
chr13:152160-151741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 62
               

               
Conread position:
               
152-302
               

               
Cow position:
               
chr13:20597572-20597716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
153-581
               

               
Cow position:
               
chr13:46112173-46111744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
156-453
               

               
Cow position:
               
chr13:9593710-9593410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
156-577
               

               
Cow position:
               
chr13:57475214-57475635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
156-581
               

               
Cow position:
               
chr13:19223852-19223427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 194
               

               
Conread position:
               
156-581
               

               
Cow position:
               
chr13:37592735-37593169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 203
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr13:15281734-15282078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 192
               

               
Conread position:
               
158-353
               

               
Cow position:
               
chr13:4423279-4423483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
158-448
               

               
Cow position:
               
chr13:61990133-61990415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 188
               

               
Conread position:
               
158-498
               

               
Cow position:
               
chr13:547689-547357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
158-562
               

               
Cow position:
               
chr13:48598105-48597705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
158-567
               

               
Cow position:
               
chr13:59170858-59170435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
158-570
               

               
Cow position:
               
chr13:20509933-20509515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
158-579
               

               
Cow position:
               
chr13:61188736-61188308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
159-480
               

               
Cow position:
               
chr13:15528828-15529159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
159-549
               

               
Cow position:
               
chr13:24230413-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
159-577
               

               
Cow position:
               
chr13:52749288-52749681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
160-448
               

               
Cow position:
               
chr13:23512558-23512280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
160-505
               

               
Cow position:
               
chr13:26369725-26369379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr13:8652240-8652543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
163-318
               

               
Cow position:
               
chr13:56431709-56431861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 116
               

               
Conread position:
               
163-390
               

               
Cow position:
               
chr13:60286187-60285961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 174
               

               
Conread position:
               
164-557
               

               
Cow position:
               
chr13:48165234-48165622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
167-341
               

               
Cow position:
               
chr13:5079033-5079208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
168-498
               

               
Cow position:
               
chr13:21283515-21283842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
168-570
               

               
Cow position:
               
chr13:15991031-15991443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 187
               

               
Conread position:
               
168-576
               

               
Cow position:
               
chr13:7032482-7032068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
169-578
               

               
Cow position:
               
chr13:15195019-15195422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr13:27493665-27493941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
170-498
               

               
Cow position:
               
chr13:14771650-14771312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 301
               

               
Conread position:
               
172-367
               

               
Cow position:
               
chr13:11253755-11253562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
172-439
               

               
Cow position:
               
chr13:4487633-4487905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
172-442
               

               
Cow position:
               
chr13:2404930-2404670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
172-584
               

               
Cow position:
               
chr13:44003905-44003476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
172-584
               

               
Cow position:
               
chr13:55583386-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 180
               

               
Conread position:
               
174-364
               

               
Cow position:
               
chr13:51316326-51316135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
174-431
               

               
Cow position:
               
chr13:12618924-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 169
               

               
Conread position:
               
174-563
               

               
Cow position:
               
chr13:47186409-47186025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr13:5671416-5671798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 25
               

               
Conread position:
               
175-439
               

               
Cow position:
               
chr13:60879709-60879980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
175-585
               

               
Cow position:
               
chr13:6540129-6540528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr13:21189464-21189272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 180
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr13:62474616-62474824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
176-498
               

               
Cow position:
               
chr13:5082837-5082509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
176-501
               

               
Cow position:
               
chr13:11644116-11643798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr13:49503345-49503747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
178-330
               

               
Cow position:
               
chr13:966258-966104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
180-571
               

               
Cow position:
               
chr13:49824206-49823810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
181-562
               

               
Cow position:
               
chr13:17338612-17338221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
181-571
               

               
Cow position:
               
chr13:19188482-19188101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
181-574
               

               
Cow position:
               
chr13:52055418-52055809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
181-584
               

               
Cow position:
               
chr13:5758167-5758558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 48
               

               
Conread position:
               
181-584
               

               
Cow position:
               
chr13:49022692-49023092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
182-459
               

