• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rste21_g17.5
        

               
Conread position:
               
95-451
               

               
Cow position:
               
chr8:3338820-3339168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
97-218
               

               
Cow position:
               
chr8:39807213-39807091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
98-376
               

               
Cow position:
               
chr8:26960854-26961139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
98-542
               

               
Cow position:
               
chr8:35580893-35580455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
98-579
               

               
Cow position:
               
chr8:36059575-36060052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 253
               

               
Conread position:
               
100-448
               

               
Cow position:
               
chr8:42139305-42138963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
100-538
               

               
Cow position:
               
chr8:38780447-38780880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
100-546
               

               
Cow position:
               
chr8:18049340-18049780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 45
               

               
Conread position:
               
104-557
               

               
Cow position:
               
chr8:3015212-3015677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 88
               

               
Conread position:
               
104-574
               

               
Cow position:
               
chr8:58636511-58636944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr8:39475182-39475454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 179
               

               
Conread position:
               
106-448
               

               
Cow position:
               
chr8:13809954-13810290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
239, 166
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr8:1393973-1394323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
106-459
               

               
Cow position:
               
chr8:29262525-29262875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
106-496
               

               
Cow position:
               
chr8:7610184-7609801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
221, 110
               

               
Conread position:
               
107-303
               

               
Cow position:
               
chr8:18220982-18220782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
108-303
               

               
Cow position:
               
chr8:2621465-2621669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
108-307
               

               
Cow position:
               
chr8:46844788-46844586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
111, 141
               

               
Conread position:
               
109-257
               

               
Cow position:
               
chr8:9809209-9809363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
109-257
               

               
Cow position:
               
chr8:42880850-42880698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
109-265
               

               
Cow position:
               
chr8:27955690-27955533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr8:688507-688321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
109-319
               

               
Cow position:
               
chr8:46834013-46833798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 156
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr8:13634109-13634315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
109-335
               

               
Cow position:
               
chr8:52308980-52308752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 196
               

               
Conread position:
               
109-338
               

               
Cow position:
               
chr8:38254763-38254998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 219
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr8:35436868-35436633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
109-348
               

               
Cow position:
               
chr8:6463950-6463707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
109-352
               

               
Cow position:
               
chr8:608327-608098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
225, 64
               

               
Conread position:
               
109-357
               

               
Cow position:
               
chr8:52229963-52229743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr8:46843115-46842798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 223
               

               
Conread position:
               
109-425
               

               
Cow position:
               
chr8:4745153-4744834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
109-440
               

               
Cow position:
               
chr8:55829592-55829268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 157
               

               
Conread position:
               
109-442
               

               
Cow position:
               
chr8:5176930-5177265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
108, 228
               

               
Conread position:
               
109-447
               

               
Cow position:
               
chr8:25871469-25871812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
32, 260
               

               
Conread position:
               
109-448
               

               
Cow position:
               
chr8:45781921-45781583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
109-448
               

               
Cow position:
               
chr8:51361305-51361645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
109-487
               

               
Cow position:
               
chr8:9131181-9130803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr8:8010648-8011028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
109-497
               

               
Cow position:
               
chr8:45127951-45127570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
109-498
               

               
Cow position:
               
chr8:15569711-15569347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
280, 33
               

               
Conread position:
               
109-501
               

               
Cow position:
               
chr8:580328-579942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr8:11606080-11606504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 186
               

               
Conread position:
               
109-554
               

               
Cow position:
               
chr8:30245079-30244642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
109-557
               

               
Cow position:
               
chr8:26651051-26651483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 85
               

               
Conread position:
               
109-562
               

               
Cow position:
               
chr8:642811-642390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr8:32855058-32854625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr8:35457097-35456629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 175
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr8:39592339-39592801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 5
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr8:46842521-46842065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr8:47342480-47342949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 245
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr8:24371971-24371500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
109-574
               

               
Cow position:
               
chr8:32132998-32133477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
109-576
               

               
Cow position:
               
chr8:538169-537697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr8:10942989-10942521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 177
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr8:56886073-56886518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
251, 30
               

               
Conread position:
               
111-443
               

               
Cow position:
               
chr8:31763069-31762740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
111-571
               

               
Cow position:
               
chr8:54031625-54032084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
112-231
               

               
Cow position:
               
chr8:45287578-45287456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
112-269
               

               
Cow position:
               
chr8:52198244-52198405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
112-295
               

               
Cow position:
               
chr8:16093028-16093210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr8:9962824-9962617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr8:54231049-54231283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
112-352
               

               
Cow position:
               
chr8:1841140-1840899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
112-358
               

               
Cow position:
               
chr8:38789313-38789555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
140, 120
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr8:36398167-36397878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 207
               

               
Conread position:
               
112-446
               

               
Cow position:
               
chr8:8134759-8134416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
103, 262
               

               
Conread position:
               
112-451
               

               
Cow position:
               
chr8:10263414-10263076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
112-492
               

               
Cow position:
               
chr8:50708796-50709182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 378
               

               
Conread position:
               
112-546
               

               
Cow position:
               
chr8:29765004-29765453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
112-563
               

               
Cow position:
               
chr8:18057492-18057931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
112-571
               

               
Cow position:
               
chr8:9942776-9942313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
112-571
               

               
Cow position:
               
chr8:48775564-48776030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 232
               

               
Conread position:
               
112-571
               

               
Cow position:
               
chr8:53606779-53606308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
112-579
               

               
Cow position:
               
chr8:43687289-43687774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 480
               

               
Conread position:
               
112-584
               

               
Cow position:
               
chr8:1297265-1297735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 99
               

               
Conread position:
               
112-584
               

               
Cow position:
               
chr8:10337279-10336823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 174
               

               
Conread position:
               
113-217
               

               
Cow position:
               
chr8:673099-673203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-225
               

               
Cow position:
               
chr8:8916406-8916296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
113-236
               

               
Cow position:
               
chr8:31704349-31704472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 120
               

               
Conread position:
               
113-240
               

               
Cow position:
               
chr8:55711139-55711272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
113-249
               

               
Cow position:
               
chr8:35211405-35211263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
113-253
               

               
Cow position:
               
chr8:44450134-44449993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
113-257
               

               
Cow position:
               
chr8:1833886-1833738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
113-261
               

               
Cow position:
               
chr8:29947795-29947652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
113-271
               

               
Cow position:
               
chr8:12814589-12814756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
113-276
               

               
Cow position:
               
chr8:49940712-49940541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr8:834117-834289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr8:53320726-53320911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr8:55726514-55726346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
113-299
               

               
Cow position:
               
chr8:39321075-39321254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr8:1115042-1114852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
113-304
               

               
Cow position:
               
chr8:3887109-3887307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
113-305
               

               
Cow position:
               
chr8:38855634-38855442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr8:21268773-21268578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr8:54572396-54572596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
113-317
               

               
Cow position:
               
chr8:34599883-34600093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr8:10786232-10786437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
143, 98
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr8:38806704-38806487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-330
               

               
Cow position:
               
chr8:31266437-31266219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
113-332
               

               
Cow position:
               
chr8:48211442-48211220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
113-333
               

               
Cow position:
               
chr8:36055655-36055429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 178
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr8:20311671-20311906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr8:44000738-44000509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr8:50898484-50898716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr8:6021884-6021656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr8:17488825-17488598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr8:4821475-4821242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr8:51318721-51318960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr8:22244017-22244254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr8:36648706-36648467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr8:22103432-22103192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 165
               

               
Conread position:
               
113-349
               

               
Cow position:
               
chr8:31317279-31317534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
113-351
               

               
Cow position:
               
chr8:26837430-26837190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr8:10176394-10176151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
113-353
               

               
Cow position:
               
chr8:48767508-48767752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 218
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr8:21152127-21151882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 223
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr8:18990079-18989834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 234
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr8:24832122-24832367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
38, 235
               

               
Conread position:
               
113-356
               

               
Cow position:
               
chr8:56607447-56607694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 232
               

               
Conread position:
               
113-360
               

               
Cow position:
               
chr8:3680285-3680542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
113-362
               

               
Cow position:
               
chr8:11500405-11500655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
113-362
               

               
Cow position:
               
chr8:45981344-45981603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 254
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr8:6682172-6681914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 225
               

               
Conread position:
               
113-364
               

               
Cow position:
               
chr8:57943599-57943347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr8:43986462-43986208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr8:51444249-51443989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
104, 188
               

               
Conread position:
               
113-399
               

               
Cow position:
               
chr8:48437651-48437364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr8:12303196-12303493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
113-402
               

               
Cow position:
               
chr8:42607519-42607239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
113-405
               

               
Cow position:
               
chr8:20355011-20354733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
113-405
               

               
Cow position:
               
chr8:51579017-51579308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 183
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr8:10699707-10699421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
113-410
               

               
Cow position:
               
chr8:53485456-53485747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
113-412
               

               
Cow position:
               
chr8:39721415-39721719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr8:9517431-9517121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr8:45493631-45493932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
113-422
               

               
Cow position:
               
chr8:60989398-60989695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
113-427
               

               
Cow position:
               
chr8:20355404-20355104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
228, 90
               

