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Cow genome map

           
Conread name:
           
Ss1.1-rste21_g17.5
        

               
Conread position:
               
98-571
               

               
Cow position:
               
chr15:42143214-42142763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
100-340
               

               
Cow position:
               
chr15:33314084-33314328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
100-551
               

               
Cow position:
               
chr15:8962363-8961933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 154
               

               
Conread position:
               
102-486
               

               
Cow position:
               
chr15:2144772-2145162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
105-439
               

               
Cow position:
               
chr15:4642811-4643150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 226
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr15:51850595-51850820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
106-372
               

               
Cow position:
               
chr15:8978757-8978498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
106-486
               

               
Cow position:
               
chr15:41418460-41418853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 259
               

               
Conread position:
               
106-497
               

               
Cow position:
               
chr15:13554697-13554319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
107-241
               

               
Cow position:
               
chr15:38936052-38935919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
107-440
               

               
Cow position:
               
chr15:9493938-9494275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
107-586
               

               
Cow position:
               
chr15:30982274-30981830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
108-338
               

               
Cow position:
               
chr15:52154433-52154670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
108-567
               

               
Cow position:
               
chr15:26896357-26896805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
108-571
               

               
Cow position:
               
chr15:43913729-43914208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 233
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr15:33679048-33678844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr15:9624230-9624012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 187
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr15:44297413-44297189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr15:31992880-31992663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr15:9062240-9062462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
107, 178
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr15:16493034-16492797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr15:28463949-28464189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
109-350
               

               
Cow position:
               
chr15:33376454-33376701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 241
               

               
Conread position:
               
109-351
               

               
Cow position:
               
chr15:16741682-16741925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
109-351
               

               
Cow position:
               
chr15:24976837-24977081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
109-353
               

               
Cow position:
               
chr15:24074660-24074911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 224
               

               
Conread position:
               
109-354
               

               
Cow position:
               
chr15:12316278-12316035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr15:25133556-25133807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
109-361
               

               
Cow position:
               
chr15:18715583-18715338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
109-365
               

               
Cow position:
               
chr15:40266096-40265829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 247
               

               
Conread position:
               
109-384
               

               
Cow position:
               
chr15:23486819-23487089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
109-384
               

               
Cow position:
               
chr15:23703127-23702858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 236
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr15:30820481-30820788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
109-419
               

               
Cow position:
               
chr15:19119263-19119568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr15:4728763-4729096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
109-476
               

               
Cow position:
               
chr15:9928710-9928345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
109-495
               

               
Cow position:
               
chr15:21388813-21389194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
109-541
               

               
Cow position:
               
chr15:31949354-31948923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 238
               

               
Conread position:
               
109-556
               

               
Cow position:
               
chr15:39490297-39490756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
102, 277
               

               
Conread position:
               
109-561
               

               
Cow position:
               
chr15:32979680-32980134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 241
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr15:30316238-30316670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr15:46563125-46563587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 158
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr15:25208410-25208872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
109-576
               

               
Cow position:
               
chr15:4676652-4677112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr15:24968141-24967681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
111-257
               

               
Cow position:
               
chr15:36787662-36787508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
112-268
               

               
Cow position:
               
chr15:22607158-22607002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
112-344
               

               
Cow position:
               
chr15:11362831-11363062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
215, 102
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr15:9871060-9871365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
112-437
               

               
Cow position:
               
chr15:53353204-53353523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
112-471
               

               
Cow position:
               
chr15:29340413-29340052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
112-478
               

               
Cow position:
               
chr15:8230229-8230583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
112-482
               

               
Cow position:
               
chr15:15573471-15573855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
112-488
               

               
Cow position:
               
chr15:33625304-33624931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
112-561
               

               
Cow position:
               
chr15:16543113-16543538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 91
               

               
Conread position:
               
112-563
               

               
Cow position:
               
chr15:1329750-1330211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
113-253
               

               
Cow position:
               
chr15:16449054-16448918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
113-257
               

               
Cow position:
               
chr15:8629935-8630081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
113-261
               

               
Cow position:
               
chr15:37238222-37238073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:41087513-41087696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
113-294
               

               
Cow position:
               
chr15:5658512-5658326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
113-294
               

               
Cow position:
               
chr15:24822033-24822212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr15:39090612-39090437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr15:13669554-13669738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr15:7980500-7980315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 148
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr15:40189767-40189957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr15:48403797-48404004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr15:2040540-2040323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr15:18263492-18263275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr15:19397477-19397691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 164
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr15:6082292-6082511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 184
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr15:34104616-34104402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 111
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr15:51831242-51831477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr15:1702039-1701800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr15:38898775-38898535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr15:6163494-6163253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr15:29272541-29272305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 223
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr15:22751801-22751562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
99, 169
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr15:37716573-37716820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr15:10615391-10615623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr15:50059212-50059460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 227
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr15:5498679-5498925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
113-357
               

               
Cow position:
               
chr15:28126699-28126945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
113-358
               

               
Cow position:
               
chr15:39805997-39805754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr15:7578777-7579036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
113-383
               

               
Cow position:
               
chr15:13683934-13684188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr15:237078-236791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
113-436
               

               
Cow position:
               
chr15:37395321-37395648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 236
               

               
Conread position:
               
113-437
               

               
Cow position:
               
chr15:24941036-24941346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
113-438
               

               
Cow position:
               
chr15:19054599-19054271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr15:4603366-4603045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr15:6385709-6385388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr15:40546832-40547159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 85
               

               
Conread position:
               
113-443
               

               
Cow position:
               
chr15:41619836-41620171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 232
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr15:27732748-27732426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 141
               

               
Conread position:
               
113-450
               

               
Cow position:
               
chr15:6657455-6657109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
113-454
               

               
Cow position:
               
chr15:53183229-53183567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 222
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr15:16640133-16639780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
113-464
               

               
Cow position:
               
chr15:41360612-41360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
113-471
               

               
Cow position:
               
chr15:26404619-26404274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 92
               

               
Conread position:
               
113-486
               

               
Cow position:
               
chr15:33976343-33976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 101
               

               
Conread position:
               
113-486
               

               
Cow position:
               
chr15:46868362-46868738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
113-487
               

               
Cow position:
               
chr15:17260807-17261189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
113-489
               

               
Cow position:
               
chr15:10336101-10335729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
113-493
               

               
Cow position:
               
chr15:16307766-16307392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 208
               

               
Conread position:
               
113-496
               

               
Cow position:
               
chr15:7191912-7192296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr15:16583362-16583724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
113-501
               

               
Cow position:
               
chr15:42415608-42415211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 85
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr15:6530494-6530896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr15:31283718-31283295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 172
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr15:38806149-38806592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr15:47274723-47274277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 170
               