               
Cow position:
               
chr13:15110501-15110213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr13:36346147-36345976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
183-571
               

               
Cow position:
               
chr13:607085-607476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
185-374
               

               
Cow position:
               
chr13:7790189-7789992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
189-496
               

               
Cow position:
               
chr13:28689641-28689328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
189-557
               

               
Cow position:
               
chr13:13954218-13954595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
191-343
               

               
Cow position:
               
chr13:22030256-22030103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
191-423
               

               
Cow position:
               
chr13:4420515-4420277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr13:29831266-29831640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
191-585
               

               
Cow position:
               
chr13:867296-866906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr13:56842727-56842947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
194-358
               

               
Cow position:
               
chr13:20264746-20264916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr13:28652963-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
195-497
               

               
Cow position:
               
chr13:39368117-39367820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr13:30662163-30661833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
201-344
               

               
Cow position:
               
chr13:54864876-54865018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
202-478
               

               
Cow position:
               
chr13:15903171-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
207-584
               

               
Cow position:
               
chr13:11321466-11321826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
129, 161
               

               
Conread position:
               
210-584
               

               
Cow position:
               
chr13:3160538-3160176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
211-347
               

               
Cow position:
               
chr13:29958826-29958689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
211-454
               

               
Cow position:
               
chr13:52929855-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
212-347
               

               
Cow position:
               
chr13:20128810-20128672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
212-364
               

               
Cow position:
               
chr13:18942025-18941871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr13:49520677-49520906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 139
               

               
Conread position:
               
212-448
               

               
Cow position:
               
chr13:13238722-13238487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
212-460
               

               
Cow position:
               
chr13:62601150-62600905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
212-482
               

               
Cow position:
               
chr13:17966064-17966333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 124
               

               
Conread position:
               
212-500
               

               
Cow position:
               
chr13:18696987-18696699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
212-501
               

               
Cow position:
               
chr13:7488684-7488396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
212-548
               

               
Cow position:
               
chr13:1363839-1363500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
212-555
               

               
Cow position:
               
chr13:54388876-54389215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 27
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr13:8374627-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 131
               

               
Conread position:
               
212-571
               

               
Cow position:
               
chr13:6849075-6848711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
212-571
               

               
Cow position:
               
chr13:6931060-6930710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
212-571
               

               
Cow position:
               
chr13:17451239-17450879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
212-571
               

               
Cow position:
               
chr13:45594048-45593710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
212-579
               

               
Cow position:
               
chr13:18058104-18058468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
212-581
               

               
Cow position:
               
chr13:38698196-38697833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
212-584
               

               
Cow position:
               
chr13:17568954-17569323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 262
               

               
Conread position:
               
212-584
               

               
Cow position:
               
chr13:18999687-18999302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
212-584
               

               
Cow position:
               
chr13:26698352-26698720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
212-584
               

               
Cow position:
               
chr13:54583022-54582647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 219
               

               
Conread position:
               
212-586
               

               
Cow position:
               
chr13:20473546-20473902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr13:37640730-37640488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
213-570
               

               
Cow position:
               
chr13:49507705-49508043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
214-505
               

               
Cow position:
               
chr13:11381579-11381871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 90
               

               
Conread position:
               
214-571
               

               
Cow position:
               
chr13:28552739-28552373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 254
               

               
Conread position:
               
214-576
               

               
Cow position:
               
chr13:20360413-20360055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
171, 67
               

               
Conread position:
               
215-561
               

               
Cow position:
               
chr13:2823001-2822664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
215-573
               

               
Cow position:
               
chr13:20261183-20261550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
216-492
               

               
Cow position:
               
chr13:48375504-48375769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
217-571
               

               
Cow position:
               
chr13:21269440-21269794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
218-497
               

               
Cow position:
               
chr13:51115889-51116162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr13:10098853-10099049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
167, 103
               

               
Conread position:
               
220-568
               

               
Cow position:
               
chr13:20288466-20288128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 13
               

               
Conread position:
               
220-586
               

               
Cow position:
               
chr13:6663614-6663983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
221-463
               