               
Conread position:
               
113-427
               

               
Cow position:
               
chr8:43794978-43795291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-434
               

               
Cow position:
               
chr8:18648337-18648013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr8:2166027-2165694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
114, 216
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr8:21941575-21941900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr8:21990304-21990635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 219
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr8:23752615-23752951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 266
               

               
Conread position:
               
113-447
               

               
Cow position:
               
chr8:26922387-26922708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr8:2774535-2774872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 238
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr8:21221953-21222278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
113-450
               

               
Cow position:
               
chr8:23160703-23161037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
113-452
               

               
Cow position:
               
chr8:2814370-2814715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
113-453
               

               
Cow position:
               
chr8:17103669-17103336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
113-456
               

               
Cow position:
               
chr8:1472812-1473157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
113-457
               

               
Cow position:
               
chr8:18415394-18415053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 233
               

               
Conread position:
               
113-465
               

               
Cow position:
               
chr8:554436-554082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 232
               

               
Conread position:
               
113-478
               

               
Cow position:
               
chr8:53363100-53362741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
113-487
               

               
Cow position:
               
chr8:46203036-46203391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
271, 29
               

               
Conread position:
               
113-492
               

               
Cow position:
               
chr8:6076791-6076423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 113
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr8:2904664-2904282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr8:3891676-3891292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 167
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr8:47461614-47461993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
113-499
               

               
Cow position:
               
chr8:28884576-28884972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 202
               

               
Conread position:
               
113-509
               

               
Cow position:
               
chr8:25591568-25591960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 172
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr8:4924313-4924716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 236
               

               
Conread position:
               
113-516
               

               
Cow position:
               
chr8:20306730-20307125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
113-526
               

               
Cow position:
               
chr8:38681629-38682037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
113-542
               

               
Cow position:
               
chr8:47550186-47549764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 222
               

               
Conread position:
               
113-543
               

               
Cow position:
               
chr8:58183559-58183123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 240
               

               
Conread position:
               
113-551
               

               
Cow position:
               
chr8:31775933-31776385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 245
               

               
Conread position:
               
113-555
               

               
Cow position:
               
chr8:15972735-15972293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
113-557
               

               
Cow position:
               
chr8:2164157-2163725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 215
               

               
Conread position:
               
113-557
               

               
Cow position:
               
chr8:15395105-15394662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
113-557
               

               
Cow position:
               
chr8:43903517-43903969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
143, 172
               

               
Conread position:
               
113-558
               

               
Cow position:
               
chr8:1999374-1999829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
113-559
               

               
Cow position:
               
chr8:59477773-59478226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
113-560
               

               
Cow position:
               
chr8:9641103-9641557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 186
               

               
Conread position:
               
113-560
               

               
Cow position:
               
chr8:30324077-30324516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
113-561
               

               
Cow position:
               
chr8:10305056-10305484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 168
               

               
Conread position:
               
113-561
               

               
Cow position:
               
chr8:38358175-38358619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 152
               

               
Conread position:
               
113-562
               

               
Cow position:
               
chr8:61567617-61567171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 148
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr8:2829785-2830240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr8:36375762-36375316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr8:55502343-55502782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 179
               

               
Conread position:
               
113-570
               

               
Cow position:
               
chr8:33407087-33406646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:16297009-16296555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:24980446-24980926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 193
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:25455156-25455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:25628097-25628537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 176
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:28321725-28322183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:35971595-35972059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:37298229-37298688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:39065961-39066439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 171
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:45071124-45071573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
103, 152
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr8:46799553-46799071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 369
               

               
Conread position:
               
113-572
               

               
Cow position:
               
chr8:38861945-38861508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
113-573
               

               
Cow position:
               
chr8:58417441-58417891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr8:6233148-6232684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 233
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr8:12795565-12796038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr8:38665277-38665752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr8:55122705-55122223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
76, 214
               

               
Conread position:
               
113-574
               

               
Cow position:
               
chr8:55716505-55716966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 155
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr8:23111324-23110834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 144
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr8:10081675-10082103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr8:10970577-10971053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 186
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr8:17047012-17046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 234
               

               
Conread position:
               
113-579
               

               
Cow position:
               
chr8:32311594-32312042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
113-581
               

               
Cow position:
               
chr8:28122776-28123274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr8:16938700-16938258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr8:20212757-20212273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr8:38572530-38572047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 314
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr8:38573472-38573014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
113-584
               

               
Cow position:
               
chr8:46480119-46479659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 207
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr8:17199685-17199204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
113-586
               

               
Cow position:
               
chr8:17180276-17179816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 171
               

               
Conread position:
               
113-587
               

               
Cow position:
               
chr8:47752169-47751681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 226
               

               
Conread position:
               
113-588
               

               
Cow position:
               
chr8:24513388-24512919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
114-373
               

               
Cow position:
               
chr8:2881813-2882075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
114-404
               

               
Cow position:
               
chr8:2786715-2787001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
114-439
               

               
Cow position:
               
chr8:11593520-11593187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
113, 258
               

               
Conread position:
               
114-504
               

               
Cow position:
               
chr8:29958178-29958538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
235, 110
               

               
Conread position:
               
115-257
               

               
Cow position:
               
chr8:19204891-19204752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
115-319
               

               
Cow position:
               
chr8:23218067-23218278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr8:27296156-27296485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 216
               

               
Conread position:
               
115-574
               

               
Cow position:
               
chr8:2865659-2866123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
115-585
               

               
Cow position:
               
chr8:34799424-34799915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
116-214
               

               
Cow position:
               
chr8:55323433-55323531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-240
               

               
Cow position:
               
chr8:38851640-38851760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
116-240
               

               
Cow position:
               
chr8:55198644-55198768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
116-257
               

               
Cow position:
               
chr8:33219083-33219226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
116-261
               

               
Cow position:
               
chr8:33814695-33814843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr8:32967328-32967487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
116-271
               

               
Cow position:
               
chr8:22183324-22183486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
116-282
               

               
Cow position:
               
chr8:33584911-33585083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr8:966628-966811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
116-299
               

               
Cow position:
               
chr8:22154304-22154119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 168
               

               
Conread position:
               
116-303
               

               
Cow position:
               
chr8:28670169-28670358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr8:19430088-19429895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
162, 96
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr8:13930734-13930525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
116-321
               

               
Cow position:
               
chr8:39039782-39039990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
116-321
               

               
Cow position:
               
chr8:50949527-50949736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr8:4161274-4161065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr8:38394942-38395156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr8:50429939-50429725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
116-328
               

               
Cow position:
               
chr8:13922185-13922394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
116-334
               

               
Cow position:
               
chr8:56824262-56824044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 192
               

               
Conread position:
               
116-336
               

               
Cow position:
               
chr8:24364182-24363964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr8:36250793-36250564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr8:38464767-38464986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr8:51482035-51481805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-340
               

               
Cow position:
               
chr8:53451265-53451487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 168
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr8:3147785-3147559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr8:19601235-19601469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr8:23108868-23108632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 173
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr8:55208354-55208590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr8:44703843-44704073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr8:46623783-46623555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr8:21961003-21961237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr8:45133273-45133506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 103
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr8:8312284-8312048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 215
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr8:9624518-9624749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr8:9811545-9811790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr8:31313645-31313886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr8:53865856-53866100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr8:39320031-39319794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr8:57045746-57045507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 196
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr8:39936255-39936505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr8:53642670-53642425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:8721702-8721945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 234
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:14628659-14628416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 216
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:14893444-14893205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 211
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:19423089-19422846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 218
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:35291016-35290773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:39739483-39739243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 231
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr8:58229952-58230195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 235
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr8:39968030-39967793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr8:49221474-49221719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
116-360
               

               
Cow position:
               
chr8:9421432-9421183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr8:25249533-25249783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 227
               

               
Conread position:
               
116-362
               

               
Cow position:
               
chr8:47484166-47483920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
116-363
               

               
Cow position:
               
chr8:51856485-51856738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:8970804-8970550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:14587669-14587416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 214
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:16280707-16280957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
104, 181
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:46567798-46567544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:49283879-49283625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 216
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:59257786-59257532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-364
               

               
Cow position:
               
chr8:61195261-61195008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 165
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr8:32491311-32491564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-370
               

               
Cow position:
               
chr8:54195292-54195545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
116-374
               

               
Cow position:
               
chr8:24952087-24952359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
116-375
               

               
Cow position:
               
chr8:34477867-34478132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 227
               

               
Conread position:
               
116-380
               

               
Cow position:
               
chr8:37809874-37809607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-383
               

               
Cow position:
               
chr8:35555816-35555532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
116-384
               

               
Cow position:
               
chr8:31253563-31253834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 231
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr8:4563675-4563402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 225
               

               
Conread position:
               
116-391
               

               
Cow position:
               
chr8:35966280-35966000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-422
               

               
Cow position:
               
chr8:19998329-19998024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
116-429
               

               
Cow position:
               
chr8:35473500-35473818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
96, 215
               

               
Conread position:
               