               
Conread position:
               
113-552
               

               
Cow position:
               
chr15:27123200-27123626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 174
               

               
Conread position:
               
113-555
               

               
Cow position:
               
chr15:26079020-26079440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
113-557
               

               
Cow position:
               
chr15:8578766-8579233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 236
               

               
Conread position:
               
113-560
               

               
Cow position:
               
chr15:12785786-12785328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 221
               

               
Conread position:
               
113-560
               

               
Cow position:
               
chr15:33662844-33662412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
110, 173
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:3494142-3493671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 267
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:5984256-5984697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:6226849-6227286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
247, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:8428355-8427902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 68
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:12170588-12170152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:18605734-18605297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:20370117-20370562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:25666873-25667335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 180
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:26911731-26912178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:28924419-28924872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:29026528-29026993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:30985931-30986396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 177
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:36259241-36259707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:43030672-43031136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:47803876-47803423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr15:49738697-49739126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
113-573
               

               
Cow position:
               
chr15:28039102-28038682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr15:18720664-18720222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 231
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr15:20458950-20459424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 274
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr15:7430331-7429852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 226
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr15:14505777-14505332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr15:16112754-16112280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr15:22531411-22530966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 184
               

               
Conread position:
               
113-576
               

               
Cow position:
               
chr15:21832074-21832558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 378
               

               
Conread position:
               
113-578
               

               
Cow position:
               
chr15:22532591-22532136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 229
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr15:6970334-6969866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr15:15041084-15041548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 208
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr15:20422414-20422887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr15:21608381-21608842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 84
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr15:1301490-1301024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 229
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr15:4788621-4789090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 165
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr15:28140722-28141196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
104, 218
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr15:21365850-21366314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
113-587
               

               
Cow position:
               
chr15:5234655-5235117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
115-384
               

               
Cow position:
               
chr15:15707772-15708035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 38
               

               
Conread position:
               
115-584
               

               
Cow position:
               
chr15:43827424-43827895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
116-210
               

               
Cow position:
               
chr15:10607706-10607800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-214
               

               
Cow position:
               
chr15:12199679-12199777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-237
               

               
Cow position:
               
chr15:5930924-5930802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
116-253
               

               
Cow position:
               
chr15:53231812-53231676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
116-265
               

               
Cow position:
               
chr15:12359593-12359441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-276
               

               
Cow position:
               
chr15:28450239-28450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
116-292
               

               
Cow position:
               
chr15:12063677-12063496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
116-292
               

               
Cow position:
               
chr15:21903098-21903278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
116-303
               

               
Cow position:
               
chr15:34255401-34255586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr15:1128336-1128136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr15:9267717-9267914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr15:42584829-42585043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-325
               

               
Cow position:
               
chr15:22759390-22759174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr15:19403324-19403112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr15:22168405-22168180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr15:34744150-34743930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 122
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr15:7827691-7827917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr15:17683375-17683149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
116-340
               

               
Cow position:
               
chr15:9642780-9642548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-344
               

               
Cow position:
               
chr15:43248424-43248655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr15:348940-349176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr15:46324991-46324760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr15:5567974-5568213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 231
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr15:14577773-14577528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 200
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr15:37985214-37985440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr15:41323798-41323563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
140, 212
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr15:19812997-19812757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr15:37632528-37632775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr15:20117457-20117217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr15:23716705-23716942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:692782-692540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 184
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:5020980-5021222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 226
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:5938772-5938529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 216
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:9520481-9520236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 223
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:25510826-25511069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr15:29475921-29475678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 216
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr15:22713483-22713723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 149
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr15:3010731-3010982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-358
               

               
Cow position:
               
chr15:143884-144138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 197
               

               
Conread position:
               
116-359
               

               
Cow position:
               
chr15:11656601-11656349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 239
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr15:7841944-7842198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 215
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr15:27746893-27746640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr15:32064684-32064433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 214
               

               
Conread position:
               
116-396
               

               
Cow position:
               
chr15:40009303-40009588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr15:2210913-2210629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
116-437
               

               
Cow position:
               
chr15:24297886-24298213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 77
               

               
Conread position:
               
116-437
               

               
Cow position:
               
chr15:31356979-31356653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:2081696-2082024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:6152012-6151684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:14627600-14627923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 210
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:15846180-15845862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 190
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:20266987-20266658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 213
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:26191725-26192052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 212
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:31181051-31181379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 216
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:32611445-32611773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 216
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:38984296-38984628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 263
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:42534452-42534781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 218
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:42940802-42941132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 217
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:48557342-48557670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:51221363-51221687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr15:52764384-52764706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
261, 102
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr15:38323177-38322855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 124
               

               
Conread position:
               
116-444
               

               
Cow position:
               
chr15:24044751-24045083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr15:20482490-20482831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 225
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr15:5536096-5535773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr15:26421252-26421583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr15:4535254-4534919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 108
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr15:13515716-13515374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr15:1830913-1830568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 235
               

               
Conread position:
               
116-487
               

               
Cow position:
               
chr15:6491242-6491617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
116-495
               

               
Cow position:
               
chr15:22137030-22136657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
116-501
               

               
Cow position:
               
chr15:16616541-16616156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
116-501
               

               
Cow position:
               
chr15:32287411-32287777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
100, 83
               

               
Conread position:
               
116-504
               

               
Cow position:
               
chr15:363365-362986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 68
               

               
Conread position:
               
116-529
               

               
Cow position:
               
chr15:39082546-39082148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 6
               

               
Conread position:
               
116-554
               

               
Cow position:
               
chr15:2952783-2953226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-555
               

               
Cow position:
               
chr15:1056204-1055756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
116-555
               

               
Cow position:
               
chr15:33306454-33306026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr15:4485491-4485052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr15:34140327-34139895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
116-560
               

               
Cow position:
               
chr15:24797467-24797902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-567
               

               
Cow position:
               
chr15:24994181-24994617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 15
               

               
Conread position:
               
116-568
               

               
Cow position:
               
chr15:6647795-6647343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
116-568
               

               
Cow position:
               
chr15:23798172-23798629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 207
               

               
Conread position:
               
116-568
               

               
Cow position:
               
chr15:47042290-47042750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 131
               

               
Conread position:
               
116-569
               

               
Cow position:
               
chr15:11658218-11658691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 259
               

               
Conread position:
               
116-569
               

               
Cow position:
               
chr15:50957448-50957919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 222
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:6462155-6462603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:6905889-6905429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 242
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:12723425-12722974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:19186268-19186733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 224
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:30800229-30799787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 170
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:35642367-35641902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 220
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr15:39406081-39405632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr15:1083033-1083483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr15:5683481-5683024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 96
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr15:17869947-17870405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr15:20486870-20487314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 96
               

