Cow genome map

Conread name: Ss1.1-rste23_k1.5

Conread position: 1-73
Cow position:
Alignm length: 73
Alignm identity: 70
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 64-398
Cow position:
Alignm length: 345
Alignm identity: 218
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 7

Conread position: 64-473
Cow position:
Alignm length: 425
Alignm identity: 275
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 15

Conread position: 64-478
Cow position:
Alignm length: 429
Alignm identity: 269
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 11

Conread position: 70-478
Cow position:
Alignm length: 422
Alignm identity: 263
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 154

Conread position: 71-446
Cow position:
Alignm length: 390
Alignm identity: 248
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 170

Conread position: 71-457
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 151

Conread position: 71-478
Cow position:
Alignm length: 422
Alignm identity: 269
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 153

Conread position: 71-480
Cow position:
Alignm length: 423
Alignm identity: 264
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 153

Conread position: 71-480
Cow position:
Alignm length: 424
Alignm identity: 261
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 145

Conread position: 71-482
Cow position:
Alignm length: 427
Alignm identity: 266
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 87

Conread position: 71-483
Cow position:
Alignm length: 429
Alignm identity: 275
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 151

Conread position: 72-443
Cow position:
Alignm length: 385
Alignm identity: 239
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 11

Conread position: 72-480
Cow position:
Alignm length: 426
Alignm identity: 276
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 84

Conread position: 73-480
Cow position:
Alignm length: 422
Alignm identity: 262
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 149

Conread position: 73-521
Cow position:
Alignm length: 456
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 141

Conread position: 75-472
Cow position:
Alignm length: 413
Alignm identity: 265
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 149

Conread position: 76-478
Cow position:
Alignm length: 420
Alignm identity: 268
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 79

Conread position: 76-478
Cow position:
Alignm length: 417
Alignm identity: 259
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 148

Conread position: 76-479
Cow position:
Alignm length: 417
Alignm identity: 260
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 146

Conread position: 76-479
Cow position:
Alignm length: 418
Alignm identity: 271
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 148

Conread position: 76-480
Cow position:
Alignm length: 418
Alignm identity: 268
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 148

Conread position: 76-481
Cow position:
Alignm length: 422
Alignm identity: 266
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 148

Conread position: 76-484
Cow position:
Alignm length: 423
Alignm identity: 262
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 151

Conread position: 77-400
Cow position:
Alignm length: 334
Alignm identity: 211
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 141

Conread position: 77-457
Cow position:
Alignm length: 395
Alignm identity: 246
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 145

Conread position: 77-480
Cow position:
Alignm length: 418
Alignm identity: 261
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 145

Conread position: 78-446
Cow position:
Alignm length: 382
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 146

Conread position: 78-472
Cow position:
Alignm length: 410
Alignm identity: 254
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 93

Conread position: 78-473
Cow position:
Alignm length: 411
Alignm identity: 261
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 122

Conread position: 78-478
Cow position:
Alignm length: 415
Alignm identity: 262
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 146

Conread position: 78-478
Cow position:
Alignm length: 414
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 146

Conread position: 78-479
Cow position:
Alignm length: 417
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 152

Conread position: 78-479
Cow position:
Alignm length: 416
Alignm identity: 264
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 144

Conread position: 78-480
Cow position:
Alignm length: 416
Alignm identity: 256
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 146

Conread position: 78-480
Cow position:
Alignm length: 416
Alignm identity: 268
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 144

Conread position: 78-483
Cow position:
Alignm length: 420
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 181

Conread position: 78-483
Cow position:
Alignm length: 419
Alignm identity: 271
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 146

Conread position: 78-492
Cow position:
Alignm length: 429
Alignm identity: 270
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 146

Conread position: 78-504
Cow position:
Alignm length: 444
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 144

Conread position: 79-473
Cow position:
Alignm length: 408
Alignm identity: 258
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 140

Conread position: 79-478
Cow position:
Alignm length: 417
Alignm identity: 268
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 55

Conread position: 79-480
Cow position:
Alignm length: 416
Alignm identity: 260
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 168

Conread position: 79-480
Cow position:
Alignm length: 417
Alignm identity: 272
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 145

Conread position: 80-473
Cow position:
Alignm length: 408
Alignm identity: 258
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 171

Conread position: 80-473
Cow position:
Alignm length: 407
Alignm identity: 258
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 144

Conread position: 80-483
Cow position:
Alignm length: 423
Alignm identity: 266
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 52

Conread position: 82-452
Cow position:
Alignm length: 385
Alignm identity: 240
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 142

Conread position: 82-480
Cow position:
Alignm length: 413
Alignm identity: 262
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 142

Conread position: 82-483
Cow position:
Alignm length: 416
Alignm identity: 257
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 140

Conread position: 83-479
Cow position:
Alignm length: 412
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 141

Conread position: 83-479
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 141

Conread position: 83-482
Cow position:
Alignm length: 414
Alignm identity: 267
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 44, 141

Conread position: 83-483
Cow position:
Alignm length: 416
Alignm identity: 259
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 141

Conread position: 84-478
Cow position:
Alignm length: 409
Alignm identity: 262
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 131

Conread position: 84-478
Cow position:
Alignm length: 408
Alignm identity: 250
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 140

Conread position: 85-479
Cow position:
Alignm length: 408
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 14

Conread position: 89-444
Cow position:
Alignm length: 372
Alignm identity: 239
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 141

Conread position: 89-472
Cow position:
Alignm length: 397
Alignm identity: 247
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 135

Conread position: 93-472
Cow position:
Alignm length: 394
Alignm identity: 245
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 93

Conread position: 93-473
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 82

Conread position: 93-474
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 154

Conread position: 93-483
Cow position:
Alignm length: 405
Alignm identity: 252
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 159

Conread position: 93-483
Cow position:
Alignm length: 405
Alignm identity: 251
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 131

Conread position: 126-483
Cow position:
Alignm length: 372
Alignm identity: 238
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 126

Conread position: 243-488
Cow position:
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 65

Conread position: 249-478
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 64

Conread position: 250-471
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 58

Conread position: 254-479
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 76

Conread position: 257-494
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 55

Conread position: 277-483
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 36

Show alignments to all cow chromosomes.