116-436
               

               
Cow position:
               
chr8:31727261-31727586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr8:18433360-18433042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 131
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr8:45791532-45791205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 215
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr8:60267589-60267915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 202
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:655921-655588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:4690605-4690932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 216
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:7168161-7168488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 214
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:11117516-11117199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:22375982-22375654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
111, 215
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:23470867-23470542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 198
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:27648396-27648720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 169
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:35529879-35530206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:42813567-42813881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:48205957-48206283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 218
               

               
Conread position:
               
116-439
               

               
Cow position:
               
chr8:54011778-54012107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 217
               

               
Conread position:
               
116-441
               

               
Cow position:
               
chr8:16972777-16972446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr8:15479675-15479340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr8:22755777-22756112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 26
               

               
Conread position:
               
116-471
               

               
Cow position:
               
chr8:53822305-53822665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 256
               

               
Conread position:
               
116-487
               

               
Cow position:
               
chr8:11078623-11078984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 222
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr8:49265556-49265177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 374
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr8:55304828-55305206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
116-490
               

               
Cow position:
               
chr8:18207394-18207015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 222
               

               
Conread position:
               
116-493
               

               
Cow position:
               
chr8:33432011-33432390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 180
               

               
Conread position:
               
116-493
               

               
Cow position:
               
chr8:43168271-43167897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
116-497
               

               
Cow position:
               
chr8:4940556-4940186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-498
               

               
Cow position:
               
chr8:24201656-24202053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
116-498
               

               
Cow position:
               
chr8:24471400-24471792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
116-503
               

               
Cow position:
               
chr8:33974327-33974696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 26
               

               
Conread position:
               
116-504
               

               
Cow position:
               
chr8:20339038-20339415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
116-505
               

               
Cow position:
               
chr8:38596458-38596081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
116-548
               

               
Cow position:
               
chr8:24128871-24129317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 173
               

               
Conread position:
               
116-553
               

               
Cow position:
               
chr8:13660787-13661219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
116-554
               

               
Cow position:
               
chr8:60488875-60488446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
116-555
               

               
Cow position:
               
chr8:6074044-6073626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr8:11612300-11612746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 237
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr8:24872115-24871688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
116-557
               

               
Cow position:
               
chr8:53429526-53429962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
116-559
               

               
Cow position:
               
chr8:20564010-20563555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
116-559
               

               
Cow position:
               
chr8:21206636-21207080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
116-561
               

               
Cow position:
               
chr8:57985078-57984648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 157
               

               
Conread position:
               
116-567
               

               
Cow position:
               
chr8:19995977-19995525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
116-567
               

               
Cow position:
               
chr8:58520055-58520491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 26
               

               
Conread position:
               
116-568
               

               
Cow position:
               
chr8:16143879-16144340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
116-569
               

               
Cow position:
               
chr8:61538091-61537641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
116-570
               

               
Cow position:
               
chr8:24867993-24867537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 173
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:1303659-1304117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:19642223-19642677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 229
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:21224314-21223872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:35828052-35827592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:37090329-37089882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 60
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:37310267-37310724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 212
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:41905850-41905410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 63
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:41914758-41914318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 63
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:47328096-47328556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 171
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:52925965-52925522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 232
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:53383158-53383605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 29
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr8:60746397-60746854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
116-572
               

               
Cow position:
               
chr8:48513254-48512815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
116-574
               

               
Cow position:
               
chr8:61157469-61157018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
116-575
               

               
Cow position:
               
chr8:43027902-43027460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
116-576
               

               
Cow position:
               
chr8:23136991-23136522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
116-577
               

               
Cow position:
               
chr8:9169051-9168596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
259, 108
               

               
Conread position:
               
116-578
               

               
Cow position:
               
chr8:47136258-47135806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr8:18730191-18730678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr8:38893760-38894239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
116-581
               

               
Cow position:
               
chr8:47169708-47170165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
116-582
               

               
Cow position:
               
chr8:20080313-20079867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr8:6724588-6724141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr8:8987184-8986706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr8:34258902-34259374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
103, 233
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr8:44664831-44664362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
116-585
               

               
Cow position:
               
chr8:6816919-6816448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
117-253
               

               
Cow position:
               
chr8:59061425-59061563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
117-301
               

               
Cow position:
               
chr8:29917598-29917414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr8:32079931-32079749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr8:797866-798058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
117-345
               

               
Cow position:
               
chr8:3433629-3433861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 159
               

               
Conread position:
               
117-431
               

               
Cow position:
               
chr8:25579295-25579606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
117-465
               

               
Cow position:
               
chr8:32988499-32988844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 214
               

               
Conread position:
               
117-486
               

               
Cow position:
               
chr8:20073408-20073056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
117-499
               

               
Cow position:
               
chr8:53214569-53214189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
117-571
               

               
Cow position:
               
chr8:20783527-20783052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 259
               

               
Conread position:
               
117-574
               

               
Cow position:
               
chr8:29026862-29026446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
118-257
               

               
Cow position:
               
chr8:40030707-40030562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
118-346
               

               
Cow position:
               
chr8:58385425-58385656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr8:29416579-29416343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
118-381
               

               
Cow position:
               
chr8:28412857-28412595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
118-383
               

               
Cow position:
               
chr8:2579902-2579638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
118-384
               

               
Cow position:
               
chr8:17669986-17669716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
118-448
               

               
Cow position:
               
chr8:30135670-30136001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
118-496
               

               
Cow position:
               
chr8:58377805-58377450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
118-558
               

               
Cow position:
               
chr8:41627366-41626916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 231
               

               
Conread position:
               
118-566
               

               
Cow position:
               
chr8:25349463-25349907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 219
               

               
Conread position:
               
118-571
               

               
Cow position:
               
chr8:37571952-37571493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
118-571
               

               
Cow position:
               
chr8:38357095-38356644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 224
               

               
Conread position:
               
119-247
               

               
Cow position:
               
chr8:49691321-49691187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
119-261
               

               
Cow position:
               
chr8:53481216-53481361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
119-295
               

               
Cow position:
               
chr8:37376215-37376033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
119-298
               

               
Cow position:
               
chr8:54269241-54269073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
119-302
               

               
Cow position:
               
chr8:47861182-47860999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
119-303
               

               
Cow position:
               
chr8:18395490-18395665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr8:27152228-27152018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr8:36858344-36858133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr8:5485124-5484894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
119-341
               

               
Cow position:
               
chr8:2953390-2953611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr8:5449115-5448889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr8:36364292-36364067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr8:39985978-39985747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr8:7383612-7383366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 241
               

               
Conread position:
               
119-359
               

               
Cow position:
               
chr8:31958387-31958622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
119-360
               

               
Cow position:
               
chr8:54588079-54588324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 231
               

               
Conread position:
               
119-391
               

               
Cow position:
               
chr8:10802413-10802135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 178
               

               
Conread position:
               
119-407
               

               
Cow position:
               
chr8:55925954-55926245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 155
               

               
Conread position:
               
119-413
               

               
Cow position:
               
chr8:43191269-43190979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
119-437
               

               
Cow position:
               
chr8:24911837-24911514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 212
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr8:47656704-47656385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
119-439
               

               
Cow position:
               
chr8:50926899-50926575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr8:7064516-7064207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr8:9917648-9917963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr8:49687468-49687138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
92, 233
               

               
Conread position:
               
119-446
               

               
Cow position:
               
chr8:33693256-33693590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 239
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr8:13975654-13975976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
119-459
               

               
Cow position:
               
chr8:51445951-51445606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
119-478
               

               
Cow position:
               
chr8:1107434-1107073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
119-482
               

               
Cow position:
               
chr8:39630526-39630892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 200
               

               
Conread position:
               
119-485
               

               
Cow position:
               
chr8:20836883-20837242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
119-486
               

               
Cow position:
               
chr8:33585968-33586337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
119-487
               

               
Cow position:
               
chr8:26228714-26229079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
119-488
               

               
Cow position:
               
chr8:13222086-13221728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
119-492
               

               
Cow position:
               
chr8:43478809-43479163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
267, 82
               

               
Conread position:
               
119-496
               

               
Cow position:
               
chr8:13374300-13374681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 144
               

               
Conread position:
               
119-497
               

               
Cow position:
               
chr8:47665151-47664773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 204
               

               
Conread position:
               
119-500
               

               
Cow position:
               
chr8:21077354-21077722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
119-504
               

               
Cow position:
               
chr8:23179790-23179402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
119-553
               

               
Cow position:
               
chr8:21212574-21212978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
319, 29
               

               
Conread position:
               
119-557
               

               
Cow position:
               
chr8:59766365-59766790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 19
               

               
Conread position:
               
119-558
               

               
Cow position:
               
chr8:59642744-59642295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
119-560
               

               
Cow position:
               
chr8:40033061-40032604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 229
               

               
Conread position:
               
119-562
               

               
Cow position:
               
chr8:35583803-35583374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
190, 23
               

               
Conread position:
               
119-565
               

               
Cow position:
               
chr8:45830643-45831062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
119-566
               

               
Cow position:
               
chr8:15391396-15390963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
119-567
               

               
Cow position:
               
chr8:21219906-21220361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 189
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr8:8324105-8323656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr8:26625630-26626081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr8:43113060-43112641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
212, 28
               