               
Conread position:
               
116-575
               

               
Cow position:
               
chr15:3699935-3700400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 277
               

               
Conread position:
               
116-576
               

               
Cow position:
               
chr15:14871094-14870640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 180
               

               
Conread position:
               
116-576
               

               
Cow position:
               
chr15:45479354-45478885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 191
               

               
Conread position:
               
116-577
               

               
Cow position:
               
chr15:11011262-11011709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 95
               

               
Conread position:
               
116-577
               

               
Cow position:
               
chr15:17100369-17100820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
116-577
               

               
Cow position:
               
chr15:40957926-40957462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 169
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr15:30047189-30047674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 368
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr15:36621765-36621279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 367
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr15:44051152-44051602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr15:47990415-47990889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 134
               

               
Conread position:
               
117-295
               

               
Cow position:
               
chr15:23775615-23775785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
117-384
               

               
Cow position:
               
chr15:6586367-6586638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
117-557
               

               
Cow position:
               
chr15:17196491-17196049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
117-570
               

               
Cow position:
               
chr15:52611659-52611178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 239
               

               
Conread position:
               
117-574
               

               
Cow position:
               
chr15:22532007-22531560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
118-348
               

               
Cow position:
               
chr15:51460572-51460334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
118-364
               

               
Cow position:
               
chr15:44209916-44209667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 219
               

               
Conread position:
               
118-488
               

               
Cow position:
               
chr15:10570274-10570638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
119-252
               

               
Cow position:
               
chr15:102972-103110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
119-257
               

               
Cow position:
               
chr15:29542341-29542200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
119-266
               

               
Cow position:
               
chr15:25618238-25618384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
119-267
               

               
Cow position:
               
chr15:28177806-28177657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
119-277
               

               
Cow position:
               
chr15:52197970-52198124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-294
               

               
Cow position:
               
chr15:31085878-31085702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 116
               

               
Conread position:
               
119-299
               

               
Cow position:
               
chr15:18284585-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
119-311
               

               
Cow position:
               
chr15:12836976-12837165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
119-311
               

               
Cow position:
               
chr15:33605265-33605072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr15:21913489-21913278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr15:39969652-39969865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
119-341
               

               
Cow position:
               
chr15:13846233-13846472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
119-343
               

               
Cow position:
               
chr15:38846440-38846220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
136, 84
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr15:29792568-29792794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr15:15215364-15215134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr15:50547845-50548080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr15:18206167-18206400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr15:27281206-27280980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr15:52380634-52380401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr15:24038065-24038287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr15:28236557-28236784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr15:44252705-44252470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr15:11957877-11957647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr15:27247857-27247608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr15:27890613-27890852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 215
               

               
Conread position:
               
119-358
               

               
Cow position:
               
chr15:11692692-11692935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 233
               

               
Conread position:
               
119-364
               

               
Cow position:
               
chr15:9177868-9178111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
119-364
               

               
Cow position:
               
chr15:39363673-39363920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
119-368
               

               
Cow position:
               
chr15:36422999-36422753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
119-368
               

               
Cow position:
               
chr15:53680424-53680665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
97, 137
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr15:52739780-52740036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
119-412
               

               
Cow position:
               
chr15:6331714-6331989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 80
               

               
Conread position:
               
119-438
               

               
Cow position:
               
chr15:30809917-30810233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr15:4389372-4389694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 212
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr15:18781636-18781957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 209
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr15:37822966-37823302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 273
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr15:52454789-52454456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 238
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr15:7962421-7962097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 137
               

               
Conread position:
               
119-446
               

               
Cow position:
               
chr15:2669247-2668921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
119-446
               

               
Cow position:
               
chr15:3572360-3572683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 96
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr15:21837033-21836697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 239
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr15:23767921-23768243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 199
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr15:31616660-31616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
119-451
               

               
Cow position:
               
chr15:5727982-5727666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
119-462
               

               
Cow position:
               
chr15:45323127-45322780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
119-466
               

               
Cow position:
               
chr15:23567783-23568131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 23
               

               
Conread position:
               
119-495
               

               
Cow position:
               
chr15:34206853-34207220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 88
               

               
Conread position:
               
119-498
               

               
Cow position:
               
chr15:44641241-44640862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
119-504
               

               
Cow position:
               
chr15:50302530-50302144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
119-546
               

               
Cow position:
               
chr15:25584745-25585177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 165
               

               
Conread position:
               
119-556
               

               
Cow position:
               
chr15:1298080-1297651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
119-562
               

               
Cow position:
               
chr15:45075-45527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
119-568
               

               
Cow position:
               
chr15:608507-608036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
119-568
               

               
Cow position:
               
chr15:45245206-45245648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr15:20472202-20472654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr15:35838746-35839207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr15:38162352-38161890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr15:51427479-51427936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
119-573
               

               
Cow position:
               
chr15:5571292-5571741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 225
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr15:22553180-22553654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr15:43626806-43626351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
119-576
               

               
Cow position:
               
chr15:24128993-24128549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 164
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr15:794669-795137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr15:33303677-33303191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr15:17268281-17268740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr15:38883500-38883018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 295
               

               
Conread position:
               
120-257
               

               
Cow position:
               
chr15:45919725-45919587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
120-278
               

               
Cow position:
               
chr15:36618522-36618357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
120-309
               

               
Cow position:
               
chr15:3497396-3497212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
184, 135
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr15:19781876-19781693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
120-344
               

               
Cow position:
               
chr15:4373818-4373592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 148
               

               
Conread position:
               
120-344
               

               
Cow position:
               
chr15:14322720-14322938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 141
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr15:46611261-46611042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
120-352
               

               
Cow position:
               
chr15:5527531-5527291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
120-352
               

               
Cow position:
               
chr15:33680991-33680760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
120-353
               

               
Cow position:
               
chr15:23791800-23791562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
120-493
               

               
Cow position:
               
chr15:4093582-4093964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
120-503
               

               
Cow position:
               
chr15:29604374-29604741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr15:24285329-24284942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 251
               

               
Conread position:
               
120-509
               

               
Cow position:
               
chr15:37931426-37931809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
224, 91
               

               
Conread position:
               
120-557
               

               
Cow position:
               
chr15:53101931-53101488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
120-566
               

               
Cow position:
               
chr15:21894125-21893675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 293
               

               
Conread position:
               
120-571
               

               
Cow position:
               
chr15:20534106-20534563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
120-571
               

               
Cow position:
               
chr15:51822485-51822040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
120-575
               

               
Cow position:
               
chr15:14020814-14020383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
120-581
               

               
Cow position:
               
chr15:50341451-50340995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
210, 22
               