               
Cow position:
               
chr13:62518196-62518434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
223-561
               

               
Cow position:
               
chr13:14878818-14879158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
224-430
               

               
Cow position:
               
chr13:32826321-32826529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
224-588
               

               
Cow position:
               
chr13:58763499-58763840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 56
               

               
Conread position:
               
225-384
               

               
Cow position:
               
chr13:6389512-6389356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
226-557
               

               
Cow position:
               
chr13:18929662-18929326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
227-587
               

               
Cow position:
               
chr13:25381092-25380716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
228-579
               

               
Cow position:
               
chr13:21280358-21280723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 168
               

               
Conread position:
               
229-496
               

               
Cow position:
               
chr13:15144244-15144503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
229-567
               

               
Cow position:
               
chr13:20217260-20217607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
230-557
               

               
Cow position:
               
chr13:18995256-18994923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
230-571
               

               
Cow position:
               
chr13:14576334-14576002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
232-387
               

               
Cow position:
               
chr13:626685-626529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
232-579
               

               
Cow position:
               
chr13:17437743-17438083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
234-567
               

               
Cow position:
               
chr13:1569046-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
234-571
               

               
Cow position:
               
chr13:5910773-5911104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
234-574
               

               
Cow position:
               
chr13:60375365-60375704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 167
               

               
Conread position:
               
236-470
               

               
Cow position:
               
chr13:34555711-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
238-576
               

               
Cow position:
               
chr13:15194613-15194938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 225
               

               
Conread position:
               
239-561
               

               
Cow position:
               
chr13:5060863-5060535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
239-574
               

               
Cow position:
               
chr13:27550857-27550517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
240-571
               

               
Cow position:
               
chr13:34532816-34533142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
230, 5
               

               
Conread position:
               
244-478
               

               
Cow position:
               
chr13:56678128-56677895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
244-493
               

               
Cow position:
               
chr13:8402168-8401922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr13:47322291-47322609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
245-578
               

               
Cow position:
               
chr13:21135788-21136131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 103
               

               
Conread position:
               
245-584
               

               
Cow position:
               
chr13:19279203-19278871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 13
               

               
Conread position:
               
246-492
               

               
Cow position:
               
chr13:19320646-19320398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
246-567
               

               
Cow position:
               
chr13:9924133-9924456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
247-571
               

               
Cow position:
               
chr13:14967105-14967428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
249-584
               

               
Cow position:
               
chr13:20534990-20534674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
250-448
               

               
Cow position:
               
chr13:55728006-55727812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
250-586
               

               
Cow position:
               
chr13:20155107-20154765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
252-471
               

               
Cow position:
               
chr13:8355302-8355092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
252-581
               

               
Cow position:
               
chr13:12974907-12974595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
283, 18
               

               
Conread position:
               
252-585
               

               
Cow position:
               
chr13:7265020-7265331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
254-497
               

               
Cow position:
               
chr13:47022462-47022227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
254-563
               

               
Cow position:
               
chr13:46329501-46329808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 289
               

               
Conread position:
               
254-571
               

               
Cow position:
               
chr13:10221048-10220744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
241, 27
               

               
Conread position:
               
254-574
               

               
Cow position:
               
chr13:4158766-4158441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 288
               

               
Conread position:
               
254-576
               

               
Cow position:
               
chr13:16038191-16038500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 6
               

               
Conread position:
               
254-584
               

               
Cow position:
               
chr13:54128491-54128823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 6
               

               
Conread position:
               
256-555
               

               
Cow position:
               
chr13:16714161-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
256-582
               

               
Cow position:
               
chr13:15659377-15659050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
258-584
               

               
Cow position:
               
chr13:17822855-17823180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
260-581
               

               
Cow position:
               
chr13:25978094-25978418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 204
               

               
Conread position:
               
263-498
               

               
Cow position:
               
chr13:13297768-13297541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
264-478
               

               
Cow position:
               
chr13:11397366-11397568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
264-522
               

               
Cow position:
               
chr13:50750961-50751224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
264-571
               