               
Conread position:
               
119-571
               

               
Cow position:
               
chr8:48528196-48527754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 42
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:18831495-18831960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:28185901-28185442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 168
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:29030340-29029864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:38561253-38560789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:44437523-44437965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr8:57218568-57219005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
119-575
               

               
Cow position:
               
chr8:60454951-60455391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
119-577
               

               
Cow position:
               
chr8:42762671-42762219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 92
               

               
Conread position:
               
119-580
               

               
Cow position:
               
chr8:42113046-42112597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
119-581
               

               
Cow position:
               
chr8:21826992-21826519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
119-581
               

               
Cow position:
               
chr8:54052061-54052516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 206
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr8:8924590-8924121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
119-585
               

               
Cow position:
               
chr8:1023716-1024183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
119-585
               

               
Cow position:
               
chr8:46235456-46235930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
119-586
               

               
Cow position:
               
chr8:46952286-46952742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
120-257
               

               
Cow position:
               
chr8:60019934-60019793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
120-295
               

               
Cow position:
               
chr8:54177835-54178007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr8:60774971-60774773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
120-344
               

               
Cow position:
               
chr8:8902213-8901987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 147
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr8:42889376-42889151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
120-355
               

               
Cow position:
               
chr8:8015870-8015631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
120-355
               

               
Cow position:
               
chr8:41697329-41697090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 230
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr8:22031309-22031556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 217
               

               
Conread position:
               
120-384
               

               
Cow position:
               
chr8:58346565-58346823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 104
               

               
Conread position:
               
120-447
               

               
Cow position:
               
chr8:51905288-51904953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
120-535
               

               
Cow position:
               
chr8:10400064-10400471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
120-571
               

               
Cow position:
               
chr8:36606047-36606499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
120-573
               

               
Cow position:
               
chr8:948303-948741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
120-582
               

               
Cow position:
               
chr8:42794553-42794093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
121-319
               

               
Cow position:
               
chr8:10434566-10434766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
121-328
               

               
Cow position:
               
chr8:49720893-49721108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
121-329
               

               
Cow position:
               
chr8:29028324-29028112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
121-332
               

               
Cow position:
               
chr8:25083027-25083247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 193
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr8:26600323-26600523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
121-335
               

               
Cow position:
               
chr8:45664532-45664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 206
               

               
Conread position:
               
121-338
               

               
Cow position:
               
chr8:38973444-38973668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 202
               

               
Conread position:
               
121-339
               

               
Cow position:
               
chr8:3149944-3149724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
121-343
               

               
Cow position:
               
chr8:24933910-24934135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
121-348
               

               
Cow position:
               
chr8:27368861-27369079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
121-383
               

               
Cow position:
               
chr8:56581441-56581187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
121-446
               

               
Cow position:
               
chr8:32984350-32984018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
121-458
               

               
Cow position:
               
chr8:33400433-33400116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 25
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr8:9705364-9705718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
121-498
               

               
Cow position:
               
chr8:48955673-48956076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 357
               

               
Conread position:
               
121-505
               

               
Cow position:
               
chr8:59656427-59656051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
121-559
               

               
Cow position:
               
chr8:18081294-18081726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 146
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr8:32621239-32620769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 355
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr8:46964473-46964948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 185
               

               
Conread position:
               
121-574
               

               
Cow position:
               
chr8:37122729-37123160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 220
               

               
Conread position:
               
121-575
               

               
Cow position:
               
chr8:28229714-28229262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 180
               

               
Conread position:
               
121-576
               

               
Cow position:
               
chr8:27661619-27662072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
121-579
               

               
Cow position:
               
chr8:12058471-12058944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
122-304
               

               
Cow position:
               
chr8:4559297-4559117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr8:42575451-42575673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
122-346
               

               
Cow position:
               
chr8:51959647-51959416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
122-354
               

               
Cow position:
               
chr8:16030459-16030222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
122-355
               

               
Cow position:
               
chr8:9845085-9844851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 194
               

               
Conread position:
               
122-363
               

               
Cow position:
               
chr8:42578315-42578077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
122-485
               

               
Cow position:
               
chr8:3704381-3704745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 98
               
UCSC Genome Browser

               
Conread position:
               
122-498
               

               
Cow position:
               
chr8:20158001-20157626 (view  custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 16
               
UCSC Genome Browser

               
               
               
Conread position:
122-532

               
               
               
Cow position:
chr8:9315669-9316077 (view  custom track)

               
               
               
Alignm length:
420

               
               
               
Alignm identity:
289

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
136, 178
UCSC Genome Browser

               
               
               
Conread position:
122-548

               
               
               
Cow position:
chr8:1252712-1253149 (view  custom track)

               
               
               
Alignm length:
440

               
               
               
Alignm identity:
295

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
96, 130

               
               
               Conread position:122-561
               
               
               Cow position:chr8:43858293-43857857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):133, 73

               
               
               Conread position:122-571
               
               
               Cow position:chr8:16653165-16653643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:486
               
               
               Alignm identity:340
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):78, 175

               
               
               Conread position:122-571
               
               
               Cow position:chr8:55898032-55897608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:332
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):262, 69

               
               
               Conread position:123-384
               
               
               Cow position:chr8:4205684-4205946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:192
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):18, 123

               
               
               Conread position:123-574
               
               
               Cow position:chr8:39442231-39442702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:478
               
               
               Alignm identity:304
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):94, 226

               
               
               Conread position:124-339
               
               
               Cow position:chr8:47665932-47665717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):134, 79

               
               
               Conread position:124-348
               
               
               Cow position:chr8:21078297-21078525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):85, 162

               
               
               Conread position:124-433
               
               
               Cow position:chr8:60320283-60320593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):17, 141

               
               
               Conread position:124-577
               
               
               Cow position:chr8:23030197-23030642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:309
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):139, 32

               
               
               Conread position:125-370
               
               
               Cow position:chr8:24834489-24834723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):223, 136

               
               
               Conread position:125-384
               
               
               Cow position:chr8:20384553-20384801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:178
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):204, 17

               
               
               Conread position:125-439
               
               
               Cow position:chr8:18762931-18763251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):94, 156

               
               
               Conread position:125-448
               
               
               Cow position:chr8:28295083-28294761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 153

               
               
               Conread position:125-454
               
               
               Cow position:chr8:40888437-40888109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:225
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):68, 7

               
               
               Conread position:125-508
               
               
               Cow position:chr8:60463278-60463651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 209

               
               
               Conread position:125-512
               
               
               Cow position:chr8:58875838-58876220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):207, 104

               
               
               Conread position:125-563
               
               
               Cow position:chr8:39845395-39845807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:442
               
               
               Alignm identity:291
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):20, 57

               
               
               Conread position:125-585
               
               
               Cow position:chr8:18017274-18017744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:477
               
               
               Alignm identity:328
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 228

               
               
               Conread position:125-585
               
               
               Cow position:chr8:20108021-20107572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:466
               
               
               Alignm identity:348
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 17

               
               
               Conread position:126-373
               
               
               Cow position:chr8:53587705-53587452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:187
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):41, 62

               
               
               Conread position:126-490
               
               
               Cow position:chr8:29625201-29624841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):24, 149

               
               
               Conread position:127-329
               
               
               Cow position:chr8:34400711-34400913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):89, 48

               
               
               Conread position:127-340
               
               
               Cow position:chr8:1834685-1834902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:174
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:127-343
               
               
               Cow position:chr8:1596408-1596187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:127-344
               
               
               Cow position:chr8:33286934-33287144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):32, 18

               
               
               Conread position:127-347
               
               
               Cow position:chr8:23026467-23026685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):77, 117

               
               
               Conread position:127-347
               
               
               Cow position:chr8:40743587-40743365 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):18, 108

               
               
               Conread position:127-348
               
               
               Cow position:chr8:11590696-11590914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):85, 15

               
               
               Conread position:127-348
               
               
               Cow position:chr8:45686664-45686447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:156
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):61, 15

               
               
               Conread position:127-358
               
               
               Cow position:chr8:28509728-28509492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):85, 158

               
               
               Conread position:127-363
               
               
               Cow position:chr8:34410217-34410452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):84, 21

               
               
               Conread position:127-364
               
               
               Cow position:chr8:59547265-59547024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):71, 202

               
               
               Conread position:127-373
               
               
               Cow position:chr8:6417456-6417213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):97, 167

               
               
               Conread position:127-384
               
               
               Cow position:chr8:16053307-16053556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):83, 28

               
               
               Conread position:127-415
               
               
               Cow position:chr8:225601-225314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):88, 102

               
               
               Conread position:127-448
               
               
               Cow position:chr8:14947541-14947210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:231
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):85, 5

               
               
               Conread position:127-459
               
               
               Cow position:chr8:26386452-26386119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):113, 84

               
               
               Conread position:127-496
               
               
               Cow position:chr8:1169504-1169154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:250
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):212, 15

               
               
               Conread position:127-500
               
               
               Cow position:chr8:57389052-57389421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 240

               
               
               Conread position:127-512
               
               
               Cow position:chr8:7149922-7149551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:261
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):129, 70