               
Conread position:
               
121-237
               

               
Cow position:
               
chr15:26922638-26922757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
121-267
               

               
Cow position:
               
chr15:53019739-53019591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr15:241190-240995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
121-348
               

               
Cow position:
               
chr15:39894920-39894700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
121-348
               

               
Cow position:
               
chr15:41583253-41583022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
121-364
               

               
Cow position:
               
chr15:15343483-15343237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 208
               

               
Conread position:
               
121-439
               

               
Cow position:
               
chr15:12553981-12554303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 208
               

               
Conread position:
               
121-548
               

               
Cow position:
               
chr15:23180764-23180358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
121-560
               

               
Cow position:
               
chr15:16476402-16476850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr15:29353214-29353665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
121-574
               

               
Cow position:
               
chr15:4138478-4138021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
121-585
               

               
Cow position:
               
chr15:8665240-8665732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 243
               

               
Conread position:
               
122-257
               

               
Cow position:
               
chr15:29861701-29861562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
122-297
               

               
Cow position:
               
chr15:34284021-34284197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr15:25110824-25111052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr15:48486974-48486733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
122-492
               

               
Cow position:
               
chr15:39621679-39621310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
122-567
               

               
Cow position:
               
chr15:13285375-13284929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
149, 352
               

               
Conread position:
               
122-574
               

               
Cow position:
               
chr15:31202347-31201889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 195
               

               
Conread position:
               
122-584
               

               
Cow position:
               
chr15:16927743-16928212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
122-585
               

               
Cow position:
               
chr15:40798085-40798540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
123-354
               

               
Cow position:
               
chr15:45217160-45216927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
123-567
               

               
Cow position:
               
chr15:37381971-37381523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 231
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr15:37964879-37964645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
125-384
               

               
Cow position:
               
chr15:47105374-47105120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
125-496
               

               
Cow position:
               
chr15:15881271-15880890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
125-578
               

               
Cow position:
               
chr15:22938439-22938884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 79
               

               
Conread position:
               
127-307
               

               
Cow position:
               
chr15:10284030-10283851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
127-320
               

               
Cow position:
               
chr15:3051694-3051490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
127-333
               

               
Cow position:
               
chr15:44256813-44256605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr15:9072097-9072306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
127-360
               

               
Cow position:
               
chr15:19733701-19733463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 207
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr15:21826703-21826939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
127-374
               

               
Cow position:
               
chr15:20725279-20725528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
127-380
               

               
Cow position:
               
chr15:21523126-21522869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 215
               

               
Conread position:
               
127-533
               

               
Cow position:
               
chr15:32226550-32226938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
127-567
               

               
Cow position:
               
chr15:47822135-47821727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 25
               

               
Conread position:
               
127-568
               

               
Cow position:
               
chr15:5730273-5729849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 76
               

               
Conread position:
               
127-569
               

               
Cow position:
               
chr15:52451962-52451503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 219
               

               
Conread position:
               
127-571
               

               
Cow position:
               
chr15:29810445-29810015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
127-571
               

               
Cow position:
               
chr15:33285218-33284766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 228
               

               
Conread position:
               
127-575
               

               
Cow position:
               
chr15:52778193-52778637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 192
               

               
Conread position:
               
127-581
               

               
Cow position:
               
chr15:10245673-10246115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
127-584
               

               
Cow position:
               
chr15:19771460-19771015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
128-345
               

               
Cow position:
               
chr15:8027743-8027517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
128-438
               

               
Cow position:
               
chr15:31545014-31545325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 226
               

               
Conread position:
               
128-571
               

               
Cow position:
               
chr15:36392004-36391561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
128-571
               

               
Cow position:
               
chr15:39599775-39599339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 209
               

               
Conread position:
               
128-574
               

               
Cow position:
               
chr15:27972880-27973319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 222
               

               
Conread position:
               
128-574
               

               
Cow position:
               
chr15:30002024-30001583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
128-584
               

               
Cow position:
               
chr15:31857927-31857467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 213
               

               
Conread position:
               
129-257
               

               
Cow position:
               
chr15:53265813-53265942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
129-348
               

               
Cow position:
               
chr15:26701742-26701965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 134
               

               
Conread position:
               
129-373
               

               
Cow position:
               
chr15:40095176-40095424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 164
               

               
Conread position:
               
129-383
               

               
Cow position:
               
chr15:16936524-16936768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
129-448
               

               
Cow position:
               
chr15:27862991-27863312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
129-554
               

               
Cow position:
               
chr15:52482496-52482922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
129-554
               

               
Cow position:
               
chr15:53164353-53163927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
129-570
               

               
Cow position:
               
chr15:26158284-26158708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
130-567
               

               
Cow position:
               
chr15:21421274-21420841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
130-576
               

               
Cow position:
               
chr15:17084545-17084092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 158
               

               
Conread position:
               
130-581
               

               
Cow position:
               
chr15:16823269-16822829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
130-584
               

               
Cow position:
               
chr15:20082093-20081651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 181
               

               
Conread position:
               
131-433
               

               
Cow position:
               
chr15:5633004-5632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
245, 78
               

               
Conread position:
               
131-470
               

               
Cow position:
               
chr15:24128352-24128023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
131-567
               

               
Cow position:
               
chr15:41225231-41225678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
131-571
               

               
Cow position:
               
chr15:21941515-21941958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
132-266
               

               
Cow position:
               
chr15:10450570-10450711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr15:4501311-4501129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
132-339
               

               
Cow position:
               
chr15:23332551-23332755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
132-340
               

               
Cow position:
               
chr15:37470525-37470329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
132-404
               

               
Cow position:
               
chr15:14856149-14856409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
132-451
               

               
Cow position:
               
chr15:13387414-13387088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 274
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr15:19279763-19280116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr15:50177427-50177084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
132-512
               

               
Cow position:
               
chr15:40999727-41000117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
39, 230
               

               
Conread position:
               
132-571
               

               
Cow position:
               
chr15:10456682-10457138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
132-571
               

               
Cow position:
               
chr15:24616898-24616457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
132-574
               

               
Cow position:
               
chr15:20390367-20390823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 231
               

               
Conread position:
               
132-575
               

               
Cow position:
               
chr15:37645300-37644874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
132-581
               

               
Cow position:
               
chr15:22939002-22939443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 83
               

               
Conread position:
               
132-586
               

               
Cow position:
               
chr15:17233525-17233061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 217
               

               
Conread position:
               
134-299
               

               
Cow position:
               
chr15:6045985-6046155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr15:52683498-52683318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
134-318
               

               
Cow position:
               
chr15:33525755-33525559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr15:11629553-11629803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
173, 77
               

               
Conread position:
               