               
Cow position:
               
chr13:16203762-16203452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
264-584
               

               
Cow position:
               
chr13:56034766-56035083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
266-560
               

               
Cow position:
               
chr13:20137915-20137615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
266-584
               

               
Cow position:
               
chr13:52477555-52477871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
268-535
               

               
Cow position:
               
chr13:20871478-20871216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 179
               

               
Conread position:
               
269-473
               

               
Cow position:
               
chr13:48862008-48862210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 143
               

               
Conread position:
               
272-587
               

               
Cow position:
               
chr13:27181115-27180805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
216, 73
               

               
Conread position:
               
275-560
               

               
Cow position:
               
chr13:13196323-13196039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
277-587
               

               
Cow position:
               
chr13:7149308-7149008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
281-570
               

               
Cow position:
               
chr13:20868680-20868957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
284-488
               

               
Cow position:
               
chr13:9981768-9981970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 89
               

               
Conread position:
               
284-575
               

               
Cow position:
               
chr13:21170603-21170311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
287-553
               

               
Cow position:
               
chr13:19876258-19876532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
287-567
               

               
Cow position:
               
chr13:15757190-15756907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
287-579
               

               
Cow position:
               
chr13:42672352-42672653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
288-574
               

               
Cow position:
               
chr13:7149444-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
288-580
               

               
Cow position:
               
chr13:6861251-6860953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
289-471
               

               
Cow position:
               
chr13:29123373-29123191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
292-548
               

               
Cow position:
               
chr13:13211951-13211698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
293-571
               

               
Cow position:
               
chr13:20314555-20314838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
293-575
               

               
Cow position:
               
chr13:62008176-62007890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 193
               

               
Conread position:
               
293-584
               

               
Cow position:
               
chr13:15239456-15239741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
297-571
               

               
Cow position:
               
chr13:18197547-18197820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 81
               

               
Conread position:
               
297-585
               

               
Cow position:
               
chr13:11103131-11103437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr13:18181714-18181895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
298-533
               

               
Cow position:
               
chr13:16160476-16160245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
298-566
               

               
Cow position:
               
chr13:35557046-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
298-576
               

               
Cow position:
               
chr13:6889810-6889522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 268
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr13:1147091-1147368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
302-571
               

               
Cow position:
               
chr13:19007987-19007730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr13:17089470-17089743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
309-570
               

               
Cow position:
               
chr13:21171524-21171784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
309-581
               

               
Cow position:
               
chr13:17611502-17611775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 187
               

               
Conread position:
               
314-502
               

               
Cow position:
               
chr13:8478446-8478261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr13:15460731-15460930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
314-567
               

               
Cow position:
               
chr13:55494477-55494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
314-579
               

               
Cow position:
               
chr13:28440492-28440755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
321-574
               

               
Cow position:
               
chr13:38035872-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
322-584
               

               
Cow position:
               
chr13:33601195-33601454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
327-567
               

               
Cow position:
               
chr13:84612-84382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
329-560
               

               
Cow position:
               
chr13:18340563-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
329-574
               

               
Cow position:
               
chr13:57985907-57986150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr13:45439548-45439319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
333-471
               

               
Cow position:
               
chr13:47634533-47634394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
334-580
               

               
Cow position:
               
chr13:56535480-56535245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
335-501
               

               
Cow position:
               
chr13:37621337-37621498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
335-577
               

               
Cow position:
               
chr13:47243531-47243771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
336-579
               

               
Cow position:
               
chr13:15083681-15083440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
338-569
               

               
Cow position:
               
chr13:19598646-19598876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
338-571
               

               
Cow position:
               
chr13:21980955-21981183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
342-579
               

               
Cow position:
               
chr13:37614173-37614419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
343-581
               

               
Cow position:
               
chr13:14645067-14644832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
344-571
               

               
Cow position:
               
chr13:49205013-49204799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
344-584
               

               
Cow position:
               
chr13:1462282-1462516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
344-584
               

               
Cow position:
               
chr13:3209306-3209549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
344-584
               

               
Cow position:
               
chr13:11933588-11933832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
357-574
               