               
               
               Conread position:127-561
               
               
               Cow position:chr8:55360329-55360758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 169

               
               
               Conread position:127-570
               
               
               Cow position:chr8:59250490-59250933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:335
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):76, 7

               
               
               Conread position:127-571
               
               
               Cow position:chr8:8668434-8667975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:463
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 73

               
               
               Conread position:127-571
               
               
               Cow position:chr8:45878808-45879237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):125, 83

               
               
               Conread position:127-571
               
               
               Cow position:chr8:45925390-45925819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):125, 83

               
               
               Conread position:127-578
               
               
               Cow position:chr8:37215202-37215644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 64

               
               
               Conread position:127-584
               
               
               Cow position:chr8:45687906-45687454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:318
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 84

               
               
               Conread position:127-585
               
               
               Cow position:chr8:53229798-53230240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:463
               
               
               Alignm identity:320
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):203, 22

               
               
               Conread position:128-229
               
               
               Cow position:chr8:18290299-18290196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:104
               
               
               Alignm identity:86
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:128-347
               
               
               Cow position:chr8:39144527-39144737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:172
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):200, 84

               
               
               Conread position:128-561
               
               
               Cow position:chr8:51402733-51403159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:310
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):84, 160

               
               
               Conread position:128-570
               
               
               Cow position:chr8:20034146-20033708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:305
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):81, 6

               
               
               Conread position:128-576
               
               
               Cow position:chr8:2897856-2897387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:472
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):86, 110

               
               
               Conread position:129-340
               
               
               Cow position:chr8:24546297-24546504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):16, 85

               
               
               Conread position:129-344
               
               
               Cow position:chr8:37604244-37604024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):86, 9

               
               
               Conread position:129-345
               
               
               Cow position:chr8:29947381-29947174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):87, 13

               
               
               Conread position:129-345
               
               
               Cow position:chr8:51862018-51862217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:162
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):86, 13

               
               
               Conread position:129-360
               
               
               Cow position:chr8:33993930-33994160 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 63

               
               
               Conread position:129-389
               
               
               Cow position:chr8:32295973-32295701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 231

               
               
               Conread position:129-439
               
               
               Cow position:chr8:12310332-12310017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):65, 202

               
               
               Conread position:129-443
               
               
               Cow position:chr8:10297973-10297656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 220

               
               
               Conread position:129-451
               
               
               Cow position:chr8:24390433-24390107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 244

               
               
               Conread position:129-459
               
               
               Cow position:chr8:20683738-20684069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 60

               
               
               Conread position:130-351
               
               
               Cow position:chr8:783943-783716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):72, 44

               
               
               Conread position:130-374
               
               
               Cow position:chr8:53964973-53964735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):126, 85

               
               
               Conread position:130-374
               
               
               Cow position:chr8:54305849-54306090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):27, 95

               
               
               Conread position:130-478
               
               
               Cow position:chr8:53558836-53558493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 71

               
               
               Conread position:130-577
               
               
               Cow position:chr8:59131633-59131183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:463
               
               
               Alignm identity:311
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):86, 43

               
               
               Conread position:131-548
               
               
               Cow position:chr8:36249653-36249231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 164

               
               
               Conread position:132-300
               
               
               Cow position:chr8:844171-843998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:138
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):84, 10

               
               
               Conread position:132-319
               
               
               Cow position:chr8:50957557-50957375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):34, 72

               
               
               Conread position:132-344
               
               
               Cow position:chr8:52195690-52195902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):84, 10

               
               
               Conread position:132-345
               
               
               Cow position:chr8:50937552-50937769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):72, 10

               
               
               Conread position:132-477
               
               
               Cow position:chr8:31646238-31645907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:233
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):81, 200

               
               
               Conread position:132-487
               
               
               Cow position:chr8:45245249-45244904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:255
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):78, 150

               
               
               Conread position:132-540
               
               
               Cow position:chr8:9461436-9461020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:275
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):87, 212

               
               
               Conread position:132-548
               
               
               Cow position:chr8:1666279-1665885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:285
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):190, 69

               
               
               Conread position:132-552
               
               
               Cow position:chr8:8967568-8967982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:278
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):84, 128

               
               
               Conread position:132-570
               
               
               Cow position:chr8:24498017-24498459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:294
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):84, 188

               
               
               Conread position:132-574
               
               
               Cow position:chr8:3446314-3445884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):174, 10

               
               
               Conread position:132-577
               
               
               Cow position:chr8:37167520-37167960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:300
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):128, 43

               
               
               Conread position:132-584
               
               
               Cow position:chr8:30418810-30419271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:470
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):82, 141

               
               
               Conread position:133-312
               
               
               Cow position:chr8:11593842-11594020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):83, 12

               
               
               Conread position:134-323
               
               
               Cow position:chr8:54325503-54325691 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):74, 51

               
               
               Conread position:134-347
               
               
               Cow position:chr8:36464975-36465196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:170
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:134-354
               
               
               Cow position:chr8:19818350-19818130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:175
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 151

               
               
               Conread position:134-439
               
               
               Cow position:chr8:8313215-8312906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):86, 201

               
               
               Conread position:134-480
               
               
               Cow position:chr8:16031799-16031461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):250, 21

               
               
               Conread position:134-555
               
               
               Cow position:chr8:33849424-33849829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:279
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):79, 148

               
               
               Conread position:135-345
               
               
               Cow position:chr8:56248739-56248966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):43, 10

               
               
               Conread position:135-493
               
               
               Cow position:chr8:35990818-35991183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 149

               
               
               Conread position:136-246
               
               
               Cow position:chr8:20348151-20348044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:91
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:136-439
               
               
               Cow position:chr8:59043329-59043021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 218

               
               
               Conread position:136-465
               
               
               Cow position:chr8:5225264-5224942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):76, 63

               
               
               Conread position:136-552
               
               
               Cow position:chr8:47750721-47750310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:281
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):11, 109

               
               
               Conread position:136-568
               
               
               Cow position:chr8:3975992-3976438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):76, 16

               
               
               Conread position:136-571
               
               
               Cow position:chr8:20926864-20926416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):123, 75

               
               
               Conread position:136-575
               
               
               Cow position:chr8:1135749-1135311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:293
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):60, 183

               
               
               Conread position:137-340
               
               
               Cow position:chr8:53929809-53929602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):26, 85

               
               
               Conread position:138-306
               
               
               Cow position:chr8:46743558-46743392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):116, 9

               
               
               Conread position:138-343
               
               
               Cow position:chr8:25572827-25573036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:138-391
               
               
               Cow position:chr8:39555751-39556012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):10, 158

               
               
               Conread position:138-451
               
               
               Cow position:chr8:21382920-21382602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:138-459
               
               
               Cow position:chr8:5979719-5980039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 7

               
               
               Conread position:138-548
               
               
               Cow position:chr8:5934270-5933848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 98

               
               
               Conread position:138-557
               
               
               Cow position:chr8:50311073-50310656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:292
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):13, 66

               
               
               Conread position:138-571
               
               
               Cow position:chr8:35504461-35504011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):78, 173

               
               
               Conread position:138-584
               
               
               Cow position:chr8:54302811-54303236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:328
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):255, 25

               
               
               Conread position:139-290
               
               
               Cow position:chr8:24234903-24235061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:139-459
               
               
               Cow position:chr8:669790-669468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):122, 58

               
               
               Conread position:139-574
               
               
               Cow position:chr8:11278339-11277892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:297
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):84, 32

               
               
               Conread position:139-574
               
               
               Cow position:chr8:20102996-20102550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:306
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):77, 167

               
               
               Conread position:140-345
               
               
               Cow position:chr8:41264083-41264290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):76, 146

               
               
               Conread position:140-486
               
               
               Cow position:chr8:36505142-36505499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:245
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):18, 219

               
               
               Conread position:140-556
               
               
               Cow position:chr8:10456244-10456657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):199, 209

               
               
               Conread position:140-571
               
               
               Cow position:chr8:39425938-39426390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:299
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):18, 12

               
               
               Conread position:140-571
               
               
               Cow position:chr8:42145996-42145556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 5

               
               
               Conread position:140-574
               
               
               Cow position:chr8:22273633-22274076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 213

               
               
               Conread position:141-406
               
               
               Cow position:chr8:45690123-45689855 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):75, 50

               
               
               Conread position:141-546
               
               
               Cow position:chr8:16487529-16487110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:280
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):117, 201

               
               
               Conread position:142-336
               
               
               Cow position:chr8:1327213-1327407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):74, 22

               
               
               Conread position:142-344
               
               
               Cow position:chr8:48763339-48763539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):80, 134

               
               
               Conread position:142-346
               
               
               Cow position:chr8:20111890-20112103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):87, 21

               
               
               Conread position:142-488
               
               
               Cow position:chr8:34287705-34288045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:238
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):73, 125

               
               
               Conread position:142-561
               
               
               Cow position:chr8:1187709-1188113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:290
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):115, 35

               
               
               Conread position:142-562
               
               
               Cow position:chr8:8097491-8097064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 104

               
               