134-586
               

               
Cow position:
               
chr15:18018240-18017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
362, 29
               

               
Conread position:
               
135-271
               

               
Cow position:
               
chr15:12259657-12259524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
135-345
               

               
Cow position:
               
chr15:37777679-37777475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
135-443
               

               
Cow position:
               
chr15:36782004-36782311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 79
               

               
Conread position:
               
135-557
               

               
Cow position:
               
chr15:35112560-35112969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
136-323
               

               
Cow position:
               
chr15:14259609-14259789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
136-352
               

               
Cow position:
               
chr15:22886876-22886658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr15:22095448-22095210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
118, 75
               

               
Conread position:
               
136-439
               

               
Cow position:
               
chr15:26637989-26637682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
136-552
               

               
Cow position:
               
chr15:17763226-17762817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 6
               

               
Conread position:
               
136-569
               

               
Cow position:
               
chr15:21908261-21907836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
136-571
               

               
Cow position:
               
chr15:36435537-36435092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 206
               

               
Conread position:
               
136-574
               

               
Cow position:
               
chr15:12304968-12304526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
136-579
               

               
Cow position:
               
chr15:38394747-38394308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
136-580
               

               
Cow position:
               
chr15:49922466-49922016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
137-451
               

               
Cow position:
               
chr15:35417294-35417614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 205
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr15:26573712-26573340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
138-351
               

               
Cow position:
               
chr15:11289394-11289181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
138-574
               

               
Cow position:
               
chr15:50322920-50322498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 214
               

               
Conread position:
               
139-552
               

               
Cow position:
               
chr15:14740343-14740778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 210
               

               
Conread position:
               
141-493
               

               
Cow position:
               
chr15:43776661-43776327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
248, 70
               

               
Conread position:
               
142-273
               

               
Cow position:
               
chr15:15738670-15738534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
142-294
               

               
Cow position:
               
chr15:38683535-38683376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
142-301
               

               
Cow position:
               
chr15:33243479-33243305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
142-380
               

               
Cow position:
               
chr15:51632729-51632954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
142-437
               

               
Cow position:
               
chr15:12163200-12163495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
142-448
               

               
Cow position:
               
chr15:47842937-47843237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
142-478
               

               
Cow position:
               
chr15:20352155-20351816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
142-574
               

               
Cow position:
               
chr15:39598559-39598131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 56
               

               
Conread position:
               
143-574
               

               
Cow position:
               
chr15:23115152-23114721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
144-338
               

               
Cow position:
               
chr15:12733923-12733721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
144-569
               

               
Cow position:
               
chr15:16604141-16603721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
144-571
               

               
Cow position:
               
chr15:27900184-27900615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
144-574
               

               
Cow position:
               
chr15:11995706-11996141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 224
               

               
Conread position:
               
144-584
               

               
Cow position:
               
chr15:10088633-10088197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
145-316
               

               
Cow position:
               
chr15:43673590-43673766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
145-571
               

               
Cow position:
               
chr15:34479000-34478578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
146-557
               

               
Cow position:
               
chr15:26903511-26903097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chr15:43765850-43765657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
149-368
               

               
Cow position:
               
chr15:10846036-10845814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 191
               

               
Conread position:
               
149-497
               

               
Cow position:
               
chr15:42788840-42789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
149-576
               

               
Cow position:
               
chr15:4918738-4919184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
149-584
               

               
Cow position:
               
chr15:20390964-20391400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr15:14576633-14576213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
153-571
               

               
Cow position:
               
chr15:47843797-47844198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
155-459
               

               
Cow position:
               
chr15:49258185-49257867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 168
               

               
Conread position:
               
155-493
               

               
Cow position:
               
chr15:17353342-17353676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 107
               

               
Conread position:
               
155-584
               

               
Cow position:
               
chr15:225495-225926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
157-571
               

               
Cow position:
               
chr15:8007287-8006868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
158-439
               

               
Cow position:
               
chr15:4954066-4954341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
158-571
               

               
Cow position:
               
chr15:6168210-6168643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
159-503
               

               
Cow position:
               
chr15:51898535-51898187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
159-571
               

               
Cow position:
               
chr15:44658664-44658256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
160-571
               

               
Cow position:
               
chr15:1722548-1722951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
161-410
               

               
Cow position:
               
chr15:24305176-24305430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
161-558
               

               
Cow position:
               
chr15:9622494-9622083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
161-571
               

               
Cow position:
               
chr15:24031481-24031086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
162-352
               

               
Cow position:
               
chr15:50351118-50350934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
162-574
               

               
Cow position:
               
chr15:26918972-26919382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
163-358
               

               
Cow position:
               
chr15:11646189-11646383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
164-319
               

               
Cow position:
               
chr15:44437033-44436872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr15:5071801-5071998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 127
               
UCSC Genome Browser

               
Conread position:
               
164-487
               

               
Cow position:
               
chr15:9970684-9971003 (view  custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
182, 64
               
UCSC Genome Browser

               
               
               
Conread position:
166-584

               
               
               
Cow position:
chr15:1804031-1804454 (view  custom track)

               
               
               
Alignm length:
435

               
               
               
Alignm identity:
289

               
               
               
Alignm E-value:
2e-40

               
               
               
Alignm gaps (pig, cow):
50, 190
UCSC Genome Browser

               
               
               
Conread position:
167-439

               
               
               
Cow position:
chr15:9526172-9526455 (view  custom track)

               
               
               
Alignm length:
288

               
               
               
Alignm identity:
202

               
               
               
Alignm E-value:
9e-32

               
               
               
Alignm gaps (pig, cow):
45, 194

               
               
               Conread position:168-556
               
               
               Cow position:chr15:23696622-23696997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):216, 43

               
               
               Conread position:170-341
               
               
               Cow position:chr15:34144862-34145037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:171-498
               
               
               Cow position:chr15:2141003-2141337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:225
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):31, 169

               
               
               Conread position:171-557
               
               
               Cow position:chr15:5420590-5420978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 84

               
               
               Conread position:172-441
               
               
               Cow position:chr15:39436503-39436238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):160, 57

               
               
               Conread position:172-567
               
               
               Cow position:chr15:16667208-16667604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:270
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):44, 124

               
               
               Conread position:172-567
               
               
               Cow position:chr15:21821629-21822033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:271
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):33, 130

               
               
               Conread position:173-555
               
               
               Cow position:chr15:33643376-33642996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):177, 47

               
               
               Conread position:174-573
               
               
               Cow position:chr15:8610029-8610446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:269
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):46, 175

               
               
               Conread position:175-576
               
               
               Cow position:chr15:36773406-36773797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:288
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):37, 176

               
               
               Conread position:175-577
               
               
               Cow position:chr15:7456985-7456601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:406
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 199