               
Cow position:
               
chr13:17813473-17813255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
360-574
               

               
Cow position:
               
chr13:8450329-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
361-567
               

               
Cow position:
               
chr13:16908215-16908004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
361-574
               

               
Cow position:
               
chr13:53850823-53850604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
363-567
               

               
Cow position:
               
chr13:18092879-18093078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
363-571
               

               
Cow position:
               
chr13:10210663-10210866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
363-581
               

               
Cow position:
               
chr13:42849137-42849353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
365-585
               

               
Cow position:
               
chr13:8699743-8699968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 214
               

               
Conread position:
               
372-579
               

               
Cow position:
               
chr13:49283793-49284001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
373-574
               

               
Cow position:
               
chr13:33854698-33854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
377-571
               

               
Cow position:
               
chr13:21277485-21277670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
377-574
               

               
Cow position:
               
chr13:22601713-22601902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
379-570
               

               
Cow position:
               
chr13:31507464-31507654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
379-572
               

               
Cow position:
               
chr13:52913853-52913662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 115
               

               
Conread position:
               
379-584
               

               
Cow position:
               
chr13:37554894-37555098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
382-584
               

               
Cow position:
               
chr13:22345301-22345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
383-581
               

               
Cow position:
               
chr13:51249405-51249600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
384-571
               

               
Cow position:
               
chr13:6980893-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
384-571
               

               
Cow position:
               
chr13:50646657-50646842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
384-574
               

               
Cow position:
               
chr13:6113552-6113748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
384-584
               

               
Cow position:
               
chr13:16099147-16099356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
385-576
               

               
Cow position:
               
chr13:10511728-10511923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
395-530
               

               
Cow position:
               
chr13:16790172-16790041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
395-571
               

               
Cow position:
               
chr13:24107585-24107759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
395-571
               

               
Cow position:
               
chr13:25679284-25679114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr13:5092431-5092611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 88
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr13:13265524-13265348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr13:11565800-11565622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
395-581
               

               
Cow position:
               
chr13:48127071-48126881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
395-584
               

               
Cow position:
               
chr13:17994410-17994600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
395-584
               

               
Cow position:
               
chr13:49356086-49356272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
395-585
               

               
Cow position:
               
chr13:23685036-23685232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
395-587
               

               
Cow position:
               
chr13:55775323-55775132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 44
               

               
Conread position:
               
396-566
               

               
Cow position:
               
chr13:16525261-16525436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
398-571
               

               
Cow position:
               
chr13:9707789-9707960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
399-550
               

               
Cow position:
               
chr13:1037598-1037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
399-574
               

               
Cow position:
               
chr13:21425871-21426035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
400-584
               

               
Cow position:
               
chr13:28081680-28081489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
400-585
               

               
Cow position:
               
chr13:57323104-57322922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
402-569
               

               
Cow position:
               
chr13:26395417-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
403-571
               

               
Cow position:
               
chr13:37405666-37405502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
404-584
               

               
Cow position:
               
chr13:23399720-23399543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
405-585
               

               
Cow position:
               
chr13:53619957-53619772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr13:6951529-6951367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
408-584
               

               
Cow position:
               
chr13:23823084-23823255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
413-571
               

               
Cow position:
               
chr13:27198853-27198701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
413-574
               

               
Cow position:
               
chr13:43342513-43342351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
413-584
               

               
Cow position:
               
chr13:23478847-23478674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
417-571
               

               
Cow position:
               
chr13:23795446-23795593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
418-578
               

               
Cow position:
               
chr13:47651476-47651635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chr13:25313212-25313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
422-580
               

               
Cow position:
               
chr13:4135819-4135656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
423-581
               

               
Cow position:
               
chr13:17815173-17815019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
424-585
               

               
Cow position:
               
chr13:58157123-58157283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
426-585
               

               
Cow position:
               
chr13:25924290-25924457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
432-570
               

               
Cow position:
               
chr13:62304497-62304357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
435-577
               

               
Cow position:
               
chr13:9612992-9612856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.