               Conread position:142-567
               
               
               Cow position:chr8:9681623-9681220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:281
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):118, 73

               
               
               Conread position:142-571
               
               
               Cow position:chr8:47890041-47890464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:281
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):48, 121

               
               
               Conread position:143-295
               
               
               Cow position:chr8:24905274-24905433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:143-383
               
               
               Cow position:chr8:4591293-4591052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:184
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):73, 200

               
               
               Conread position:144-583
               
               
               Cow position:chr8:32461026-32460582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:282
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):72, 202

               
               
               Conread position:145-338
               
               
               Cow position:chr8:51493249-51493053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):71, 189

               
               
               Conread position:147-383
               
               
               Cow position:chr8:37147903-37148142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:180
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):68, 195

               
               
               Conread position:147-581
               
               
               Cow position:chr8:1620940-1620504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 12

               
               
               Conread position:149-384
               
               
               Cow position:chr8:16023858-16023618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):66, 132

               
               
               Conread position:149-448
               
               
               Cow position:chr8:51695014-51694728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):109, 50

               
               
               Conread position:149-568
               
               
               Cow position:chr8:31297054-31297473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:431
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 26

               
               
               Conread position:149-575
               
               
               Cow position:chr8:4796569-4796960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:293
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):73, 119

               
               
               Conread position:152-571
               
               
               Cow position:chr8:24329058-24328637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 54

               
               
               Conread position:153-386
               
               
               Cow position:chr8:47679204-47679441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):70, 128

               
               
               Conread position:153-571
               
               
               Cow position:chr8:39181983-39181564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 205

               
               
               Conread position:154-571
               
               
               Cow position:chr8:4500279-4500698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 20

               
               
               Conread position:156-346
               
               
               Cow position:chr8:37433414-37433611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:150
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:156-410
               
               
               Cow position:chr8:59438491-59438232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:179
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):59, 111

               
               
               Conread position:156-448
               
               
               Cow position:chr8:31690594-31690895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):60, 216

               
               
               Conread position:157-354
               
               
               Cow position:chr8:59751456-59751252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):67, 186

               
               
               Conread position:157-500
               
               
               Cow position:chr8:32093676-32094011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):229, 54

               
               
               Conread position:158-346
               
               
               Cow position:chr8:21221045-21221235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:158-347
               
               
               Cow position:chr8:16215632-16215824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:158-500
               
               
               Cow position:chr8:6485141-6484795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 321

               
               
               Conread position:158-509
               
               
               Cow position:chr8:36823406-36823055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:245
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):97, 17

               
               
               Conread position:158-523
               
               
               Cow position:chr8:45072122-45071750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:246
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):65, 143

               
               
               Conread position:159-336
               
               
               Cow position:chr8:11217273-11217086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:141
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:159-442
               
               
               Cow position:chr8:57208684-57208398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):53, 127

               
               
               Conread position:159-504
               
               
               Cow position:chr8:6531213-6531555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 85

               
               
               Conread position:160-352
               
               
               Cow position:chr8:28221771-28221573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:161-448
               
               
               Cow position:chr8:50266093-50266375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):28, 72

               
               
               Conread position:161-574
               
               
               Cow position:chr8:15694682-15694265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:431
               
               
               Alignm identity:290
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):58, 77

               
               
               Conread position:162-557
               
               
               Cow position:chr8:57406562-57406964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:269
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):26, 101

               
               
               Conread position:163-448
               
               
               Cow position:chr8:57042020-57041744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:214
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):61, 10

               
               
               Conread position:163-555
               
               
               Cow position:chr8:57397732-57397336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:411
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 116

               
               
               Conread position:163-584
               
               
               Cow position:chr8:1011776-1012184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:283
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):51, 154

               
               
               Conread position:164-571
               
               
               Cow position:chr8:18869686-18870094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:272
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):10, 137

               
               
               Conread position:165-484
               
               
               Cow position:chr8:26304600-26304269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:222
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):54, 182

               
               
               Conread position:165-584
               
               
               Cow position:chr8:27138987-27138577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:287
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):43, 38

               
               
               Conread position:165-587
               
               
               Cow position:chr8:8190267-8189830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:167-336
               
               
               Cow position:chr8:39544578-39544760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:168-459
               
               
               Cow position:chr8:30893194-30892905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):93, 11

               
               
               Conread position:168-498
               
               
               Cow position:chr8:39174445-39174108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:252
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 323

               
               
               Conread position:168-571
               
               
               Cow position:chr8:23018709-23018306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 138

               
               
               Conread position:169-550
               
               
               Cow position:chr8:37173267-37172869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:274
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):55, 119

               
               
               Conread position:171-488
               
               
               Cow position:chr8:30463200-30463524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):37, 126

               
               
               Conread position:172-498
               
               
               Cow position:chr8:28987513-28987835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 19

               
               
               Conread position:175-423
               
               
               Cow position:chr8:39100653-39100906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):45, 167

               
               
               Conread position:175-506
               
               
               Cow position:chr8:28313913-28313578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 22

               
               
               Conread position:176-357
               
               
               Cow position:chr8:60353523-60353714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:176-379
               
               
               Cow position:chr8:8714385-8714582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):58, 106

               
               
               Conread position:176-574
               
               
               Cow position:chr8:61128893-61128488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:279
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):51, 178

               
               
               Conread position:177-585
               
               
               Cow position:chr8:48482996-48482576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:280
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):79, 15

               
               
               Conread position:178-498
               
               
               Cow position:chr8:19011975-19011659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):207, 27

               
               
               Conread position:178-560
               
               
               Cow position:chr8:19980265-19979888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 103

               
               
               Conread position:178-571
               
               
               Cow position:chr8:6951342-6951727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 109

               
               
               Conread position:178-573
               
               
               Cow position:chr8:39807412-39807814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 7

               
               
               Conread position:179-569
               
               
               Cow position:chr8:43439422-43439814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 128

               
               
               Conread position:181-373
               
               
               Cow position:chr8:6184656-6184460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:142
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):28, 156

               
               
               Conread position:181-415
               
               
               Cow position:chr8:14919103-14919337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):48, 158

               
               
               Conread position:181-566
               
               
               Cow position:chr8:47284246-47283862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:267
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):74, 112

               
               
               Conread position:181-579
               
               
               Cow position:chr8:12213829-12214217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 143

               
               
               Conread position:182-339
               
               
               Cow position:chr8:11135433-11135282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:122
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):78, 24

               
               
               Conread position:182-570
               
               
               Cow position:chr8:54437196-54436801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:277
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):17, 107

               
               
               Conread position:182-579
               
               
               Cow position:chr8:27608271-27608686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:277
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):45, 53

               
               
               Conread position:183-512
               
               
               Cow position:chr8:3922911-3922566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:236
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):33, 167

               
               
               Conread position:183-533
               
               
               Cow position:chr8:5893763-5894108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 169

               
               
               Conread position:183-560
               
               
               Cow position:chr8:20150741-20150362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:258
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):33, 95

               
               
               Conread position:187-453
               
               
               Cow position:chr8:37192195-37192455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:196
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):197, 152

               
               
               Conread position:187-552
               
               
               Cow position:chr8:60126676-60127037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:241
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):29, 145

               
               
               Conread position:187-563
               
               
               Cow position:chr8:23586128-23585759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:258
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):68, 15

               
               
               Conread position:188-498
               
               
               Cow position:chr8:45287453-45287165 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):196, 17

               
               
               Conread position:191-312
               
               
               Cow position:chr8:8752166-8752287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):25, 95

               
               
               Conread position:191-338
               
               
               Cow position:chr8:5910152-5910301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:110
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:191-347
               
               
               Cow position:chr8:35596931-35596771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:191-384
               
               
               Cow position:chr8:6674977-6675169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):7, 37

               
               
               Conread position:193-536
               
               
               Cow position:chr8:35769343-35769689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:231
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):25, 100

               
               
               Conread position:193-574
               
               
               Cow position:chr8:55884806-55885185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):146, 15

               
               
               Conread position:193-586
               
               
               Cow position:chr8:9510059-9509673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:259
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):23, 106

               
               
               Conread position:195-567
               
               
               Cow position:chr8:19717260-19716910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 17

               
               
               Conread position:197-575
               
               
               Cow position:chr8:38137254-38137620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:245
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):19, 185

               
               
               Conread position:198-384
               
               
               Cow position:chr8:46616248-46616431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):13, 121

               
               
               Conread position:198-571
               
               
               Cow position:chr8:3579299-3578932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:257
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):62, 13

               
               
               Conread position:198-571
               
               
               Cow position:chr8:29150036-29149652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:256
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):15, 158

               
               
               Conread position:199-562
               
               
               Cow position:chr8:20091148-20091513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:245
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):17, 146

               
               
               Conread position:199-577
               
               
               Cow position:chr8:53633393-53633023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:262
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):56, 164

               
               
               Conread position:200-436
               
               
               Cow position:chr8:37582249-37582025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):184, 10

               
               
               Conread position:201-354
               
               
               Cow position:chr8:44882783-44882939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:201-439
               
               
               Cow position:chr8:41900801-41900567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):59, 176