               
               
               Conread position:176-576
               
               
               Cow position:chr15:30985492-30985887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:268
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):39, 164

               
               
               Conread position:176-584
               
               
               Cow position:chr15:41125280-41125682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 175

               
               
               Conread position:176-585
               
               
               Cow position:chr15:31137174-31137590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:278
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):44, 173

               
               
               Conread position:178-563
               
               
               Cow position:chr15:39619443-39619040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:271
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):34, 137

               
               
               Conread position:179-567
               
               
               Cow position:chr15:36888104-36887733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 29

               
               
               Conread position:181-511
               
               
               Cow position:chr15:7535386-7535704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:215
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):74, 150

               
               
               Conread position:181-557
               
               
               Cow position:chr15:25907195-25906822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 89

               
               
               Conread position:181-560
               
               
               Cow position:chr15:4861628-4862006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:268
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):34, 157

               
               
               Conread position:181-563
               
               
               Cow position:chr15:245056-244680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 100

               
               
               Conread position:181-571
               
               
               Cow position:chr15:16439543-16439944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:269
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):40, 134

               
               
               Conread position:182-426
               
               
               Cow position:chr15:38877022-38877268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:190
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):37, 90

               
               
               Conread position:182-562
               
               
               Cow position:chr15:41045686-41045301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:266
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):34, 9

               
               
               Conread position:183-410
               
               
               Cow position:chr15:38103610-38103833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):37, 70

               
               
               Conread position:184-383
               
               
               Cow position:chr15:5715831-5715631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:152
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):32, 163

               
               
               Conread position:185-485
               
               
               Cow position:chr15:37205323-37205025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):18, 143

               
               
               Conread position:187-581
               
               
               Cow position:chr15:32323929-32324328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:267
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):31, 167

               
               
               Conread position:189-471
               
               
               Cow position:chr15:6905332-6905068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):6, 23

               
               
               Conread position:192-498
               
               
               Cow position:chr15:35945787-35945496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):138, 19

               
               
               Conread position:193-442
               
               
               Cow position:chr15:10737481-10737724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):68, 34

               
               
               Conread position:193-556
               
               
               Cow position:chr15:21582649-21583022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:245
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):21, 122

               
               
               Conread position:194-541
               
               
               Cow position:chr15:23865801-23866152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:239
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):62, 118

               
               
               Conread position:195-330
               
               
               Cow position:chr15:17858970-17859106 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:103
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):13, 66

               
               
               Conread position:195-380
               
               
               Cow position:chr15:16657760-16657574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:197-465
               
               
               Cow position:chr15:26117769-26117521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):187, 35

               
               
               Conread position:198-562
               
               
               Cow position:chr15:84986-85347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:249
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):16, 5

               
               
               Conread position:199-498
               
               
               Cow position:chr15:5726586-5726287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):62, 149

               
               
               Conread position:200-391
               
               
               Cow position:chr15:23927209-23927403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:139
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):62, 32

               
               
               Conread position:201-584
               
               
               Cow position:chr15:23572417-23572809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:268
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):15, 115

               
               
               Conread position:202-504
               
               
               Cow position:chr15:12655655-12655957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:216
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):39, 9

               
               
               Conread position:203-571
               
               
               Cow position:chr15:16018292-16017923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:239
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):57, 78

               
               
               Conread position:204-584
               
               
               Cow position:chr15:11560256-11560643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:263
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):55, 13

               
               
               Conread position:207-588
               
               
               Cow position:chr15:53036715-53037092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:259
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):125, 42

               
               
               Conread position:212-352
               
               
               Cow position:chr15:33770866-33770725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:106
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:212-425
               
               
               Cow position:chr15:16904876-16904667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):48, 133

               
               
               Conread position:212-439
               
               
               Cow position:chr15:47279891-47280116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:158
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):48, 127

               
               
               Conread position:212-442
               
               
               Cow position:chr15:23598063-23598297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):44, 123

               
               
               Conread position:212-459
               
               
               Cow position:chr15:10608057-10608303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:178
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):118, 132

               
               
               Conread position:212-498
               
               
               Cow position:chr15:22871855-22871580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:198
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):49, 138

               
               
               Conread position:212-498
               
               
               Cow position:chr15:47592411-47592699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):47, 12

               
               
               Conread position:212-548
               
               
               Cow position:chr15:32242227-32241888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:232
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):47, 71

               
               
               Conread position:212-552
               
               
               Cow position:chr15:5444229-5443890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:230
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):49, 16

               
               
               Conread position:212-557
               
               
               Cow position:chr15:11559108-11559448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):49, 18

               
               
               Conread position:212-564
               
               
               Cow position:chr15:18671199-18671552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:246
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):16, 250

               
               
               Conread position:212-575
               
               
               Cow position:chr15:4296013-4295646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:246
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):113, 89

               
               
               Conread position:212-581
               
               
               Cow position:chr15:16261562-16261209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 28

               
               
               Conread position:212-584
               
               
               Cow position:chr15:44377524-44377147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:252
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):44, 136

               
               
               Conread position:212-585
               
               
               Cow position:chr15:275892-275520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:274
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):172, 69

               
               
               Conread position:212-585
               
               
               Cow position:chr15:23275783-23275409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):174, 61

               
               
               Conread position:212-586
               
               
               Cow position:chr15:38837995-38837620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:259
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):46, 108

               
               
               Conread position:213-574
               
               
               Cow position:chr15:49230098-49230426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:246
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:213-584
               
               
               Cow position:chr15:18975518-18975886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:239
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):42, 123

               
               
               Conread position:214-487
               
               
               Cow position:chr15:53045632-53045902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):170, 55

               
               
               Conread position:214-498
               
               
               Cow position:chr15:39316588-39316876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:198
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):47, 92

               
               
               Conread position:214-533
               
               
               Cow position:chr15:25386689-25386366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:222
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):41, 112

               
               
               Conread position:215-465
               
               
               Cow position:chr15:3726364-3726121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):169, 46

               
               
               Conread position:215-501
               
               
               Cow position:chr15:29331249-29330969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):12, 18

               
               
               Conread position:215-559
               
               
               Cow position:chr15:8354289-8353943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):169, 0

               
               
               Conread position:217-533
               
               
               Cow position:chr15:50265246-50265560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):38, 30

               
               
               Conread position:220-571
               
               
               Cow position:chr15:22930099-22930460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:245
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):35, 315

               
               
               Conread position:220-576
               
               
               Cow position:chr15:286719-286358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:248
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):110, 42

               
               
               Conread position:222-557
               
               
               Cow position:chr15:7307914-7308254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:225
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):37, 65

               
               
               Conread position:222-574
               
               
               Cow position:chr15:36353907-36353553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):164, 85