               
               
               Conread position:206-584
               
               
               Cow position:chr8:27730885-27731262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:256
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):10, 57

               
               
               Conread position:207-585
               
               
               Cow position:chr8:37292241-37291864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:263
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):17, 102

               
               
               Conread position:209-472
               
               
               Cow position:chr8:53948570-53948317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):175, 18

               
               
               Conread position:211-442
               
               
               Cow position:chr8:45777937-45777707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:156
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):45, 124

               
               
               Conread position:212-339
               
               
               Cow position:chr8:54061125-54061252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:103
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:212-356
               
               
               Cow position:chr8:3872265-3872120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):129, 0

               
               
               Conread position:212-498
               
               
               Cow position:chr8:8577688-8577965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:204
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):174, 86

               
               
               Conread position:212-501
               
               
               Cow position:chr8:2931844-2931564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:212
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):170, 77

               
               
               Conread position:212-532
               
               
               Cow position:chr8:37882197-37882515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:213
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):43, 20

               
               
               Conread position:212-533
               
               
               Cow position:chr8:9906965-9907291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):44, 100

               
               
               Conread position:212-567
               
               
               Cow position:chr8:37347605-37347243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:247
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):49, 30

               
               
               Conread position:212-569
               
               
               Cow position:chr8:19284353-19284709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 34

               
               
               Conread position:212-570
               
               
               Cow position:chr8:37636136-37635787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):177, 20

               
               
               Conread position:212-571
               
               
               Cow position:chr8:34769356-34769708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:257
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):43, 16

               
               
               Conread position:212-574
               
               
               Cow position:chr8:35519880-35520227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:237
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):119, 251

               
               
               Conread position:212-575
               
               
               Cow position:chr8:53338809-53338458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:254
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):118, 62

               
               
               Conread position:212-581
               
               
               Cow position:chr8:26008731-26009105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:256
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):43, 90

               
               
               Conread position:212-584
               
               
               Cow position:chr8:40280539-40280910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 80

               
               
               Conread position:213-454
               
               
               Cow position:chr8:11782834-11783077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):141, 46

               
               
               Conread position:214-306
               
               
               Cow position:chr8:44558421-44558330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:93
               
               
               Alignm identity:79
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:214-568
               
               
               Cow position:chr8:935560-935913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:238
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):51, 130

               
               
               Conread position:214-571
               
               
               Cow position:chr8:15187107-15187460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):42, 100

               
               
               Conread position:214-571
               
               
               Cow position:chr8:38711454-38711797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):182, 45

               
               
               Conread position:214-575
               
               
               Cow position:chr8:35563184-35563563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 262

               
               
               Conread position:215-456
               
               
               Cow position:chr8:637917-638150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):119, 66

               
               
               Conread position:215-570
               
               
               Cow position:chr8:16060942-16061282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:249
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):273, 32

               
               
               Conread position:220-441
               
               
               Cow position:chr8:58171295-58171513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):127, 39

               
               
               Conread position:220-504
               
               
               Cow position:chr8:12798791-12799063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):115, 61

               
               
               Conread position:221-567
               
               
               Cow position:chr8:21858845-21858504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):271, 26

               
               
               Conread position:221-583
               
               
               Cow position:chr8:11927011-11927358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:271
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):267, 83

               
               
               Conread position:222-342
               
               
               Cow position:chr8:51480969-51480848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:97
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):105, 0

               
               
               Conread position:222-584
               
               
               Cow position:chr8:11964160-11964516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:236
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):21, 76

               
               
               Conread position:224-535
               
               
               Cow position:chr8:45447239-45446928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 219

               
               
               Conread position:224-551
               
               
               Cow position:chr8:19546648-19546983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):32, 109

               
               
               Conread position:224-581
               
               
               Cow position:chr8:37391494-37391139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):129, 65

               
               
               Conread position:227-453
               
               
               Cow position:chr8:40143988-40143761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:160
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):34, 22

               
               
               Conread position:227-576
               
               
               Cow position:chr8:25388008-25388369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:242
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):158, 105

               
               
               Conread position:229-444
               
               
               Cow position:chr8:37334040-37334254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):101, 87

               
               
               Conread position:230-373
               
               
               Cow position:chr8:31704492-31704636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):30, 103

               
               
               Conread position:232-566
               
               
               Cow position:chr8:33640234-33640568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):113, 7

               
               
               Conread position:233-488
               
               
               Cow position:chr8:37862450-37862697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):28, 110

               
               
               Conread position:234-344
               
               
               Cow position:chr8:56507414-56507304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:90
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):96, 30

               
               
               Conread position:234-391
               
               
               Cow position:chr8:19975943-19975784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:234-448
               
               
               Cow position:chr8:35211050-35210847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):93, 74

               
               
               Conread position:237-476
               
               
               Cow position:chr8:5866952-5867194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):93, 71

               
               
               Conread position:237-519
               
               
               Cow position:chr8:4649012-4648729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):146, 0

               
               
               Conread position:237-571
               
               
               Cow position:chr8:58058617-58058951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):146, 308

               
               
               Conread position:238-579
               
               
               Cow position:chr8:6193846-6194199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:233
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):22, 253

               
               
               Conread position:239-584
               
               
               Cow position:chr8:28228125-28228462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):15, 60

               
               
               Conread position:244-454
               
               
               Cow position:chr8:43227855-43228065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):86, 106

               
               
               Conread position:244-498
               
               
               Cow position:chr8:54147547-54147800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):92, 74

               
               
               Conread position:245-567
               
               
               Cow position:chr8:834294-834619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:236
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):46, 113

               
               
               Conread position:246-582
               
               
               Cow position:chr8:19475201-19474859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:232
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):72, 106

               
               
               Conread position:247-569
               
               
               Cow position:chr8:52657058-52657367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:218
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):5, 88

               
               
               Conread position:248-571
               
               
               Cow position:chr8:19204558-19204233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:216
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):13, 47

               
               
               Conread position:248-574
               
               
               Cow position:chr8:6224548-6224229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 25

               
               
               Conread position:248-581
               
               
               Cow position:chr8:44449710-44449386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):138, 54

               
               
               Conread position:250-502
               
               
               Cow position:chr8:13723298-13723545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):80, 94

               
               
               Conread position:250-576
               
               
               Cow position:chr8:54177824-54177498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:220
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):80, 93

               
               
               Conread position:252-498
               
               
               Cow position:chr8:14383298-14383051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):130, 71

               
               
               Conread position:252-574
               
               
               Cow position:chr8:9401814-9402141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:220
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):123, 91

               
               
               Conread position:253-410
               
               
               Cow position:chr8:32967679-32967836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):130, 95

               
               
               Conread position:254-493
               
               
               Cow position:chr8:53481701-53481944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):83, 51

               
               
               Conread position:254-557
               
               
               Cow position:chr8:36768367-36768674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):131, 95

               
               
               Conread position:254-568
               
               
               Cow position:chr8:46874447-46874757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):126, 94

               
               
               Conread position:254-574
               
               
               Cow position:chr8:27955258-27954939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 40

               
               
               Conread position:255-574
               
               
               Cow position:chr8:31985159-31985470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):129, 29

               
               
               Conread position:258-576
               
               
               Cow position:chr8:55901130-55900810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):72, 130

               
               
               Conread position:261-584
               
               
               Cow position:chr8:20052050-20052374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):124, 85

               
               
               Conread position:263-465
               
               
               Cow position:chr8:55871800-55871592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:263-585
               
               
               Cow position:chr8:46082069-46082390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):123, 146

               
               
               Conread position:264-498
               
               
               Cow position:chr8:40579509-40579279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):121, 81

               
               
               Conread position:264-581
               
               
               Cow position:chr8:41722279-41721970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:222
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):121, 37

               
               
               Conread position:264-584
               
               
               Cow position:chr8:49305841-49305525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):228, 19

               
               
               Conread position:264-585
               
               
               Cow position:chr8:52197556-52197230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:223
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):83, 91

               
               
               Conread position:265-571
               
               
               Cow position:chr8:4203950-4203641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:212
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):99, 65

               
               
               Conread position:265-583
               
               
               Cow position:chr8:53552582-53552895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:216
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):120, 66

               
               
               Conread position:266-422
               
               
               Cow position:chr8:12814789-12814945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):118, 70

               
               
               Conread position:266-512
               
               
               Cow position:chr8:17167471-17167722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):67, 48

               
               
               Conread position:266-562
               
               
               Cow position:chr8:6661505-6661205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):67, 83

               
               
               Conread position:267-440
               
               
               Cow position:chr8:1182969-1183139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):118, 69

               
               
               Conread position:267-581
               
               
               Cow position:chr8:20911182-20910856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:225
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):44, 287

               
               
               Conread position:268-584
               
               
               Cow position:chr8:47412828-47413145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:212
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):118, 82

               
               
               Conread position:269-477
               
               
               Cow position:chr8:35523710-35523501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):18, 41

               
               
               Conread position:269-567
               
               
               Cow position:chr8:16957538-16957817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:215
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):117, 15

               
               
               Conread position:271-584
               
               
               Cow position:chr8:26305954-26305639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:216
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):101, 25