               
               
               Conread position:223-496
               
               
               Cow position:chr15:12870626-12870896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):31, 114

               
               
               Conread position:224-440
               
               
               Cow position:chr15:10512034-10512250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):94, 70

               
               
               Conread position:224-571
               
               
               Cow position:chr15:662235-662574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):47, 18

               
               
               Conread position:224-577
               
               
               Cow position:chr15:9879159-9879496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:254
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):210, 60

               
               
               Conread position:226-560
               
               
               Cow position:chr15:11987173-11987508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:233
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):10, 129

               
               
               Conread position:227-482
               
               
               Cow position:chr15:43599418-43599169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):163, 11

               
               
               Conread position:227-524
               
               
               Cow position:chr15:915612-915905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):37, 58

               
               
               Conread position:229-560
               
               
               Cow position:chr15:34896994-34896662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:236
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):83, 68

               
               
               Conread position:230-532
               
               
               Cow position:chr15:9107267-9106970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):26, 113

               
               
               Conread position:232-535
               
               
               Cow position:chr15:17337587-17337295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:217
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):152, 104

               
               
               Conread position:232-570
               
               
               Cow position:chr15:53716661-53716325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 75

               
               
               Conread position:232-571
               
               
               Cow position:chr15:1857956-1857616 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:221
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):42, 230

               
               
               Conread position:232-571
               
               
               Cow position:chr15:4418172-4418512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:234
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):23, 108

               
               
               Conread position:232-574
               
               
               Cow position:chr15:28823590-28823925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:243
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):29, 63

               
               
               Conread position:233-347
               
               
               Cow position:chr15:36724952-36725068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:93
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:234-575
               
               
               Cow position:chr15:49274178-49273848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):96, 109

               
               
               Conread position:234-584
               
               
               Cow position:chr15:2380583-2380243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:240
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):105, 185

               
               
               Conread position:234-585
               
               
               Cow position:chr15:1503131-1502789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):98, 25

               
               
               Conread position:235-552
               
               
               Cow position:chr15:24981967-24982270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:222
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):263, 73

               
               
               Conread position:238-576
               
               
               Cow position:chr15:24804566-24804914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:222
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):22, 59

               
               
               Conread position:239-574
               
               
               Cow position:chr15:33178203-33178539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:218
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):91, 127

               
               
               Conread position:244-582
               
               
               Cow position:chr15:10231525-10231864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):17, 245

               
               
               Conread position:244-585
               
               
               Cow position:chr15:30470753-30471103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 0

               
               
               Conread position:245-569
               
               
               Cow position:chr15:51307464-51307778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):139, 203

               
               
               Conread position:248-570
               
               
               Cow position:chr15:39326299-39326610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):11, 99

               
               
               Conread position:253-571
               
               
               Cow position:chr15:5717917-5717609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:216
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):79, 25

               
               
               Conread position:254-574
               
               
               Cow position:chr15:5158581-5158258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:213
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):131, 71

               
               
               Conread position:254-584
               
               
               Cow position:chr15:38036735-38037068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:220
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):56, 99

               
               
               Conread position:256-571
               
               
               Cow position:chr15:31928694-31929008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:216
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):129, 60

               
               
               Conread position:258-563
               
               
               Cow position:chr15:37865568-37865258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):79, 20

               
               
               Conread position:259-581
               
               
               Cow position:chr15:40379413-40379090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):126, 74

               
               
               Conread position:259-584
               
               
               Cow position:chr15:33693161-33693495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:214
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):126, 84

               
               
               Conread position:263-486
               
               
               Cow position:chr15:48710856-48711078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):73, 20

               
               
               Conread position:263-571
               
               
               Cow position:chr15:49784093-49784391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):123, 45

               
               
               Conread position:264-557
               
               
               Cow position:chr15:14888444-14888733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 199

               
               
               Conread position:264-571
               
               
               Cow position:chr15:6232819-6233125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):121, 92

               
               
               Conread position:264-571
               
               
               Cow position:chr15:23779875-23780181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):64, 78

               
               
               Conread position:264-571
               
               
               Cow position:chr15:34284215-34284517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):122, 47

               
               
               Conread position:265-512
               
               
               Cow position:chr15:5658038-5657786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):19, 89

               
               
               Conread position:265-571
               
               
               Cow position:chr15:19807522-19807833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):120, 78

               
               
               Conread position:265-585
               
               
               Cow position:chr15:19950669-19950361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):67, 44

               
               
               Conread position:266-482
               
               
               Cow position:chr15:10660357-10660575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):69, 83

               
               
               Conread position:266-571
               
               
               Cow position:chr15:14474532-14474230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):56, 42

               
               
               Conread position:268-497
               
               
               Cow position:chr15:12843-12615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):66, 16

               
               
               Conread position:268-557
               
               
               Cow position:chr15:9465870-9465578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:195
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):67, 47

               
               
               Conread position:269-512
               
               
               Cow position:chr15:35440884-35441126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):69, 120

               
               
               Conread position:269-567
               
               
               Cow position:chr15:39832782-39833084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):13, 82

               
               
               Conread position:270-586
               
               
               Cow position:chr15:28047564-28047886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:215
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):115, 73

               
               
               Conread position:272-557
               
               
               Cow position:chr15:36776462-36776173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):29, 80

               
               
               Conread position:272-584
               
               
               Cow position:chr15:52317246-52316937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 27

               
               
               Conread position:273-571
               
               
               Cow position:chr15:10400083-10400385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):59, 84

               
               
               Conread position:273-574
               
               
               Cow position:chr15:35425626-35425905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:217
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):113, 65

               
               
               Conread position:273-576
               
               
               Cow position:chr15:5719621-5719919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:202
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):58, 6

               
               
               Conread position:276-548
               
               
               Cow position:chr15:49950842-49950577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:173
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:284-450
               
               
               Cow position:chr15:18647554-18647392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):49, 125

               
               
               Conread position:285-574
               
               
               Cow position:chr15:41527802-41528079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:286-559
               
               
               Cow position:chr15:43851410-43851685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):63, 51

               
               
               Conread position:288-574
               
               
               Cow position:chr15:10442331-10442625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:210
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):48, 90

               
               
               Conread position:289-493
               
               
               Cow position:chr15:16908603-16908404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):97, 35

               
               
               Conread position:289-497
               
               
               Cow position:chr15:21821160-21820956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):95, 118

               
               
               Conread position:289-571
               
               
               Cow position:chr15:13432665-13432372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:201
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):40, 25

               
               
               Conread position:289-576
               
               
               Cow position:chr15:15986711-15987007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):96, 61

               
               
               Conread position:293-574
               
               
               Cow position:chr15:14988157-14987882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 16

               
               
               Conread position:293-574
               
               
               Cow position:chr15:41056037-41056322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):93, 32

               
               
               Conread position:294-501
               
               
               Cow position:chr15:26718754-26718959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):92, 76

               
               
               Conread position:295-571
               
               
               Cow position:chr15:36846009-36846297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):91, 118

               
               
               Conread position:297-579
               
               
               Cow position:chr15:41053603-41053890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):25, 17

               
               
               Conread position:299-536
               
               
               Cow position:chr15:12203712-12203471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):86, 50

               
               
               Conread position:299-571
               
               
               Cow position:chr15:31028495-31028770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):86, 17

               
               
               Conread position:300-487
               
               
               Cow position:chr15:37284616-37284428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):36, 20

               
               
               Conread position:301-557
               
               
               Cow position:chr15:25571648-25571908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):84, 48

               
               
               Conread position:303-495
               
               
               Cow position:chr15:40415481-40415673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:133
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):83, 46

               
               
               Conread position:303-574
               
               
               Cow position:chr15:4694903-4694638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):57, 70

               
               
               Conread position:304-492
               
               
               Cow position:chr15:25650264-25650438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):82, 39

               
               
               Conread position:304-571
               
               
               Cow position:chr15:36952043-36952309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):27, 112

               
               
               Conread position:304-577
               
               
               Cow position:chr15:13395707-13395431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):29, 17

               
               
               Conread position:305-574
               
               
               Cow position:chr15:49483783-49483516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):99, 55

               
               
               Conread position:305-575
               
               
               Cow position:chr15:38827169-38827429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):85, 39

               
               
               Conread position:305-588
               
               
               Cow position:chr15:3695790-3695510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:207
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):27, 40

               
               
               Conread position:306-491
               
               
               Cow position:chr15:44237573-44237389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:141
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):78, 44

               
               
               Conread position:306-584
               
               
               Cow position:chr15:15177469-15177192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):79, 37

               
               
               Conread position:309-570
               
               
               Cow position:chr15:32234179-32234421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):80, 33

               
               
               Conread position:314-497
               
               
               Cow position:chr15:34751232-34751054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):72, 28

               
               
               Conread position:319-512
               
               
               Cow position:chr15:40594360-40594555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:323-560
               
               
               Cow position:chr15:13701629-13701871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:162
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):13, 28

               
               
               Conread position:325-580
               
               
               Cow position:chr15:40835250-40834994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):61, 23

               
               
               Conread position:328-584
               
               
               Cow position:chr15:26851092-26851345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):13, 23

               
               
               Conread position:336-571
               
               
               Cow position:chr15:21903281-21903517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):16, 175

               
               
               Conread position:337-571
               
               
               Cow position:chr15:19553794-19554036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:159
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:338-581
               
               
               Cow position:chr15:9979226-9978985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:164
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):10, 93

               
               
               Conread position:339-574
               
               
               Cow position:chr15:50333105-50332862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:172
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):20, 79

               
               
               Conread position:350-557
               
               
               Cow position:chr15:27063408-27063613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:153
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):28, 15

               
               
               Conread position:350-576
               
               
               Cow position:chr15:49132171-49131944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:350-585
               
               
               Cow position:chr15:2931453-2931695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):36, 77

               
               
               Conread position:351-585
               
               
               Cow position:chr15:26442327-26442089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:352-571
               
               
               Cow position:chr15:11908840-11909057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:157
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):47, 61

               
               
               Conread position:355-579
               
               
               Cow position:chr15:19002168-19002401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:361-574
               
               
               Cow position:chr15:26529992-26529783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):24, 124

               
               
               Conread position:362-585
               
               
               Cow position:chr15:41475730-41475951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):24, 14

               
               
               Conread position:372-555
               
               
               Cow position:chr15:10049222-10049408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):14, 37

               
               
               Conread position:372-584
               
               
               Cow position:chr15:34223957-34223744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):14, 167

               
               
               Conread position:374-584
               
               
               Cow position:chr15:15992554-15992764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):12, 56

               
               
               Conread position:376-560
               
               
               Cow position:chr15:36422699-36422519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):10, 98

               
               
               Conread position:383-567
               
               
               Cow position:chr15:14964088-14964266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:383-574
               
               
               Cow position:chr15:28099191-28098998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):104, 161

               
               
               Conread position:393-575
               
               
               Cow position:chr15:46283848-46284030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:141
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:395-567
               
               
               Cow position:chr15:12913431-12913605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:395-571
               
               
               Cow position:chr15:17124401-17124581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):70, 65

               
               
               Conread position:395-571
               
               
               Cow position:chr15:31495156-31495328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:395-574
               
               
               Cow position:chr15:43715390-43715217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:396-571
               
               
               Cow position:chr15:20566978-20566807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):104, 16

               
               
               Conread position:396-575
               
               
               Cow position:chr15:46059428-46059242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:397-567
               
               
               Cow position:chr15:40844554-40844727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:398-584
               
               
               Cow position:chr15:8331138-8331322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):170, 119

               
               
               Conread position:402-585
               
               
               Cow position:chr15:48819105-48818931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):27, 67

               
               
               Conread position:404-570
               
               
               Cow position:chr15:40000979-40000817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:125
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):133, 80

               
               
               Conread position:404-574
               
               
               Cow position:chr15:26849479-26849645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:405-566
               
               
               Cow position:chr15:18703878-18704038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:408-585
               
               
               Cow position:chr15:27975817-27975998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):100, 155

               
               
               Conread position:409-571
               
               
               Cow position:chr15:848696-848537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:127
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):95, 75

               
               
               Conread position:413-569
               
               
               Cow position:chr15:5710451-5710304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:413-574
               
               
               Cow position:chr15:840099-840260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):84, 69

               
               
               Conread position:418-581
               
               
               Cow position:chr15:39473888-39474054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):70, 159

               
               
               Conread position:419-576
               
               
               Cow position:chr15:14883716-14883560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):98, 83

               
               
               Conread position:424-571
               
               
               Cow position:chr15:14969551-14969408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):113, 60

               
               
               Conread position:424-574
               
               
               Cow position:chr15:10153711-10153558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:424-575
               
               
               Cow position:chr15:10199368-10199219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:110
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:424-584
               
               
               Cow position:chr15:43114682-43114843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):44, 37

               
               
               Conread position:424-586
               
               
               Cow position:chr15:53005901-53006059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:429-584
               
               
               Cow position:chr15:47920117-47920270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:430-574
               
               
               Cow position:chr15:9128639-9128780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):106, 51

               
               
               Conread position:434-574
               
               
               Cow position:chr15:49959559-49959424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):50, 0
Show alignments to all cow chromosomes.