               
               
               Conread position:271-585
               
               
               Cow position:chr8:6910250-6909939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):114, 88

               
               
               Conread position:275-574
               
               
               Cow position:chr8:4524998-4525289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):110, 66

               
               
               Conread position:276-492
               
               
               Cow position:chr8:45126325-45126107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):24, 16

               
               
               Conread position:278-554
               
               
               Cow position:chr8:36493367-36493648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):9, 73

               
               
               Conread position:279-571
               
               
               Cow position:chr8:43940982-43940687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):96, 58

               
               
               Conread position:281-565
               
               
               Cow position:chr8:20657443-20657176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:197
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):54, 70

               
               
               Conread position:281-570
               
               
               Cow position:chr8:18728705-18728993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:208
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):60, 74

               
               
               Conread position:284-488
               
               
               Cow position:chr8:15856893-15857099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:155
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:284-570
               
               
               Cow position:chr8:26284932-26284645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:205
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):106, 45

               
               
               Conread position:284-571
               
               
               Cow position:chr8:4992482-4992760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):106, 25

               
               
               Conread position:285-557
               
               
               Cow position:chr8:45859732-45860007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):49, 63

               
               
               Conread position:286-570
               
               
               Cow position:chr8:32130161-32130440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 33

               
               
               Conread position:286-571
               
               
               Cow position:chr8:20851349-20851059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:189
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):66, 43

               
               
               Conread position:288-557
               
               
               Cow position:chr8:20320419-20320682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):97, 55

               
               
               Conread position:288-574
               
               
               Cow position:chr8:21911565-21911856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):97, 56

               
               
               Conread position:289-576
               
               
               Cow position:chr8:8916027-8915740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):96, 42

               
               
               Conread position:290-571
               
               
               Cow position:chr8:51523940-51524217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):182, 64

               
               
               Conread position:291-557
               
               
               Cow position:chr8:41219257-41219525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):50, 20

               
               
               Conread position:292-584
               
               
               Cow position:chr8:53746647-53746350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:212
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):49, 33

               
               
               Conread position:293-571
               
               
               Cow position:chr8:26315563-26315294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):10, 74

               
               
               Conread position:296-581
               
               
               Cow position:chr8:25271762-25272052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):37, 65

               
               
               Conread position:297-571
               
               
               Cow position:chr8:55247656-55247384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:204
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):45, 7

               
               
               Conread position:299-552
               
               
               Cow position:chr8:32278412-32278154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:194
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):52, 72

               
               
               Conread position:299-574
               
               
               Cow position:chr8:46743375-46743102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):33, 15

               
               
               Conread position:299-588
               
               
               Cow position:chr8:4656193-4655914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):86, 37

               
               
               Conread position:301-571
               
               
               Cow position:chr8:61845617-61845339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):31, 220

               
               
               Conread position:302-567
               
               
               Cow position:chr8:6248936-6248680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:183
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):82, 107

               
               
               Conread position:302-571
               
               
               Cow position:chr8:18171077-18170790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):33, 50

               
               
               Conread position:303-482
               
               
               Cow position:chr8:47500743-47500925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:303-570
               
               
               Cow position:chr8:36531661-36531390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):83, 39

               
               
               Conread position:304-576
               
               
               Cow position:chr8:55089908-55089642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):81, 179

               
               
               Conread position:305-570
               
               
               Cow position:chr8:58393505-58393767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):84, 30

               
               
               Conread position:305-571
               
               
               Cow position:chr8:5437705-5437971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:196
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):41, 199

               
               
               Conread position:305-574
               
               
               Cow position:chr8:60339974-60339715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):27, 15

               
               
               Conread position:307-571
               
               
               Cow position:chr8:9655522-9655783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):79, 7

               
               
               Conread position:309-584
               
               
               Cow position:chr8:52772878-52773156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):25, 41

               
               
               Conread position:313-571
               
               
               Cow position:chr8:4593426-4593164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):18, 30

               
               
               Conread position:313-571
               
               
               Cow position:chr8:37559082-37559334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):31, 22

               
               
               Conread position:314-577
               
               
               Cow position:chr8:5468140-5467867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:314-584
               
               
               Cow position:chr8:22600144-22599870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):28, 42

               
               
               Conread position:316-574
               
               
               Cow position:chr8:11863906-11864164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):61, 32

               
               
               Conread position:318-581
               
               
               Cow position:chr8:55070669-55070933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):15, 225

               
               
               Conread position:321-584
               
               
               Cow position:chr8:24870849-24870583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):65, 14

               
               
               Conread position:322-571
               
               
               Cow position:chr8:36299932-36299680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):63, 22

               
               
               Conread position:330-564
               
               
               Cow position:chr8:34060193-34059959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):56, 20

               
               
               Conread position:335-567
               
               
               Cow position:chr8:54061870-54062103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):51, 148

               
               
               Conread position:335-574
               
               
               Cow position:chr8:31265935-31265698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):10, 51

               
               
               Conread position:339-574
               
               
               Cow position:chr8:38639213-38639448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):47, 146

               
               
               Conread position:342-573
               
               
               Cow position:chr8:19616296-19616523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):47, 7

               
               
               Conread position:344-584
               
               
               Cow position:chr8:38643534-38643284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):45, 133

               
               
               Conread position:345-574
               
               
               Cow position:chr8:47410064-47410297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:347-581
               
               
               Cow position:chr8:3914575-3914816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):39, 121

               
               
               Conread position:350-498
               
               
               Cow position:chr8:43153703-43153556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):36, 133

               
               
               Conread position:350-571
               
               
               Cow position:chr8:3887319-3887541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):36, 192

               
               
               Conread position:351-585
               
               
               Cow position:chr8:5477863-5477631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):34, 134

               
               
               Conread position:360-584
               
               
               Cow position:chr8:55194170-55194397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:161
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):25, 212

               
               
               Conread position:364-579
               
               
               Cow position:chr8:23370305-23370102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:364-579
               
               
               Cow position:chr8:53587316-53587105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):22, 49

               
               
               Conread position:371-571
               
               
               Cow position:chr8:8714802-8714999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):25, 114

               
               
               Conread position:374-567
               
               
               Cow position:chr8:6675208-6675400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):12, 39

               
               
               Conread position:374-580
               
               
               Cow position:chr8:47679524-47679724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):59, 50

               
               
               Conread position:376-585
               
               
               Cow position:chr8:29934054-29934269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):10, 90

               
               
               Conread position:379-571
               
               
               Cow position:chr8:61848711-61848517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):7, 103

               
               
               Conread position:384-586
               
               
               Cow position:chr8:11216833-11216633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:393-571
               
               
               Cow position:chr8:24419246-24419076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:393-571
               
               
               Cow position:chr8:34820287-34820105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):79, 70

               
               
               Conread position:395-558
               
               
               Cow position:chr8:3793185-3793350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:395-567
               
               
               Cow position:chr8:25640068-25639899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:395-570
               
               
               Cow position:chr8:6160810-6160982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:130
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):70, 17

               
               
               Conread position:395-584
               
               
               Cow position:chr8:35452607-35452796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):93, 39

               
               
               Conread position:395-585
               
               
               Cow position:chr8:54306388-54306577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):105, 18

               
               
               Conread position:396-574
               
               
               Cow position:chr8:29173243-29173420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):103, 143

               
               
               Conread position:397-574
               
               
               Cow position:chr8:47707479-47707308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:131
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:398-574
               
               
               Cow position:chr8:50682138-50682315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):90, 159

               
               
               Conread position:399-571
               
               
               Cow position:chr8:39898734-39898896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:399-574
               
               
               Cow position:chr8:6477884-6478058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):51, 72

               
               
               Conread position:399-576
               
               
               Cow position:chr8:30868695-30868515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):91, 178

               
               
               Conread position:399-579
               
               
               Cow position:chr8:28210019-28210204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:400-556
               
               
               Cow position:chr8:35936803-35936957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:400-584
               
               
               Cow position:chr8:61554942-61554761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):44, 68

               
               
               Conread position:401-584
               
               
               Cow position:chr8:31902647-31902466 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:403-563
               
               
               Cow position:chr8:19227038-19226886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:403-571
               
               
               Cow position:chr8:19784899-19785068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):105, 77

               
               
               Conread position:403-582
               
               
               Cow position:chr8:11124525-11124343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):62, 57

               
               
               Conread position:408-583
               
               
               Cow position:chr8:51501240-51501065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:413-581
               
               
               Cow position:chr8:16053744-16053910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:413-583
               
               
               Cow position:chr8:5730083-5730251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):81, 69

               
               
               Conread position:413-586
               
               
               Cow position:chr8:35497632-35497461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):171, 71

               
               
               Conread position:424-581
               
               
               Cow position:chr8:23596701-23596550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:121
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:424-584
               
               
               Cow position:chr8:32968137-32968289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:425-567
               
               
               Cow position:chr8:46616450-46616591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:437-574
               
               
               Cow position:chr8:1141760-1141900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:106
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:437-585
               
               
               Cow position:chr8:20850281-20850136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):63, 45
Show alignments to all cow chromosomes.